BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0132.0005.p (575 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003692814.1| integrase family protein [Starkeya novella D... 443 e-122 ref|ZP_02166815.1| site-specific recombinase, phage integrase fa... 440 e-121 ref|YP_001412328.1| integrase family protein [Parvibaculum lavam... 436 e-120 ref|YP_004612959.1| integrase family protein [Mesorhizobium oppo... 427 e-117 ref|ZP_08072511.1| integrase family protein [Methylocystis sp. A... 420 e-115 >ref|YP_003692814.1| integrase family protein [Starkeya novella DSM 506] gb|ADH88195.1| integrase family protein [Starkeya novella DSM 506] Length = 353 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 211/353 (59%), Positives = 272/353 (77%), Gaps = 2/353 (0%) Query: 1 MPTFTKLKSGSWRVQVRRKNEYVANTFIRRRDAEEWAIDVERSIDRGTPIRRSRSHEQPR 60 M TFTKLKSGSWR Q+RRK +YV+ TF+RR+DAEEWA+D+ER IDR P +S + R Sbjct: 1 MATFTKLKSGSWRAQIRRKGQYVSETFLRRKDAEEWALDMERRIDRQEPAITRKSRDAKR 60 Query: 61 IFFDLIALHLDDLAQVGKPVRRSKFMVLKALKTSLGRVNIKDITREKLIDFGKKRAAQGA 120 F DL+ALH D+A+VG + RSK L AL LG + I D+ RE+LI +G+ RA +GA Sbjct: 61 -FRDLVALHRQDMAEVGVRIGRSKDFCLTALDERLGALKIADLDRERLIKYGRDRAKEGA 119 Query: 121 GPATLAIDFSFIRAVLLHAAAVHGITVSVENVQLARAALKHLDLVGKSNERDRRPTQDEL 180 GP T+++DF +I+ VL HAAAVHG+T+S E + LAR ALK L L+GK ERDRRPTQDEL Sbjct: 120 GPVTVSMDFGYIKTVLSHAAAVHGVTLSTEPLDLARIALKRLGLIGKGKERDRRPTQDEL 179 Query: 181 NRLIEYTESNPLQFIPLGRIIRFAVATAMRQAEICRIEWSDVDMTKRTVTIRDRKDPRRK 240 +R+I + NP Q IP+GRI+RFAVATAMRQ EICR+EW D D R + IRDRKDPRRK Sbjct: 180 DRIITALDENPRQSIPVGRIVRFAVATAMRQEEICRVEWRDFDPRTRMLLIRDRKDPRRK 239 Query: 241 DGNHQIVPLLNSTGYDAWQLVLEQRVVTRG-IGRVFPHHSKSIGATFRRSCKNIDLDDLC 299 DGNHQ +PLL+ +GYDA +++ EQ + G GR+FP++ +S+G FRR C+++ +++L Sbjct: 240 DGNHQRIPLLDVSGYDACEIIEEQARCSNGREGRIFPYNGRSVGTAFRRQCQDLKIEELH 299 Query: 300 FHDLRHEGTSRLFEAGYSIQQVAMVTGHKDWRMLRRYTNLKPEDLHKVQEGRA 352 FHDLRHEGTSRLFEAG++I+QVA+VTGHKDW+MLRRYT+LKPE LH ++ RA Sbjct: 300 FHDLRHEGTSRLFEAGFTIEQVALVTGHKDWKMLRRYTHLKPEALHTIRAARA 352 >ref|ZP_02166815.1| site-specific recombinase, phage integrase family protein [Hoeflea phototrophica DFL-43] gb|EDQ33613.1| site-specific recombinase, phage integrase family protein [Hoeflea phototrophica DFL-43] Length = 364 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 210/348 (60%), Positives = 270/348 (77%), Gaps = 1/348 (0%) Query: 1 MPTFTKLKSGSWRVQVRRKNEYVANTFIRRRDAEEWAIDVERSIDRGTPIRRSRSHEQPR 60 M T K + G WR QVRRK +YV+NTF + A EW D+E ID G +R +S + + Sbjct: 1 MATIFKTRQGHWRAQVRRKGKYVSNTFRLKTQAHEWVRDIEHLIDIGGEPKR-QSGRRAQ 59 Query: 61 IFFDLIALHLDDLAQVGKPVRRSKFMVLKALKTSLGRVNIKDITREKLIDFGKKRAAQGA 120 L+ LHL+DL +VG+ +RRSK V++ALK LG V I + R +LI +GK+RAA+GA Sbjct: 60 