BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0131.0014.p (315 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768943.1| immunogenic protein [Bradyrhizobium japonicum U... 463 e-128 ref|ZP_01622184.1| immunogenic protein precursor [Lyngbya sp. PC... 282 5e-74 ref|YP_001756023.1| TRAP transporter solute receptor TAXI family... 210 2e-52 ref|YP_002497563.1| TAXI family TRAP transporter solute receptor... 206 6e-51 ref|YP_004518410.1| TAXI family TRAP transporter solute receptor... 125 9e-27 >ref|NP_768943.1| immunogenic protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47568.1| immunogenic protein precursor [Bradyrhizobium japonicum USDA 110] Length = 320 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 233/302 (77%), Positives = 264/302 (87%), Gaps = 3/302 (0%) Query: 16 QEGSKTISRTTISFATATPGGGFPLYGNAFAEVMNAADPTLSIDPRNTKGSNENIPLLEA 75 Q G I TT+S TATPGGGFPLYGNAFAEVMNAADP ++I PRNTKGSNENIPLLE Sbjct: 20 QTGGTAIPTTTLSLGTATPGGGFPLYGNAFAEVMNAADPQITIAPRNTKGSNENIPLLEK 79 Query: 76 GNVDIATVAGEPSYEAFMGIGRPKATQLKILTAMYSSPGMFVVRADSPYKTIQDLVGQPV 135 G +D+A VAGEP+YEAF GIGR K +LKILTA+YS+PGMFVVRADSPYKTI+DLVGQPV Sbjct: 80 GELDLALVAGEPAYEAFAGIGRAK-VRLKILTAIYSNPGMFVVRADSPYKTIRDLVGQPV 138 Query: 136 AFGAKGSGLPILSRYILDGIGLKQDEDFKSIYLDRAGDGPAMVEDGRAAALWGAGIGWPG 195 AFGAKGSGLPIL+RY+LDG+GL+QDEDFK++YLDRAGDGPAMVEDGR AALWGAGIGWPG Sbjct: 139 AFGAKGSGLPILARYVLDGLGLRQDEDFKAVYLDRAGDGPAMVEDGRVAALWGAGIGWPG 198 Query: 196 FTKMAESATGARFIAPTTEEIARIRAKHTFLKPLTIPAGSYPNQTAAISSVGSWSYILVR 255 F +A SA+GARFIAP+ EE+ RIRAKH+FLKP+ +PAGSYP Q I+S+GSWS++L R Sbjct: 199 FAAVASSASGARFIAPSEEEVTRIRAKHSFLKPMIVPAGSYPKQAEPIASLGSWSFVLTR 258 Query: 256 ETLPDDVAYRLAKTLHGIEATFCNQLAQACX--AANTVAAAPDINLIHPGVLRYFREIGV 313 E LPDDVAYRLAKTLHG+EATFC +LAQAC AANTVAAAP LIHPGV++YFREIGV Sbjct: 259 EDLPDDVAYRLAKTLHGVEATFCKKLAQACETTAANTVAAAPKPELIHPGVMKYFREIGV 318 Query: 314 AK 315 K Sbjct: 319 VK 320 >ref|ZP_01622184.1| immunogenic protein precursor [Lyngbya sp. PCC 8106] gb|EAW35823.1| immunogenic protein precursor [Lyngbya sp. PCC 8106] Length = 329 Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 146/290 (50%), Positives = 186/290 (64%), Gaps = 4/290 (1%) Query: 23 SRTTISFATATPGGGFPLYGNAFAEVMNAADPTLSIDPRNTKGSNENIPLLEAGNVDIAT 82 S T + TAT GGGF L+G AEV+NAAD +L + T+GS ENI LLE G +DI Sbjct: 33 SPTQVILGTATQGGGFQLFGQNLAEVVNAADSSLEVKALATRGSTENISLLETGKIDIGL 