BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0130.0008.p (539 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769660.1| GMC type oxidoreductase [Bradyrhizobium japonic... 989 0.0 ref|YP_001239011.1| GMC-type oxidoreductase [Bradyrhizobium sp. ... 946 0.0 ref|YP_001204696.1| GMC-type oxidoreductase [Bradyrhizobium sp. ... 935 0.0 ref|ZP_08629209.1| glucose-methanol-choline oxidoreductase [Brad... 917 0.0 ref|YP_485352.1| glucose-methanol-choline oxidoreductase [Rhodop... 894 0.0 >ref|NP_769660.1| GMC type oxidoreductase [Bradyrhizobium japonicum USDA 110] dbj|BAC48285.1| GMC type oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 539 Score = 989 bits (2558), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/539 (87%), Positives = 504/539 (93%) Query: 1 MPRRLEGDFDYIIVGAGTAGCIMANRLSADPKTRVLLLEAGGKDNWIWFHIPVGYLFAIG 60 MPRRLEG+FDYI+VGAGTAGCI+ANRLSADPK RVL+LEAGG DNWIWFHIPVGYLFAIG Sbjct: 1 MPRRLEGEFDYIVVGAGTAGCILANRLSADPKNRVLILEAGGDDNWIWFHIPVGYLFAIG 60 Query: 61 NPRSDWMFKTEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGWS 120 NPRSDWMFKTEAEPGLNGR+LAYPRGKVIGG SAINAMISMRGQAADYDHWRQLG+TGW Sbjct: 61 NPRSDWMFKTEAEPGLNGRALAYPRGKVIGGCSAINAMISMRGQAADYDHWRQLGMTGWG 120 Query: 121 YSDVLPAFRRLEDHFLGESEHHGVGGGWRIEAPRLSWQILDAVGDAAEEMGIKRIPDFNT 180 Y DVLP F+R+EDHFLG SEHHGVGGGWRIEAPRLSW++LDAVGDAAEEMGIKRIPDFNT Sbjct: 121 YDDVLPLFKRIEDHFLGASEHHGVGGGWRIEAPRLSWEVLDAVGDAAEEMGIKRIPDFNT 180 Query: 181 GDNEGTSYFHVNQKRGRRWSSARGFLKPVLNRGNLRLETDVLVDRLIIESGRAAGVLFRQ 240 GDNEGTSYFHVNQKRGRRWSSARGFLKP LNR NLRLE VLVDRLIIE GRA GV F Q Sbjct: 181 GDNEGTSYFHVNQKRGRRWSSARGFLKPALNRPNLRLEKHVLVDRLIIEQGRAVGVRFVQ 240 Query: 241 GDELVEARASGEVILCAGSIGTTQVLQRSGIGPSEWLSPLGIDIVLDVQGIGHNLQDHLQ 300 E++EARA EVIL AG+IG+ QVL RSGIGP++WLSPLGID+++D GIG NLQDHLQ Sbjct: 241 NGEIIEARAKREVILSAGAIGSVQVLHRSGIGPADWLSPLGIDVMMDKPGIGRNLQDHLQ 300 Query: 301 QRAIYKVSGVRTLNETYYNLVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDSTRSRANI 360 QRAIYKV GVRTLNETYYNL RRGLMGLDYAFRRRGPLTMAPSQLGIFTRSD+TR+RANI Sbjct: 301 QRAIYKVEGVRTLNETYYNLFRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDATRARANI 360 Query: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLQPSSRGTVRIKSSVPDDKPLIAPNYLSTDDD 420 QFHVQPLSLDKFGDPLHRFPAITVSACNLQP+SRGTVR++S+ PD+KP+IAPNYLSTDDD Sbjct: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLQPTSRGTVRLRSASPDEKPIIAPNYLSTDDD 420 Query: 421 