TVGALVDLHLEDLKEVGRAIRRSKMAVMEALKRDLGTVRIDRLDRARLIQYGKQRAAEGA 119 Query: 121 GPATLAIDFSFIRAVLLHAAAVHGITVSVENVQLARAALKHLDLVGKSNERDRRPTQDEL 180 GP TLA+D S++R VL HAAAVHG+ V E+++LAR AL L LVG+S+ERDRRPT+DE+ Sbjct: 120 GPVTLAVDLSYLRTVLTHAAAVHGVHVDTESIRLARTALARLGLVGRSHERDRRPTEDEI 179 Query: 181 NRLIEYTESNPLQFIPLGRIIRFAVATAMRQAEICRIEWSDVDMTKRTVTIRDRKDPRRK 240 + L+ Y ++ IP+GRI+RFA+ATAMRQ E+C+IEWSDVD++KR VTIR+RKDPR K Sbjct: 180 DALLGYFDNKTNMIIPMGRIVRFAIATAMRQEEVCKIEWSDVDLSKRVVTIRNRKDPRNK 239 Query: 241 DGNHQIVPLLNSTGYDAWQLVLEQRVVTRGIGRVFPHHSKSIGATFRRSCKNIDLDDLCF 300 +GNHQ VPLLN TG DAWQL+LEQ+V+T GIGR FP+HSKS+G FRR+ K++ ++DL F Sbjct: 240 EGNHQKVPLLNLTGIDAWQLLLEQKVLTGGIGRCFPYHSKSVGTAFRRARKHLGIEDLRF 299 Query: 301 HDLRHEGTSRLFEAGYSIQQVAMVTGHKDWRMLRRYTNLKPEDLHKVQ 348 HDLRHE TSRLFEAG SI++VA+VTGHKDW+MLRRYT+LKPEDLHK Q Sbjct: 300 HDLRHEATSRLFEAGLSIERVALVTGHKDWKMLRRYTHLKPEDLHKEQ 347 >ref|YP_001412328.1| integrase family protein [Parvibaculum lavamentivorans DS-1] gb|ABS62671.1| integrase family protein [Parvibaculum lavamentivorans DS-1] Length = 380 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 207/352 (58%), Positives = 264/352 (75%), Gaps = 1/352 (0%) Query: 1 MPTFTKLKSGSWRVQVRRKNEYVANTFIRRRDAEEWAIDVERSIDRGTPIRRSRSHEQPR 60 M T KL SG+WRVQVRRK Y+A TF R ++AE WA+D+ER ID+G + SR+ ++P Sbjct: 1 MATVKKLPSGNWRVQVRRKGRYIAETFRRHKEAEAWALDMERRIDQGE-VPSSRTRKKPT 59 Query: 61 IFFDLIALHLDDLAQVGKPVRRSKFMVLKALKTSLGRVNIKDITREKLIDFGKKRAAQGA 120 F DLI LHL L +VG+ RRSK L ALK LG+V + D+ RE+LI FGK+R +GA Sbjct: 60 TFGDLIDLHLAALQEVGRSPRRSKAFTLDALKAKLGKVRMADLNRERLIRFGKERLKEGA 119 Query: 121 GPATLAIDFSFIRAVLLHAAAVHGITVSVENVQLARAALKHLDLVGKSNERDRRPTQDEL 180 GP T+ +D S+I+ ++ HAAAVHGI VS E V LAR ALKHL +VG+S RDRRPT DEL Sbjct: 120 GPVTVGMDLSYIKTIITHAAAVHGIAVSPEAVDLARTALKHLGVVGRSRSRDRRPTADEL 179 Query: 181 NRLIEYTESNPLQFIPLGRIIRFAVATAMRQAEICRIEWSDVDMTKRTVTIRDRKDPRRK 240 RLI Y ++NP Q IPL RIIRFAVATAMRQ EICRI W D+D RTV IRDRKDPR Sbjct: 180 KRLIAYFDANPRQLIPLARIIRFAVATAMRQDEICRIRWGDIDADTRTVLIRDRKDPRET 239 Query: 241 DGNHQIVPLLNSTGYDAWQLVLEQRVVTRGIGRVFPHHSKSIGATFRRSCKNIDLDDLCF 300 DGN Q VPLL +TG+DAW ++ EQ+ R+FP++++S+G FRR+C+++ +++L F Sbjct: 240 DGNDQKVPLLAATGFDAWAILREQKTAVAKGDRIFPYNARSVGTAFRRACRDLKIENLHF 299 Query: 301 HDLRHEGTSRLFEAGYSIQQVAMVTGHKDWRMLRRYTNLKPEDLHKVQEGRA 352 HDLRHEG SRLFEAG++I+QVA+VTGH+DW+ML+RYTNL+PE LH+ RA Sbjct: 300 HDLRHEGASRLFEAGFTIEQVALVTGHRDWKMLKRYTNLRPEHLHRFDTPRA 351 >ref|YP_004612959.1| integrase family protein [Mesorhizobium opportunistum WSM2075] gb|AEH88865.1| integrase family protein [Mesorhizobium opportunistum WSM2075] Length = 353 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 213/353 (60%), Positives = 258/353 (73%), Gaps = 2/353 (0%) Query: 1 