92 Query: 83 VAGEPSYEAFMGIGRPKATQLKILTAMYSSPGMFVVRADSPYKTIQDLVGQPVAFGAKGS 142 V G +++ P T+LK+L MY +PGMFVVRADSP + I DL G+PVAFG + S Sbjct: 93 VEGNAAHQVLAN-PEPSPTRLKVLFVMYPNPGMFVVRADSPDRRIADLTGKPVAFGTRNS 151 Query: 143 GLPILSRYILDGIGLKQDEDFKSIYLDRAGDGPAMVEDGRAAALWGAGIGWPGFTKMAES 202 GL IL+ +LDGIG ++DF I L++A DGP +V G AALWGAGIGWPGF K+A Sbjct: 152 GLRILATNLLDGIGFNPEQDFTPIILEKAADGPRLVLSGEVAALWGAGIGWPGFVKVANG 211 Query: 203 ATGARFIAPTTEEIARIRAKHTFLKPLTIPAGSYPNQTAAISSVGSWSYILVRETLPDDV 262 GARFIAP++ EI +I +K+ LK +++PA +Y Q AI+SVG WS IL R LPD + Sbjct: 212 PKGARFIAPSSTEIQQILSKYPHLKTMSVPANTYKGQDQAINSVGLWSLILARPDLPDSI 271 Query: 263 AYRLAKTLHGIEATFCNQLAQA--CXAANTVAAAPDINLIHPGVLRYFRE 310 AYRL +H +A +LAQ NT+ NL HPG LRYF+E Sbjct: 272 AYRLVGAIHQGQAALVQRLAQGQYTTLENTMENVYPENL-HPGALRYFKE 320 >ref|YP_001756023.1| TRAP transporter solute receptor TAXI family protein [Methylobacterium radiotolerans JCM 2831] gb|ACB25340.1| TRAP transporter solute receptor, TAXI family [Methylobacterium radiotolerans JCM 2831] Length = 332 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 121/287 (42%), Positives = 162/287 (56%), Gaps = 13/287 (4%) Query: 27 ISFATATPGGGFPLYGNAFAEVMNAADPTLSIDPRNTKGSNENIPLLEAGNVDIATVAGE 86 + ATATPGGGFP +G FA + AADP L+++ R T GS+EN+ LL AG VD+ V GE Sbjct: 56 LVLATATPGGGFPAFGETFAGAIAAADPALTVERRATGGSSENVGLLRAGRVDLGLVQGE 115 Query: 87 PSYEAFMGIGRPKATQLKILTAMYSSPGMFVVRADSPYKTIQDLVGQPVAFGAKGSGLPI 146 +Y A + L +L MY +PG+FVV A S +++ DL G+ V G SGL + Sbjct: 116 YAYPALA-----EGGGLTVLAPMYPTPGLFVVPAGSAIRSVADLRGRRVVLGTHKSGLTV 170 Query: 147 LSRYILDGIGLKQDEDFKSIYLDRAGDGPAMVEDGRAAALWGAGIGWPGFTKMAESATGA 206 + R L GL + D I LDRAGDGP +V +GRA ALWG G+ WPGF +A GA Sbjct: 171 MGRSALGASGLDPERDISPILLDRAGDGPTLVREGRADALWGGGLDWPGFRALASDPGGA 230 Query: 207 RFIAPTTEEIARIRAKHTFLKPLTIPAGSYPNQTAAISSVGSWSYILVRETLPDDVAYRL 266 RF P+ IAR+ + LT+PAGS+ Q I +VGSWS++L R L ++ AYR+ Sbjct: 231 RFFGPSEAGIARLAQPGAATRRLTVPAGSFAGQAEPIETVGSWSFVLARPGLDEETAYRV 290 Query: 267 AKTLHGIEATFCNQLAQACXAANTVAAAPDINLIHPGVLRYFREIGV 313 L + T N V P + ++PG R+ RE GV Sbjct: 291 VSALARTDLTTARP-------RNLVGLVP-ADRVNPGTARFLREAGV 329 >ref|YP_002497563.1| TAXI family TRAP transporter solute receptor [Methylobacterium nodulans ORS 2060] gb|ACL57260.1| TRAP transporter solute receptor, TAXI family [Methylobacterium nodulans ORS 2060] Length = 320 Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 126/300 (42%), Positives = 179/300 (59%), Gaps = 11/300 (3%) Query: 15 AQEGSKTISRTTISFATATPGGGFPLYGNAFAEVMNAADPTLSIDPRNTKGSNENIPLLE 74 AQE ++ + TATPGGGF YG A A + A PT+ ++ R T GS EN+ LL Sbjct: 26 AQEPARLV------LGTATPGGGFRAYGEALAAAVREASPTVELELRATGGSAENLALLR 79 Query: 75 AGNVDIATVAGEPSYEAFMG-IGRPKATQLKILTAMYSSPGMFVVRADSPYKTIQDLVGQ 133 G +D+A V GE +Y+A RPK L ++ +Y++PG+FVV A SP ++++DL G+ Sbjct: 80 DGKLDLALVQGEFAYKALAAEEDRPK---LTVVAPIYATPGLFVVPASSPIRSVEDLRGR 136 Query: 134 PVAFGAKGSGLPILSRYILDGIGLKQDEDFKSIYLDRAGDGPAMVEDGRAAALWGAGIGW 193 VA G + SGL +++R +L G G+ D D + I LDRAGDGP MV DGRAAALWG G+GW Sbjct: 137 EVALGTRNSGLTMMARAVLRGSGIDPDHDIQPILLDRAGDGPGMVLDGRAAALWGGGLGW 196 Query: 194 PGFTKMAESATGARFIAPTTEEIARIRAKHTFLKPLTIPAGSYPNQTAAISSVGSWSYIL 253 PGF +AE+ GARF P + I RI A L+ +T+PA S+P QT AI +VGSWS+I+ Sbjct: 197 PGFRTLAETPGGARFFGPAPQAIDRILALSPSLRRMTVPASSFPLQTEAIETVGSWSFII 256 Query: 254 VRETLPDDVAYRLAKTLHGIEATFCNQLAQACXA-ANTVAAAPDINLIHPGVLRYFREIG 312 + L RL + + ++ +L Q + +A +HP + + RE+G Sbjct: 257 AKPGLDPAAVSRLVRAIDLGQSALARRLPQGRASDPRDLAGVVPATWLHPATVAFLREVG 316 >ref|YP_004518410.1| TAXI family TRAP transporter solute receptor [Desulfotomaculum kuznetsovii DSM 6115] gb|AEG16609.1| TRAP transporter solute receptor, TAXI family [Desulfotomaculum kuznetsovii DSM 6115] Length = 332 Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 11/292 (3%) Query: 27 ISFATATPGGGFPLYGNAFAEVMNAADPTLSIDPRNTKGSNENIPLLEAGNVDIATVAGE 86 ++FATA GG F G A++++ P+L + T GS EN LL+ G D+A +AG+ Sbjct: 44 LTFATAGTGGTFYPLGGGMAKIISKYVPSLQVTAEATGGSVENARLLDRGEADLAFMAGD 103 Query: 87 PSYEAFMGIGRPKATQLKI--LTAMYSSPGMFVVRADSPYKTIQDLVGQPVAFGAKGSGL 144 +YEA+ G+G + + K L YS P V D +I DL G+ VA G+ GSG Sbjct: 104 VAYEAYHGLGDFQNEKKKFFALFKTYSEPLHIVTLQDKKINSIMDLKGKKVAVGSPGSGT 163 Query: 145 PILSRYILDGIGLKQDEDFKSIYLDRAGDGPAMVEDGRAAALWGAGIGWPGFTKMAESAT 204 + +R +L+ +G+ + D YL A A+ ++ AA+ +G P M SA Sbjct: 164 EVKARALLNALGITYN-DIDEQYLSFAEASDALKDNNIDAAIM--AVGAPASAVMDLSAV 220 Query: 205 -GARFIAPTTEEIARIRAKHTFLKPLTIPAGSYPNQTAAISSVGSWSYILVRETLPDDVA 263 + I+ T EEI++++ KH + I G Y + +V + R LP+ A Sbjct: 221 REVKLISLTPEEISKVKEKHPYFFESKIEKGVYEKIPVEVETVAVPIVVAARADLPEQTA 280 Query: 264 YRLAKTL--HGIEATFCNQLAQACXAANTVAAAPDINLIHPGVLRYFREIGV 313 Y + K + H E +++A+ V P + +HPG RYF+E G+ Sbjct: 281 YEVVKAIFEHLPELQTVHRVAKEITLETAV---PAVVPLHPGAERYFKEKGL 329