RQVAADAIRTTRRLMKQRALEKYHPEEFLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAK 480 RQV ADAIRTTRRLM+Q+AL KYHP E+LPGPSVGDDDASLAKAAGDIGTTIFHPVGTAK Sbjct: 421 RQVGADAIRTTRRLMQQKALAKYHPSEYLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAK 480 Query: 481 MGTANDPMAVVDERLRFYGLNGLRIADASVMPTITSGNTNTPTAMIAEKAAAMILQDAR 539 MG ANDPMAVVDERLRFYGL+GLRI DAS+MPTITSGNTNTPTAMIAEK A MIL+DA+ Sbjct: 481 MGAANDPMAVVDERLRFYGLSGLRIVDASIMPTITSGNTNTPTAMIAEKGATMILEDAK 539 >ref|YP_001239011.1| GMC-type oxidoreductase [Bradyrhizobium sp. BTAi1] gb|ABQ35105.1| GMC-type oxidoreductase [Bradyrhizobium sp. BTAi1] Length = 539 Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/539 (86%), Positives = 504/539 (93%) Query: 1 MPRRLEGDFDYIIVGAGTAGCIMANRLSADPKTRVLLLEAGGKDNWIWFHIPVGYLFAIG 60 MPR+LEGD+DYI+VGAGTAGCI+ANRLSADP RVL+LEAGGKDNWIWFHIPVGYLFAIG Sbjct: 1 MPRQLEGDYDYIVVGAGTAGCILANRLSADPTKRVLILEAGGKDNWIWFHIPVGYLFAIG 60 Query: 61 NPRSDWMFKTEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGWS 120 NPRSDWMF+TEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGL GWS Sbjct: 61 NPRSDWMFRTEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLAGWS 120 Query: 121 YSDVLPAFRRLEDHFLGESEHHGVGGGWRIEAPRLSWQILDAVGDAAEEMGIKRIPDFNT 180 YSDVLP FRRLEDHFLGESEHHGVGGGWRIEAPRLSW +LDAVGDAAE+MGI+RIPDFNT Sbjct: 121 YSDVLPVFRRLEDHFLGESEHHGVGGGWRIEAPRLSWAVLDAVGDAAEQMGIRRIPDFNT 180 Query: 181 GDNEGTSYFHVNQKRGRRWSSARGFLKPVLNRGNLRLETDVLVDRLIIESGRAAGVLFRQ 240 GDNEG SYFHVNQKRGRRWSSARGFLKP L+R NLRLET+VLVDRLI+E+GRAAGV F+Q Sbjct: 181 GDNEGISYFHVNQKRGRRWSSARGFLKPALHRQNLRLETNVLVDRLIVENGRAAGVRFQQ 240 Query: 241 GDELVEARASGEVILCAGSIGTTQVLQRSGIGPSEWLSPLGIDIVLDVQGIGHNLQDHLQ 300 E +EARA GEVIL AGSIG+ QVLQRSGIGP++WLS LGID V D G+G NLQDHLQ Sbjct: 241 NGETIEARAKGEVILSAGSIGSVQVLQRSGIGPADWLSGLGIDTVFDKPGVGRNLQDHLQ 300 Query: 301 QRAIYKVSGVRTLNETYYNLVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDSTRSRANI 360 QRAIYKV+GV+TLNETYY+LVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSD+TR RANI Sbjct: 301 QRAIYKVTGVKTLNETYYSLVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDATRDRANI 360 Query: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLQPSSRGTVRIKSSVPDDKPLIAPNYLSTDDD 420 QFHVQPLSLDKFGDPLHRFPAITVSACNL+P+SRGTVRI+S+ D+ P IAPNYL+T+DD Sbjct: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLRPTSRGTVRIRSAKLDEAPSIAPNYLATEDD 420 Query: 421 RQVAADAIRTTRRLMKQRALEKYHPEEFLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAK 