BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0132.0008.p (316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08868236.1| Conjugal transfer protein traG [Azospirillum ... 487 e-135 ref|YP_004554880.1| TRAG family protein [Sphingobium chloropheno... 485 e-135 ref|YP_001683651.1| conjugal transfer coupling protein TraG [Cau... 482 e-134 ref|YP_003853940.1| conjugal transfer protein TraG [Parvularcula... 481 e-134 ref|YP_001413107.1| conjugal transfer coupling protein TraG [Par... 480 e-133 >ref|ZP_08868236.1| Conjugal transfer protein traG [Azospirillum amazonense Y2] gb|EGY02168.1| Conjugal transfer protein traG [Azospirillum amazonense Y2] Length = 674 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/292 (79%), Positives = 260/292 (89%) Query: 1 MCFAPTRSGKGVGLVLPTLLSWTSSAVVHDIKGENWELTSGWRSTFSHCLLFNPTDSASA 60 M FAPTRSGKGVGLV+PTLLSWT+SAV+HDIKGENW+LT+GWR++FSHCLLFNPTD SA Sbjct: 148 MAFAPTRSGKGVGLVVPTLLSWTASAVIHDIKGENWQLTAGWRASFSHCLLFNPTDPRSA 207 Query: 61 RYNPLLEVRKGAAEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGVILHVLYAEQQK 120 RYNPLLEVRKG EVRDVQNIADILVDPEGALERRSHWEKTSHSLLVG ILHVLYAE++K Sbjct: 208 RYNPLLEVRKGPDEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGAILHVLYAEEEK 267 Query: 121 TLTRVTEILADPAQSFEKTLRIMLATNHLGTEAEPKVHPVVAATARELLNKSENERSGVL 180 TL RV L+DP +SF TLR M+ATNHLGT +P+VHPVVA+ ARE+LNKSENERSGVL Sbjct: 268 TLARVATFLSDPRRSFAHTLRRMMATNHLGTPDKPQVHPVVASAAREVLNKSENERSGVL 327 Query: 181 STAVSFLGLYRDPVVSRNTESCDWRIADLVGADRPVTLYLVVPPSDISRTKPLIRLILNQ 240 STA+SFLGLYRDP V+ T +CDWRIADLV A RPV+LYLV+PPSDISRTKPL+RL+LNQ Sbjct: 328 STAMSFLGLYRDPTVAATTSACDWRIADLVDAPRPVSLYLVIPPSDISRTKPLVRLVLNQ 387 Query: 241 IGRRLTESLNVRAGDAKHRQLLLMLDEFPALGRLDFFESALAFMAGYGIRAY 292 IGRRLTE L G + +LL+MLDEFPALGRLDFFE+ALAFMAGYGIRAY Sbjct: 388 IGRRLTERLEGDPGKRRRHELLMMLDEFPALGRLDFFETALAFMAGYGIRAY 439 >ref|YP_004554880.1| TRAG family protein [Sphingobium chlorophenolicum L-1] gb|AEG50374.1| TRAG family protein [Sphingobium chlorophenolicum L-1] Length = 681 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/292 (79%), Positives = 257/292 (88%) Query: 1 MCFAPTRSGKGVGLVLPTLLSWTSSAVVHDIKGENWELTSGWRSTFSHCLLFNPTDSASA 60 M FAPTRSGKGVGLV+P+LLSWT S VVHDIKGENW+LT+GWRS FSHCLLFNPTD SA Sbjct: 148 MAFAPTRSGKGVGLVVPSLLSWTGSTVVHDIKGENWQLTAGWRSRFSHCLLFNPTDPRSA 207 Query: 61 RYNPLLEVRKGAAEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGVILHVLYAEQQK 120 RYNPLLEVRKG EVRDVQNIADILVDPEGALERRSHWEKTSHSLLVG ILHVLYAE++K Sbjct: 208 RYNPLLEVRKGPDEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGAILHVLYAEEEK 267 Query: 121 TLTRVTEILADPAQSFEKTLRIMLATNHLGTEAEPKVHPVVAATARELLNKSENERSGVL 180 TL RV L+DP +SF TLR M+ATNHLGT P+VHPVVA+ ARE+LNKSENERSGVL Sbjct: 268 TLARVATFLSDPRRSFAHTLRRMMATNHLGTREHPQVHPVVASAAREVLNKSENERSGVL 327 Query: 181 STAVSFLGLYRDPVVSRNTESCDWRIADLVGADRPVTLYLVVPPSDISRTKPLIRLILNQ 240 STA+SFLGLYRDP+V+RNT +CDWRIADLV PV+LYLV+PPSDISRTKPL+RL+LNQ Sbjct: 328 STAMSFLGLYRDPIVARNTAACDWRIADLVDGTVPVSLYLVIPPSDISRTKPLVRLVLNQ 387 Query: 241 IGRRLTESLNVRAGDAKHRQLLLMLDEFPALGRLDFFESALAFMAGYGIRAY 292 IGRRLTE L ++ QLL+MLDEFPALGRLDFFE+ALAFMAGYGIRAY Sbjct: 388 IGRRLTERLEGDPRKSRKHQLLMMLDEFPALGRLDFFETALAFMAGYGIRAY 439 >ref|YP_001683651.1| conjugal transfer coupling protein TraG [Caulobacter sp. K31] gb|ABZ71153.1| TRAG family protein [Caulobacter sp. K31] Length = 678 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/292 (79%), Positives = 255/292 (87%) Query: 1 MCFAPTRSGKGVGLVLPTLLSWTSSAVVHDIKGENWELTSGWRSTFSHCLLFNPTDSASA 60 M FAPTRSGKGVGLV P+LLSWT SAVVHDIKGENW LT+GWR+ FSHCLLFNPTD+ SA Sbjct: 148 MAFAPTRSGKGVGLVAPSLLSWTGSAVVHDIKGENWTLTAGWRARFSHCLLFNPTDARSA 207 Query: 61 RYNPLLEVRKGAAEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGVILHVLYAEQQK 120 RYNPLLEVRKG EVRDVQNIAD+LVDPEGALERRSHWEKTSHSLLVG ILHVLYAE++K Sbjct: 208 RYNPLLEVRKGPDEVRDVQNIADVLVDPEGALERRSHWEKTSHSLLVGAILHVLYAEEEK 267 Query: 121 TLTRVTEILADPAQSFEKTLRIMLATNHLGTEAEPKVHPVVAATARELLNKSENERSGVL 180 TL RV L+DP +SF TLR M+ATNHLGT PKVHPVVA+ ARE+LNK+ENERSGVL Sbjct: 268 TLARVATFLSDPQRSFAHTLRRMMATNHLGTPQAPKVHPVVASAAREVLNKAENERSGVL 327 Query: 181 STAVSFLGLYRDPVVSRNTESCDWRIADLVGADRPVTLYLVVPPSDISRTKPLIRLILNQ 240 STA+SFLGLYRDP V+ T +CDWRIADLV A PVTLYLV+PPSDISRTKPL+RL+LNQ Sbjct: 328 STAMSFLGLYRDPTVALTTSACDWRIADLVDAPSPVTLYLVIPPSDISRTKPLVRLVLNQ 387 Query: 241 IGRRLTESLNVRAGDAKHRQLLLMLDEFPALGRLDFFESALAFMAGYGIRAY 292 IGRRLTE L ++ QLL+MLDEFPALGRLDFFE+ALAFMAGYGIRAY Sbjct: 388 IGRRLTERLEGDPKKSRKHQLLMMLDEFPALGRLDFFETALAFMAGYGIRAY 439 >ref|YP_003853940.1| conjugal transfer protein TraG [Parvularcula bermudensis HTCC2503] gb|ADM08798.1| conjugal transfer protein traG [Parvularcula bermudensis HTCC2503] Length = 662 Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/292 (77%), Positives = 259/292 (88%) Query: 1 MCFAPTRSGKGVGLVLPTLLSWTSSAVVHDIKGENWELTSGWRSTFSHCLLFNPTDSASA 60 M FAPTRSGKGVGLV+PTLLSWT SAV+HDIKGENW+LTSGWRS FSHCLLF+PT++ SA Sbjct: 135 MAFAPTRSGKGVGLVVPTLLSWTQSAVIHDIKGENWQLTSGWRSKFSHCLLFDPTNAGSA 194 Query: 61 RYNPLLEVRKGAAEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGVILHVLYAEQQK 120 +YNPLLEVRKGA EVRDVQNIADILVDPEGALERR+HWEKT H+LLVG ILHVLYAE++K Sbjct: 195 KYNPLLEVRKGANEVRDVQNIADILVDPEGALERRTHWEKTGHALLVGAILHVLYAEKEK 254 Query: 121 TLTRVTEILADPAQSFEKTLRIMLATNHLGTEAEPKVHPVVAATARELLNKSENERSGVL 180 TL +V L+DP + FEKTL +M++TNHLG + E + HPVVA ARELLNKSENERSGVL Sbjct: 255 TLAQVARFLSDPDRPFEKTLWVMMSTNHLGDDGEARPHPVVAQAARELLNKSENERSGVL 314 Query: 181 STAVSFLGLYRDPVVSRNTESCDWRIADLVGADRPVTLYLVVPPSDISRTKPLIRLILNQ 240 STA+SFLGLYRDP V+ T +CDWRIADL+ A +PV+LYLVVPPSDISRTKPL+RLILNQ Sbjct: 315 STAMSFLGLYRDPTVAEVTSACDWRIADLIDAQKPVSLYLVVPPSDISRTKPLVRLILNQ 374 Query: 241 IGRRLTESLNVRAGDAKHRQLLLMLDEFPALGRLDFFESALAFMAGYGIRAY 292 IGRRLTE L+ + + RQ+LLMLDEFPALGRLDFFESALAFMAGYG+RA+ Sbjct: 375 IGRRLTEKLDGQIDGDRRRQVLLMLDEFPALGRLDFFESALAFMAGYGLRAF 426 >ref|YP_001413107.1| conjugal transfer coupling protein TraG [Parvibaculum lavamentivorans DS-1] gb|ABS63450.1| TRAG family protein [Parvibaculum lavamentivorans DS-1] Length = 687 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 229/292 (78%), Positives = 256/292 (87%) Query: 1 MCFAPTRSGKGVGLVLPTLLSWTSSAVVHDIKGENWELTSGWRSTFSHCLLFNPTDSASA 60 M FAPTRSGKGVGLV+PTLLSWT SAV+HDIKGENW+LT+GWRS FSHCLLFNPTD SA Sbjct: 148 MAFAPTRSGKGVGLVVPTLLSWTGSAVIHDIKGENWQLTAGWRSRFSHCLLFNPTDPRSA 207 Query: 61 RYNPLLEVRKGAAEVRDVQNIADILVDPEGALERRSHWEKTSHSLLVGVILHVLYAEQQK 120 RYNPLLEVRKG EVRDVQNIADILVDPEGALERR+HWEKTSH+LLVG ILHVLYAE++K Sbjct: 208 RYNPLLEVRKGPDEVRDVQNIADILVDPEGALERRNHWEKTSHALLVGAILHVLYAEEEK 267 Query: 121 TLTRVTEILADPAQSFEKTLRIMLATNHLGTEAEPKVHPVVAATARELLNKSENERSGVL 180 TL RV +L+DP +SFE TLR M+ATNHLGT P+VHPVVA+ ARE+LNKS+NERSGVL Sbjct: 268 TLARVATLLSDPRRSFEHTLRAMMATNHLGTPEHPEVHPVVASAAREVLNKSDNERSGVL 327 Query: 181 STAVSFLGLYRDPVVSRNTESCDWRIADLVGADRPVTLYLVVPPSDISRTKPLIRLILNQ 240 STA+SFLGLYRDP+V+ +CDWRIADLV A RPV+LYLV+PP+DISRTKPL RL+LNQ Sbjct: 328 STAMSFLGLYRDPIVAATISACDWRIADLVDAARPVSLYLVIPPADISRTKPLARLVLNQ 387 Query: 241 IGRRLTESLNVRAGDAKHRQLLLMLDEFPALGRLDFFESALAFMAGYGIRAY 292 IGRRLTE L + LL+MLDEFPALGRLDFFE+ALAFMAGYGIRAY Sbjct: 388 IGRRLTEKLEGDPAKRRRYGLLMMLDEFPALGRLDFFETALAFMAGYGIRAY 439