BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0131.0003.p         (112 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003191987.1| two-component sensor molecule [Cryptococcus ...    36   1.9  

>ref|XP_003191987.1| two-component sensor molecule [Cryptococcus gattii WM276]
 gb|ADV20200.1| Two-component sensor molecule, putative [Cryptococcus gattii WM276]
          Length = 1208

 Score = 36.2 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%)

Query: 28  AAAGTLFWLYTFYAIAHVPPGDGTGFQWLAVFPLGMVFGLFFLPAWLLVAIGRLPRFTAA 87
           A A +LF++  +     + P   + F W+A F +G +F L  LP  +L    R PR    
Sbjct: 274 ALASSLFFIINYALTVGLLPTPFSNFNWIAYFGIGGIFTLPVLPLIVLDWPRRHPRIWQP 333

Query: 88  LGVCGLIAFA 97
           +  C    FA
Sbjct: 334 IIFCACWVFA 343