480 RQVAADAIR TRRLMKQ AL Y PEE+LPGP+VGDDDA+LAKAAGDIGTTIFHPVGTAK Sbjct: 421 RQVAADAIRVTRRLMKQSALAAYRPEEYLPGPAVGDDDAALAKAAGDIGTTIFHPVGTAK 480 Query: 481 MGTANDPMAVVDERLRFYGLNGLRIADASVMPTITSGNTNTPTAMIAEKAAAMILQDAR 539 MG A+DPMAVVDERLRF+G+ LRIADAS+MPTITSGNTNTPTAMIAEKAAAMIL+D R Sbjct: 481 MGIADDPMAVVDERLRFHGIARLRIADASIMPTITSGNTNTPTAMIAEKAAAMILEDTR 539 >ref|YP_001204696.1| GMC-type oxidoreductase [Bradyrhizobium sp. ORS 278] emb|CAL76459.1| GMC-type oxidoreductase [Bradyrhizobium sp. ORS 278] Length = 539 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/539 (85%), Positives = 500/539 (92%) Query: 1 MPRRLEGDFDYIIVGAGTAGCIMANRLSADPKTRVLLLEAGGKDNWIWFHIPVGYLFAIG 60 MPR+LEG++DYI+VGAGTAGCI+ANRLSADPKTRVL+LEAGG DNWIWFHIPVGYLFAIG Sbjct: 1 MPRQLEGEYDYIVVGAGTAGCILANRLSADPKTRVLILEAGGYDNWIWFHIPVGYLFAIG 60 Query: 61 NPRSDWMFKTEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGWS 120 NPRSDWMF+TE+EPGLNGRSLAYPRGKVIGG SAINAMISMRGQAADYDHWRQLGL GWS Sbjct: 61 NPRSDWMFRTESEPGLNGRSLAYPRGKVIGGCSAINAMISMRGQAADYDHWRQLGLPGWS 120 Query: 121 YSDVLPAFRRLEDHFLGESEHHGVGGGWRIEAPRLSWQILDAVGDAAEEMGIKRIPDFNT 180 YSDVL FRRLEDHFLGESEHHGVGGGWRIEAPRLSW +LDAVGDAAE+MGI+RIPDFNT Sbjct: 121 YSDVLAVFRRLEDHFLGESEHHGVGGGWRIEAPRLSWAVLDAVGDAAEQMGIRRIPDFNT 180 Query: 181 GDNEGTSYFHVNQKRGRRWSSARGFLKPVLNRGNLRLETDVLVDRLIIESGRAAGVLFRQ 240 GDNEG SYFHVNQ+RGRRWSSARGFLKP L R NLRLET+VLVDRLI+E+GR GV F+Q Sbjct: 181 GDNEGISYFHVNQRRGRRWSSARGFLKPALKRQNLRLETNVLVDRLIVENGRVTGVRFQQ 240 Query: 241 GDELVEARASGEVILCAGSIGTTQVLQRSGIGPSEWLSPLGIDIVLDVQGIGHNLQDHLQ 300 + +EARA GEVIL AGSIG+ QVLQRSGIGP+EWL LGID+VLD G+G NLQDHLQ Sbjct: 241 DGQAIEARAKGEVILSAGSIGSVQVLQRSGIGPAEWLGELGIDVVLDKPGVGRNLQDHLQ 300 Query: 301 QRAIYKVSGVRTLNETYYNLVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDSTRSRANI 360 QRAIYKVSGV+TLNETYY+LV+RGLMGLDYAFRRRGPLTMAPSQLGIFTRSD R RANI Sbjct: 301 QRAIYKVSGVKTLNETYYSLVKRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDPRRDRANI 360 Query: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLQPSSRGTVRIKSSVPDDKPLIAPNYLSTDDD 420 QFHVQPLSLDKFGDPLHRFPAITVSACNL+P+SRGTVRI+S+ D+ P IAPNYL+T+DD Sbjct: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLRPTSRGTVRIRSAKIDEAPSIAPNYLATEDD 420 Query: 421 RQVAADAIRTTRRLMKQRALEKYHPEEFLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAK 480 R+VAADAIR TRRLMKQ AL Y PEE+LPGPSVGDDDA+LAKAAGDIGTTIFHPVGTAK Sbjct: 421 