BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0131.0010.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768947.1| hypothetical protein blr2307 [Bradyrhizobium ja... 214 7e-54 ref|YP_578331.1| molybdopterin binding domain-containing protein... 196 2e-48 ref|ZP_08628837.1| molybdopterin biosynthesis protein [Bradyrhiz... 165 4e-39 ref|YP_002289693.1| molybdopterin binding domain [Oligotropha ca... 144 7e-33 ref|YP_674983.1| molybdopterin binding domain-containing protein... 141 6e-32 >ref|NP_768947.1| hypothetical protein blr2307 [Bradyrhizobium japonicum USDA 110] dbj|BAC47572.1| blr2307 [Bradyrhizobium japonicum USDA 110] Length = 368 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 115/179 (64%), Positives = 133/179 (74%) Query: 5 QRLPPSLTPLDAALAAVLRDVGPVQPIALQPADALRCIAAEMPALRAYPPHDVAVSDGWA 64 QRLPPSLTPLD ALAA+LRDV P+ P+AL +A+ CIAA+ P L AYPPHD+A DGWA Sbjct: 3 QRLPPSLTPLDTALAALLRDVEPITPVALPLTEAIGCIAADAPLLAAYPPHDIAGMDGWA 62 Query: 65 MRANDLVGASSYAPLPLAEPPVWVAAGAAMPEGSDCVVDADAVDTSGPLPQVLAEAIPGQ 124 +RANDLVGAS+Y+P PLA P WV AG AMP G DCV+DADAV+ SGPL QVLAE +PGQ Sbjct: 63 LRANDLVGASAYSPSPLATAPAWVDAGDAMPAGCDCVLDADAVEMSGPLAQVLAEGVPGQ 122 Query: 125 GVRRAGSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRVRRPRLCIVNVANGELTAQL 183 GVRRAGSDIAV G P+ P L+LA A + L VRRPRL IVNV + TA + Sbjct: 123 GVRRAGSDIAVRTLAGTEGYPVGPAALMLAGVAAVDRLSVRRPRLRIVNVPDTTTTAHM 181 >ref|YP_578331.1| molybdopterin binding domain-containing protein [Nitrobacter hamburgensis X14] gb|ABE63871.1| molybdopterin binding domain [Nitrobacter hamburgensis X14] Length = 369 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 105/183 (57%), Positives = 133/183 (72%), Gaps = 1/183 (0%) Query: 1 MVTAQRLPPSLTPLDAALAAVLRDVGPVQPIALQPADALRCIAAEMPALRAYPPHDVAVS 60 M+T Q LP SLTPL+ A+A +L ++ V P L A+AL C+ AE+PAL + P D+A + Sbjct: 1 MIT-QCLPASLTPLETAVATLLYEIEAVTPEELPLAEALGCVVAEIPALPSVPARDLAAA 59 Query: 61 DGWAMRANDLVGASSYAPLPLAEPPVWVAAGAAMPEGSDCVVDADAVDTSGPLPQVLAEA 120 DGWA+ AND+VGASSY+PL + PP WV AG AMP+ DCV+D DAVDTSGP+ +V+ E Sbjct: 60 DGWAVNANDVVGASSYSPLAVVRPPTWVDAGDAMPQHCDCVLDIDAVDTSGPVAEVIVEG 119 Query: 121 IPGQGVRRAGSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRVRRPRLCIVNVANGELT 180 +PGQG+RRAGSD+A R IA+G + PR LL ARAAGL+ L VRRPRL IVN+ G T Sbjct: 120 VPGQGIRRAGSDVAADRPAIASGHLIRPRDLLTARAAGLETLNVRRPRLRIVNLPGGTAT 179 Query: 181 AQL 183 A L Sbjct: 180 AHL 182 >ref|ZP_08628837.1| molybdopterin biosynthesis protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08196.1| molybdopterin biosynthesis protein [Bradyrhizobiaceae bacterium SG-6C] Length = 373 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 101/208 (48%), Positives = 134/208 (64%), Gaps = 3/208 (1%) Query: 5 QRLPPSLTPLDAALAAVLRDVGPVQPIALQPADALRCIAA-EMPALRAYPPHDVAVSDGW 