MPTFTKLKSGSWRVQVRRKNEYVANTFIRRRDAEEWAIDVERSIDRGTPIRRSRSHEQPR 60 M T+TKL SGSWRVQVRRK YV+ TF+RR DA WA + ER +DRG +SR + + Sbjct: 1 MATYTKLSSGSWRVQVRRKGRYVSETFLRRDDARRWATETERQVDRGETPTKSRV-ARLK 59 Query: 61 IFFDLIALHLDDLAQVGKPVRRSKFMVLKALKTSLGRVNIKDITREKLIDFGKKRAAQGA 120 F +LI LH+DD+ VGK RRSK L L+ LG+ NI + RE+LI FG+ RAAQGA Sbjct: 60 TFGELIDLHIDDMCDVGKSPRRSKAAALDMLQRHLGKCNISALDRERLIRFGRDRAAQGA 119 Query: 121 GPATLAIDFSFIRAVLLHAAAVHGITVSVENVQLARAALKHLDLVGKSNERDRRPTQDEL 180 GP TL ID FI+ VL HAAAVHG+ V VE V AR ALK L LVGK ERDRRPTQDEL Sbjct: 120 GPMTLGIDIGFIKLVLSHAAAVHGLPVKVEPVDFARMALKRLGLVGKGCERDRRPTQDEL 179 Query: 181 NRLIEYTESNPLQFIPLGRIIRFAVATAMRQAEICRIEWSDVDMTKRTVTIRDRKDPRRK 240 +RLI + ESNPLQ P+GRIIRFAVATAMRQ EIC+ WSD++ R + IRDRKDPR K Sbjct: 180 DRLIAHFESNPLQKTPVGRIIRFAVATAMRQEEICKARWSDLESRTRMLLIRDRKDPRNK 239 Query: 241 DGNHQIVPLLNSTGYDAWQLVLEQRVV-TRGIGRVFPHHSKSIGATFRRSCKNIDLDDLC 299 GN+Q +PL +TGYDAW +V EQR + R+FP + +S+G FRR C ++ + DL Sbjct: 240 KGNNQRIPLFAATGYDAWAIVEEQRAKRSNDDDRIFPFNHRSVGTAFRRGCADLSIHDLH 299 Query: 300 FHDLRHEGTSRLFEAGYSIQQVAMVTGHKDWRMLRRYTNLKPEDLHKVQEGRA 352 FHDLRHEGTSRLFEAG++I+QVA+VTGHKDW+MLRRYT+LKPE LH + +A Sbjct: 300 FHDLRHEGTSRLFEAGFTIEQVALVTGHKDWKMLRRYTHLKPEMLHTIHAAKA 352 >ref|ZP_08072511.1| integrase family protein [Methylocystis sp. ATCC 49242] gb|EFX99943.1| integrase family protein [Methylocystis sp. ATCC 49242] Length = 353 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 206/354 (58%), Positives = 262/354 (74%), Gaps = 4/354 (1%) Query: 1 MPTFTKLKSGSWRVQVRRKNEYVANTFIRRRDAEEWAIDVERSIDRG-TPIRRSRSHEQP 59 M TFTKLKSGSWRVQVRRK +YV +F+RRRDAEEWA+D+ER IDRG +P +R R Sbjct: 1 MATFTKLKSGSWRVQVRRKGKYVNESFLRRRDAEEWALDIERRIDRGESPTKRVR--RDA 58 Query: 60 RIFFDLIALHLDDLAQVGKPVRRSKFMVLKALKTSLGRVNIKDITREKLIDFGKKRAAQG 119 + F DL+ LH DDL VG+ + RSK L L+ LG + + RE+LI FG+ RA +G Sbjct: 59 KTFGDLVRLHRDDLRDVGRQIGRSKSASLVFLERRLGTCKLGGLDRERLIQFGRDRAKEG 118 Query: 120 AGPATLAIDFSFIRAVLLHAAAVHGITVSVENVQLARAALKHLDLVGKSNERDRRPTQDE 179 AGP TL ID +I+ +L HAAAVHG+ VS+E + LAR AL L LVGK ERDRRPTQDE Sbjct: 119 AGPVTLGIDLGYIKTILSHAAAVHGVQVSMEPIDLARIALGRLGLVGKGTERDRRPTQDE 178 Query: 180 LNRLIEYTESNPLQFIPLGRIIRFAVATAMRQAEICRIEWSDVDMTKRTVTIRDRKDPRR 239 ++R+I ++NP Q IP+GRI+RFA+ATAMRQ EI RI W D D ++ + IRDRKDPR+ Sbjct: 179 IDRIIASFDNNPRQHIPVGRIVRFAIATAMRQDEISRIRWEDFDPAEKMLLIRDRKDPRK 238 Query: 240 KDGNHQIVPLLNSTGYDAWQLVLEQRVVTR-GIGRVFPHHSKSIGATFRRSCKNIDLDDL 298 K GN+Q +PLL YD ++ EQR ++R GR+FP++ KS+G FRR C+ + ++DL Sbjct: 239 KSGNNQRIPLLTIRDYDPCAIIEEQRSISRTSEGRIFPYNGKSVGTAFRRQCRELKIEDL 298 Query: 299 CFHDLRHEGTSRLFEAGYSIQQVAMVTGHKDWRMLRRYTNLKPEDLHKVQEGRA 352 FHDLRHEGTSRLFEAG+SI+QVA+VTGHKDW+MLRRYT+L+PE LH + RA Sbjct: 299 HFHDLRHEGTSRLFEAGFSIEQVALVTGHKDWKMLRRYTHLRPEALHGISVIRA 352