REVAADAIRITRRLMKQSALAAYRPEEYLPGPSVGDDDAALAKAAGDIGTTIFHPVGTAK 480 Query: 481 MGTANDPMAVVDERLRFYGLNGLRIADASVMPTITSGNTNTPTAMIAEKAAAMILQDAR 539 MGTA+DPMAVVDERLRF GL+GLRIADAS+MPTITSGNTNTPTAMIAEKAA MIL+D R Sbjct: 481 MGTADDPMAVVDERLRFRGLDGLRIADASIMPTITSGNTNTPTAMIAEKAAGMILEDGR 539 >ref|ZP_08629209.1| glucose-methanol-choline oxidoreductase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07702.1| glucose-methanol-choline oxidoreductase [Bradyrhizobiaceae bacterium SG-6C] Length = 539 Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust. Identities = 450/539 (83%), Positives = 488/539 (90%) Query: 1 MPRRLEGDFDYIIVGAGTAGCIMANRLSADPKTRVLLLEAGGKDNWIWFHIPVGYLFAIG 60 M +RLEGDFDYI+VGAGTAGCI+ANRLSAD + RVL+LEAGGKDNWIWFHIPVGYLFAIG Sbjct: 1 MAKRLEGDFDYIVVGAGTAGCIVANRLSADLRKRVLILEAGGKDNWIWFHIPVGYLFAIG 60 Query: 61 NPRSDWMFKTEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGWS 120 NPRSDWMFKTE E GLNGR+LAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGW Sbjct: 61 NPRSDWMFKTEPEAGLNGRALAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGWG 120 Query: 121 YSDVLPAFRRLEDHFLGESEHHGVGGGWRIEAPRLSWQILDAVGDAAEEMGIKRIPDFNT 180 + DVLPAFR+LEDHFLGESEHHGVGGGWRIEAPRLSW +LDAV +AA EMGI++ PDFNT Sbjct: 121 WDDVLPAFRKLEDHFLGESEHHGVGGGWRIEAPRLSWAVLDAVAEAASEMGIRKTPDFNT 180 Query: 181 GDNEGTSYFHVNQKRGRRWSSARGFLKPVLNRGNLRLETDVLVDRLIIESGRAAGVLFRQ 240 GDNEG YFHVNQKRGRRWSSARGFLKP L+R NLRLET+VLVD+LI+E+GRA GV F Q Sbjct: 181 GDNEGIGYFHVNQKRGRRWSSARGFLKPALSRPNLRLETNVLVDKLIVENGRAVGVRFSQ 240 Query: 241 GDELVEARASGEVILCAGSIGTTQVLQRSGIGPSEWLSPLGIDIVLDVQGIGHNLQDHLQ 300 G E +EARA EVILC+GSIG+ QVL RSGIGP EWLSPLGID VLD QG+G NLQDHLQ Sbjct: 241 GGETIEARARSEVILCSGSIGSVQVLHRSGIGPQEWLSPLGIDTVLDRQGVGRNLQDHLQ 300 Query: 301 QRAIYKVSGVRTLNETYYNLVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDSTRSRANI 360 QRAIYKV GVRTLNETYYNL RRG MG+DY RRRGPLTMAPSQLGIFTRSD + RANI Sbjct: 301 QRAIYKVEGVRTLNETYYNLFRRGWMGVDYLLRRRGPLTMAPSQLGIFTRSDPRQERANI 360 Query: 361 QFHVQPLSLDKFGDPLHRFPAITVSACNLQPSSRGTVRIKSSVPDDKPLIAPNYLSTDDD 420 QFHVQPLSLDKFG+PLHRFPAIT++ACNL+PSSRGT+RIKS PD P IAPNYLST DD Sbjct: 361 QFHVQPLSLDKFGEPLHRFPAITIAACNLRPSSRGTIRIKSGAPDQAPAIAPNYLSTPDD 420 Query: 421 RQVAADAIRTTRRLMKQRALEKYHPEEFLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAK 480 RQVAADAIR TRRLMKQ AL YHP E+LPGPSVGDDDA+LAKAAGDIGTTIFHPVGTAK Sbjct: 421 RQVAADAIRVTRRLMKQHALAAYHPSEYLPGPSVGDDDAALAKAAGDIGTTIFHPVGTAK 480 Query: 481 