BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0130.0004.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08627340.1| transcriptional regulator, IclR family [Brady... 343 1e-92 ref|YP_533841.1| IclR family transcriptional regulator [Rhodopse... 333 1e-89 ref|YP_783026.1| IclR family transcriptional regulator [Rhodopse... 322 2e-86 ref|YP_001631814.1| IclR family transcriptional regulator [Borde... 207 8e-52 ref|YP_003982654.1| transcriptional regulator family protein 39 ... 195 6e-48 >ref|ZP_08627340.1| transcriptional regulator, IclR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09966.1| transcriptional regulator, IclR family [Bradyrhizobiaceae bacterium SG-6C] Length = 272 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 166/219 (75%), Positives = 192/219 (87%) Query: 34 AGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALENLRN 93 AGL RATARR+LATLVALKYC +DGRYFSLRPRALGLGLSYLNALPYWG+AQRALE+LRN Sbjct: 54 AGLTRATARRMLATLVALKYCEADGRYFSLRPRALGLGLSYLNALPYWGYAQRALEDLRN 113 Query: 94 EIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGTREA 153 +IGESCA+AVLDE EIVYALRLPARRILSANLG+GSRLPAHL+SLGRV+LAALPP R Sbjct: 114 DIGESCALAVLDETEIVYALRLPARRILSANLGIGSRLPAHLISLGRVLLAALPPDRRAD 173 Query: 154 YLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGAVVA 213 ++ F+Q+TPRTVT +L E LARVE GYAW+DGELDPAICGIAVP+RD AG VVA Sbjct: 174 IISQIDFKQITPRTVTSAAKLTEELARVEQQGYAWIDGELDPAICGIAVPVRDQAGNVVA 233 Query: 214 ALSVNTISGTVSEAGARKKYLLPLRRTAQEIRSQMLTSG 252 A+S+NTISGT+SE A+ K+L+ L+RTAQ+IR+Q +G Sbjct: 234 AVSINTISGTISEEEAKTKFLVTLKRTAQDIRTQTAANG 272 >ref|YP_533841.1| IclR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD89522.1| transcriptional regulator, IclR family [Rhodopseudomonas palustris BisB18] Length = 256 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 162/217 (74%), Positives = 188/217 (86%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A +AGLNRATARR+LATLVAL YC +GRYFSLRPRALGLGLSYLNALPYWG+AQ ALE+ Sbjct: 35 AVSAGLNRATARRMLATLVALNYCEVEGRYFSLRPRALGLGLSYLNALPYWGYAQSALED 94 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 LRNEIGESCA+AVLDEDEIVYALRLPARRILSANLG+GSRLPAH+VSLGRV+LA+LPP Sbjct: 95 LRNEIGESCALAVLDEDEIVYALRLPARRILSANLGIGSRLPAHVVSLGRVLLASLPPDK 154 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 +AYL R++TPRT+ DP L E L R GYAW+DGELDPAICGIAVP+RD GA Sbjct: 155 LQAYLTRAELRKLTPRTIVDPVALAEQLQRTREQGYAWIDGELDPAICGIAVPVRDHRGA 214 Query: 211 VVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIRSQ 247 VVAA+S+NTISG++ E GA++++L LRRTAQ+I+SQ Sbjct: 215 VVAAVSINTISGSIDEDGAKQRFLTALRRTAQDIQSQ 251 >ref|YP_783026.1| IclR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ08046.1| transcriptional regulator, IclR family [Rhodopseudomonas palustris BisA53] Length = 256 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 156/217 (71%), Positives = 184/217 (84%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A +GLNRATARR+LATLVAL YC +GRYFSLRPRALGLGLSYLNALPYWG+AQ ALE+ Sbjct: 35 AIASGLNRATARRMLATLVALNYCEVEGRYFSLRPRALGLGLSYLNALPYWGYAQSALED 94 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 LRNEIGESCA+AVLDE EIVYALRLPARRILSANLG+GSRLPAH+VSLGRV+LA+LPP Sbjct: 95 LRNEIGESCALAVLDETEIVYALRLPARRILSANLGIGSRLPAHVVSLGRVLLASLPPEK 154 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 +LA +++TPRTV +P++L L R GYAW+DGELDPAICGIAVP+RD GA Sbjct: 155 LNYFLANAALQKLTPRTVVEPDKLAAELQRTREQGYAWIDGELDPAICGIAVPVRDHRGA 214 Query: 211 VVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIRSQ 247 VVAA+S+NTISG++ E A++++L LRRTAQ I+SQ Sbjct: 215 VVAAVSINTISGSIDEETAKERFLTALRRTAQNIQSQ 251 >ref|YP_001631814.1| IclR family transcriptional regulator [Bordetella petrii DSM 12804] emb|CAP43546.1| transcriptional regulator, IclR family [Bordetella petrii] Length = 261 Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 107/219 (48%), Positives = 145/219 (66%) Query: 28 GGPADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRA 87 G A+ L R RR L TL+ L + +DG+Y+ L P+ L LGLSYL +LPYW AQ A Sbjct: 38 GDVAEAVDLPRTAVRRFLLTLIDLSFVKTDGKYYWLTPKVLRLGLSYLYSLPYWRQAQLA 97 Query: 88 LENLRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALP 147 LE L IG+SCA++VLDE++IVY RL RRIL + +GSRLPAH VS+GRV+L+ L Sbjct: 98 LEELCARIGQSCAVSVLDEEDIVYVQRLHTRRILPMSPSLGSRLPAHAVSMGRVLLSGLD 157 Query: 148 PGTREAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDP 207 +AYL T +++T TV D RL + +V GYAWVDGELD +I G+ VP+RD Sbjct: 158 DAALDAYLQTATLKKLTGATVVDRARLKAAVEQVREQGYAWVDGELDESIAGLGVPVRDK 217 Query: 208 AGAVVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIRS 246 GA+VAA++V+ +G EA A +++L LR TA ++R+ Sbjct: 218 DGAIVAAINVSLPAGAFDEATALRQFLPELRHTASQLRA 256 >ref|YP_003982654.1| transcriptional regulator family protein 39 [Achromobacter xylosoxidans A8] gb|ADP19939.1| bacterial transcriptional regulator family protein 39 [Achromobacter xylosoxidans A8] Length = 257 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 108/222 (48%), Positives = 147/222 (66%), Gaps = 4/222 (1%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A L R RR L TLV L + SDG+++ L P+ L LGLSYL LP+W H+Q ALE Sbjct: 36 ASAVELPRTAVRRFLMTLVELSFVKSDGKHYWLTPKVLRLGLSYLYTLPFWRHSQLALEE 95 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 L IG+SCA++VLDE+EIVY RL +RIL + +GSRLPAH VS+GRV+L+ L Sbjct: 96 LGARIGQSCAVSVLDEEEIVYVQRLHTKRILPMSPSLGSRLPAHAVSMGRVLLSGLEDEA 155 Query: 151 REAYLATGGFRQVTPRTVTDPERLGE--LLARVESDGYAWVDGELDPAICGIAVPLRDPA 208 + YL +++T TV D ++L E LLAR GYAWVD ELD +I G+AVP+RD Sbjct: 156 LQNYLQAAKLKKMTATTVVDKDKLREGILLAR--EQGYAWVDSELDDSIAGLAVPVRDQD 213 Query: 209 GAVVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIRSQMLT 250 G +VAA++V+ +G EA A ++L PLR+TA ++R+ M++ Sbjct: 214 GTIVAAVNVSLTAGAFEEAAAVAEFLPPLRQTASQLRATMVS 255