63 QRLP +LTPLDAAL +L + PV+P+ AD+L +AA P A+P VAVSDGW Sbjct: 3 QRLPAALTPLDAALRLLLDGIRPVEPMDGSLADSLGHLAAVNAPQREAHPAFSVAVSDGW 62 Query: 64 AMRANDLVGASSYAPLPLAEPPVWVAAGAAMPEGSDCVVDADAVDTSGPLPQVLAEAIPG 123 A+RA+D+ GASSY+P+ L PVWV AG +PE DCV+DAD + GP+ QVLAEA+PG Sbjct: 63 ALRASDIAGASSYSPVALTSVPVWVEAGDRLPERCDCVLDADMTEQIGPIFQVLAEAVPG 122 Query: 124 QGVRRAGSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRVRRPRLCIVNVA--NGELTA 181 QGVRRAG DIA GR+++ G + P L+AR AG+ L+VR PR+C+++VA +G + Sbjct: 123 QGVRRAGDDIAAGRSIVVQGTRIRPLDQLVARVAGINRLQVRSPRVCVIDVAATDGSTAS 182 Query: 182 QLXLRSSSSSRHPMWRRLQTHSIPTAAI 209 + + S LQT AAI Sbjct: 183 SQFVLEFAESAGARTVGLQTKGRDAAAI 210 >ref|YP_002289693.1| molybdopterin binding domain [Oligotropha carboxidovorans OM5] ref|YP_004632310.1| molybdopterin biosynthesis protein [Oligotropha carboxidovorans OM5] gb|ACI93828.1| molybdopterin binding domain [Oligotropha carboxidovorans OM5] gb|AEI02493.1| putative molybdopterin biosynthesis protein [Oligotropha carboxidovorans OM4] gb|AEI06069.1| putative molybdopterin biosynthesis protein [Oligotropha carboxidovorans OM5] Length = 368 Score = 144 bits (364), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 83/167 (49%), Positives = 107/167 (64%), Gaps = 1/167 (0%) Query: 11 LTPLDAALAAVLRDVGPVQPIALQPADALRCIAAEM-PALRAYPPHDVAVSDGWAMRAND 69 L LD ALA +L + VQ I++ +A+ IAA M P P D A+ DGWA+ + D Sbjct: 4 LVSLDDALAGLLEGLAAVQEISVPVVEAVGSIAAAMAPLGVGVPQQDTAMRDGWALSSRD 63 Query: 70 LVGASSYAPLPLAEPPVWVAAGAAMPEGSDCVVDADAVDTSGPLPQVLAEAIPGQGVRRA 129 LVGA+SYAP L PP+W+ AG MPEG DC+VD D V+ +GPL QV EA PG GVRRA Sbjct: 64 LVGATSYAPAFLPNPPLWIEAGQPMPEGCDCIVDPDLVEVNGPLAQVTGEASPGAGVRRA 123 Query: 130 GSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRVRRPRLCIVNVAN 176 G DIA G ++IA G + P LA AAGL + +R+PR+ IV+V + Sbjct: 124 GGDIAQGASIIAPGSVVRPLDAALACAAGLSGIAIRKPRVTIVDVVS 170 >ref|YP_674983.1| molybdopterin binding domain-containing protein [Mesorhizobium sp. BNC1] gb|ABG63818.1| molybdopterin binding domain [Chelativorans sp. BNC1] Length = 375 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 81/173 (46%), Positives = 105/173 (60%), Gaps = 7/173 (4%) Query: 25 VGPVQPIALQPADALRCIAAEMPALRAYPPHDVAVSDGWAMRANDLVGASSYAPLPLAEP 84 V PV P + AL +AAEMP + A P ++A DGWA RA DLVGASSY+PL L Sbjct: 25 VRPVAPCFVPLEQALGRVAAEMPGIAAQPQRNIAAIDGWACRALDLVGASSYSPLALPTV 84 Query: 85 PVWVAAGAAMPEGSDCVVDADAVDTSGPLPQVLAEAIPGQGVRRAGSDIAVGRTVIAAGE 144 P+WV G MPE DCV++AD VD SGP+ Q + EA PGQG+RRAG D+A GR AG Sbjct: 85 PIWVETGEVMPEDCDCVLEADLVDCSGPMAQAVGEAAPGQGMRRAGEDLAAGRPPAVAGN 144 Query: 145 PLLPRGLLLARAAGLQMLRVRRPRLCIVNVA-------NGELTAQLXLRSSSS 190 + LL+AR GL L VR PR ++NVA +G+ A+ + + ++ Sbjct: 145 MICSIDLLVARRLGLDKLAVRTPRAHMINVAAVSQETFSGQFVAEYLMEAGAT 197