BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0131.0016.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_534267.1| DeoR family transcriptional regulator [Rhodopse... 423 e-116 ref|ZP_06895900.1| DeoR family transcriptional regulator [Roseom... 233 3e-59 ref|YP_004472149.1| DeoR family transcriptional regulator [Pseud... 200 2e-49 ref|YP_001774553.1| DeoR family transcriptional regulator [Burkh... 199 2e-49 ref|YP_839923.1| DeoR family transcriptional regulator [Burkhold... 199 3e-49 >ref|YP_534267.1| DeoR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD89948.1| transcriptional regulator, DeoR family [Rhodopseudomonas palustris BisB18] Length = 258 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 222/253 (87%), Positives = 235/253 (92%) Query: 1 MRSKERHARLLEALNAGEIDVDDLARRFDVSASTVRRDLQHLSKNNAVRRTYGGAILTAH 60 MRSKERHARLLEALNAGEID+DDLARRF+VSASTVRRDLQ LSK NAVRRTYGGAILT H Sbjct: 3 MRSKERHARLLEALNAGEIDIDDLARRFEVSASTVRRDLQQLSKINAVRRTYGGAILTGH 62 Query: 61 ANETTLEQRLAVQGKQKQAIARAAIDLIEDGDTLILDAGSTVAAFGRLLQQRRLRIITNN 120 A ETT EQRLAV G KQAIARAAI+LIEDGDTLILDAGSTVAAF RLL QRRLRIITNN Sbjct: 63 AIETTFEQRLAVDGDAKQAIARAAIELIEDGDTLILDAGSTVAAFSRLLLQRRLRIITNN 122 Query: 121 LALLPFLAKAPTLELVVLGGALRATSMSTMGPLANEALRRMTADRAVMSADGVVNGRGLC 180 LALLPFLAKAP +ELVVLGGALR+TSMSTMGPLANEALRR++A RA+MSADGVV GRGLC Sbjct: 123 LALLPFLAKAPAIELVVLGGALRSTSMSTMGPLANEALRRLSATRAIMSADGVVGGRGLC 182 Query: 181 EADLEQVALKSLMMQHSKEVIVLADASKLGRAEQMAWAPLPPRWTLVTDVGASEEQCKRL 240 EADLEQVALKSLMMQ +KE+IVLADASKLGRAEQ+AWAPLPPRWTLVTD GASE+Q +RL Sbjct: 183 EADLEQVALKSLMMQQAKELIVLADASKLGRAEQLAWAPLPPRWTLVTDAGASEQQRQRL 242 Query: 241 ADAGARVIVAGVC 253 ADAGARVIVA C Sbjct: 243 ADAGARVIVAQGC 255 >ref|ZP_06895900.1| DeoR family transcriptional regulator [Roseomonas cervicalis ATCC 49957] gb|EFH12397.1| DeoR family transcriptional regulator [Roseomonas cervicalis ATCC 49957] Length = 257 Score = 233 bits (593), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 141/253 (55%), Positives = 171/253 (67%), Gaps = 7/253 (2%) Query: 1 MRSKE-RHARLLEALNAGEIDVDDLARRFDVSASTVRRDLQHLSKNNAVRRTYGGAILTA 59 MR K R +L AL AG DV+ LA RF VSAST+RRDLQ LS + + RTYGGA+L Sbjct: 1 MRQKRARRDEILTALEAGSADVEALAARFGVSASTIRRDLQDLSAQHPIARTYGGAMLAG 60 Query: 60 HANETTLEQRLAVQGKQKQAIARAAIDLIEDGDTLILDAGSTVAAFGR----LLQQRRLR 115 A E +L R + K AIA AA+ L+ +G+TLILD GSTV A GR L RRLR Sbjct: 61 SAVEQSLGTRATQRRPAKAAIAEAALALLAEGETLILDGGSTVEALGRRLPGWLSGRRLR 120 Query: 116 IITNNLALLPFLAKAPTLELVVLGGALRATSMSTMGPLANEALRRMTADRAVMSADGVVN 175 +ITNNL L+P LA AP LEL+VLGG +R SM T GP A ++LR+M+ADR SADG++ Sbjct: 121 VITNNLPLIPVLAGAPGLELIVLGGVVRPISMGTTGPFAEQSLRQMSADRLFTSADGLLP 180 Query: 176 GRGLCEADLEQVALKSLMMQHSKEVIVLADASKLGRAEQMAWAPLPPRWTLVTDVGASEE 235 G GLCEA EQV+LKSLMM+ + V+VLADASKLG+ +Q WAPLPP LVTD A+E Sbjct: 181 GYGLCEATPEQVSLKSLMMRQAASVVVLADASKLGQGKQPFWAPLPPGAVLVTD--AAEA 238 Query: 236 QCKRLADAGARVI 248 +C G RVI Sbjct: 239 ECAPYRAEGLRVI 251 >ref|YP_004472149.1| DeoR family transcriptional regulator [Pseudomonas fulva 12-X] gb|AEF20055.1| transcriptional regulator, DeoR family [Pseudomonas fulva 12-X] Length = 253 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 112/239 (46%), Positives = 155/239 (64%), Gaps = 5/239 (2%) Query: 1 MRSKERHARLLEAL--NAGEIDVDDLARRFDVSASTVRRDLQHLSKNNAVRRTYGGAI-L 57 M+ +R +LE + N G ++V+ L VS +TVRRDL L++ + RTYGGA + Sbjct: 1 MKVAKRRQAILELVLSNNGNVNVETLCSSLGVSEATVRRDLASLAEQGMIMRTYGGAAHI 60 Query: 58 TAHANETTLEQRLAVQGKQKQAIARAAIDLIEDGDTLILDAGSTVAAFGRLLQQRR-LRI 116 HA E +LE+R + +K+ IARAA+ ++D DT++LD G++ A+ RLL++R L + Sbjct: 61 GKHAPEASLEERSSHSSLEKERIARAALAHVQDNDTVLLDGGTSTASLARLLRERTGLHV 120 Query: 117 ITNNLALLPFLAKAPTLELVVLGGALRATSMSTMGPLANEALRRMTADRAVMSADGVVNG 176 ITNNL L L + P + VLGG LR SM+T GP A L R++AD+ +SADGVV G Sbjct: 121 ITNNLLALESLHELPQGRVTVLGGDLRPGSMATFGPAAMAMLERLSADKVFVSADGVVAG 180 Query: 177 RGLCEADLEQVALKSLMMQHSKEVIVLADASKLGRAEQMAWAPLPPRWTLVTDVGASEE 235 RGLCEA Q LK LM++ + EV VLADASKLGR +Q W PL RWTL+T G++E+ Sbjct: 181 RGLCEASASQAYLKDLMIRQAAEVFVLADASKLGRDQQQYWTPLNTRWTLIT-TGSAEQ 238 >ref|YP_001774553.1| DeoR family transcriptional regulator [Burkholderia cenocepacia MC0-3] gb|ACA96058.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia MC0-3] Length = 268 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 117/254 (46%), Positives = 156/254 (61%), Gaps = 4/254 (1%) Query: 1 MRSKERHARLLEALNAGEIDVDDLARRFDVSASTVRRDLQHLSKNNAVRRTYGGAI-LTA 59 M+ R +L+A+ G DV L F +S +TVRRDL+ L+ + + RTYGGA + Sbjct: 1 MKVTRRREAMLQAVLGGMTDVATLCEHFGMSEATVRRDLRALASDRRILRTYGGAAAVGG 60 Query: 60 HANETTLEQRLAVQGKQKQAIARAAIDLIEDGDTLILDAGSTVAAFGRLLQQRR-LRIIT 118 H E +LE+R +QK+AIA AA +EDGDT+ LD G+T AA RLL R + ++T Sbjct: 61 HEPEPSLEERRVSSQEQKEAIAHAASSFVEDGDTVFLDGGTTTAALARLLAGRTDVHVVT 120 Query: 119 NNLALLPFLAKAPTLELVVLGGALRATSMSTMGPLANEALRRMTADRAVMSADGVVNGRG 178 NNL ++ L + + + V+GG +R++SMST+GPLA AL R++ D+A + ADGVV G Sbjct: 121 NNLLVVSPLVSS-GVHVTVIGGDVRSSSMSTLGPLAQIALSRLSVDKAFLGADGVVAELG 179 Query: 179 LCEADLEQVALKSLMMQHSKEVIVLADASKLGRAEQMAWAPLPPRWTLVTDVGASEEQCK 238 LCEA EQ LK +M+ + EV VL A KLGRA Q W PL WTLVTD GA EQ + Sbjct: 180 LCEASSEQSYLKECVMRQAAEVFVLVTADKLGRASQQHWTPLERDWTLVTDDGALHEQLE 239 Query: 239 RLADAGARVIVAGV 252 A ARV V V Sbjct: 240 PF-HAQARVTVQAV 252 >ref|YP_839923.1| DeoR family transcriptional regulator [Burkholderia cenocepacia HI2424] gb|ABK13030.1| transcriptional regulator, DeoR family [Burkholderia cenocepacia HI2424] Length = 268 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 117/254 (46%), Positives = 156/254 (61%), Gaps = 4/254 (1%) Query: 1 MRSKERHARLLEALNAGEIDVDDLARRFDVSASTVRRDLQHLSKNNAVRRTYGGAI-LTA 59 M+ R +L+A+ G DV L F +S +TVRRDL+ L+ + + RTYGGA + Sbjct: 1 MKVTRRREAMLQAVLGGMTDVATLCEHFGMSEATVRRDLRALASDRRILRTYGGAAAVGG 60 Query: 60 HANETTLEQRLAVQGKQKQAIARAAIDLIEDGDTLILDAGSTVAAFGRLLQQRR-LRIIT 118 H E +LE+R +QK+AIA AA +EDGDT+ LD G+T AA RLL R + ++T Sbjct: 61 HEPEPSLEERRISSQEQKEAIAHAASSFVEDGDTVFLDGGTTTAALARLLAGRTDVHVVT 120 Query: 119 NNLALLPFLAKAPTLELVVLGGALRATSMSTMGPLANEALRRMTADRAVMSADGVVNGRG 178 NNL ++ L + + + V+GG +R++SMST+GPLA AL R++ D+A + ADGVV G Sbjct: 121 NNLLVVSPLVSS-GVHVTVIGGDVRSSSMSTLGPLAQIALSRLSVDKAFLGADGVVAELG 179 Query: 179 LCEADLEQVALKSLMMQHSKEVIVLADASKLGRAEQMAWAPLPPRWTLVTDVGASEEQCK 238 LCEA EQ LK +M+ + EV VL A KLGRA Q W PL WTLVTD GA EQ + Sbjct: 180 LCEASSEQSYLKECVMRQAAEVFVLVTADKLGRASQQHWTPLERDWTLVTDDGALHEQLE 239 Query: 239 RLADAGARVIVAGV 252 A ARV V V Sbjct: 240 PF-HAQARVTVQAV 252