MGTANDPMAVVDERLRFYGLNGLRIADASVMPTITSGNTNTPTAMIAEKAAAMILQDAR 539 MG+A+DP+AVVDERLR +GL+GLR+ DASVMPTITSGNTNTPTAMIAEK AAMI++D R Sbjct: 481 MGSASDPLAVVDERLRLHGLSGLRVVDASVMPTITSGNTNTPTAMIAEKGAAMIVEDGR 539 >ref|YP_485352.1| glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris HaA2] gb|ABD06441.1| Glucose-methanol-choline oxidoreductase [Rhodopseudomonas palustris HaA2] Length = 549 Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/536 (80%), Positives = 477/536 (88%) Query: 4 RLEGDFDYIIVGAGTAGCIMANRLSADPKTRVLLLEAGGKDNWIWFHIPVGYLFAIGNPR 63 ++EG+FDYI+VGAGTAGCI+ANRLSADP RVLLLEAGG+DNWIWFHIPVGYLFAIGNPR Sbjct: 14 QIEGEFDYIVVGAGTAGCIVANRLSADPNCRVLLLEAGGRDNWIWFHIPVGYLFAIGNPR 73 Query: 64 SDWMFKTEAEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLTGWSYSD 123 SDWMF+TE EPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGL+GW + D Sbjct: 74 SDWMFRTEPEPGLNGRSLAYPRGKVIGGSSAINAMISMRGQAADYDHWRQLGLSGWGWDD 133 Query: 124 VLPAFRRLEDHFLGESEHHGVGGGWRIEAPRLSWQILDAVGDAAEEMGIKRIPDFNTGDN 183 V FRRLEDHFLG+SEHHG GGGWRIEA RLSW ILDAV DAA EMGI R DFNTGDN Sbjct: 134 VRQVFRRLEDHFLGDSEHHGKGGGWRIEAARLSWPILDAVADAAGEMGIPRSADFNTGDN 193 Query: 184 EGTSYFHVNQKRGRRWSSARGFLKPVLNRGNLRLETDVLVDRLIIESGRAAGVLFRQGDE 243 EG YFHVNQKRGRRWSSARGFLKP L+R NLRLET V+ DR+I+E+GRA GV F+QG Sbjct: 194 EGVGYFHVNQKRGRRWSSARGFLKPALHRPNLRLETGVVTDRVIVENGRAVGVRFQQGGG 253 Query: 244 LVEARASGEVILCAGSIGTTQVLQRSGIGPSEWLSPLGIDIVLDVQGIGHNLQDHLQQRA 303 +VEARA EV+LCAGSIG+ QVLQRSGIGP+EWL+PLGID VLD G+G NLQDHLQQRA Sbjct: 254 VVEARARREVVLCAGSIGSVQVLQRSGIGPAEWLTPLGIDPVLDRPGVGRNLQDHLQQRA 313 Query: 304 IYKVSGVRTLNETYYNLVRRGLMGLDYAFRRRGPLTMAPSQLGIFTRSDSTRSRANIQFH 363 IY+VSG RTLNE Y++L RR MG+DYA RRRGPLTMAPSQLGIFTRSD + RANIQFH Sbjct: 314 IYRVSGGRTLNEIYHSLPRRAWMGMDYALRRRGPLTMAPSQLGIFTRSDPHQERANIQFH 373 Query: 364 VQPLSLDKFGDPLHRFPAITVSACNLQPSSRGTVRIKSSVPDDKPLIAPNYLSTDDDRQV 423 VQPLSLDKFGDPLHRFPAITVSACNL+P+SRG +++KS+ D P IAP+YL+T DDR+V Sbjct: 374 VQPLSLDKFGDPLHRFPAITVSACNLRPTSRGEIKLKSTALDAAPSIAPHYLTTADDRRV 433 Query: 424 AADAIRTTRRLMKQRALEKYHPEEFLPGPSVGDDDASLAKAAGDIGTTIFHPVGTAKMGT 483 AADAIR TRRLM+Q+AL KY PEE+LPG +VGDDDASLAKAAGDIGTTIFHPVGTAKMG Sbjct: 434 AADAIRCTRRLMQQQALAKYQPEEYLPGRAVGDDDASLAKAAGDIGTTIFHPVGTAKMGL 493 Query: 484 ANDPMAVVDERLRFYGLNGLRIADASVMPTITSGNTNTPTAMIAEKAAAMILQDAR 539 A+DPMAVVDERLR +GL+GLR+ DASVMPTITSGNTNTPTAMIAEK A M+L+D + Sbjct: 494 ASDPMAVVDERLRLHGLDGLRVVDASVMPTITSGNTNTPTAMIAEKGATMMLEDGK 549