BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0077.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001927070.1| fumarate lyase [Methylobacterium populi BJ00... 459 e-127 ref|YP_003070378.1| aspartate ammonia-lyase [Methylobacterium ex... 451 e-125 ref|YP_002965253.1| Aspartate ammonia-lyase (Aspartase) [methylo... 451 e-125 ref|YP_001641400.1| fumarate lyase [Methylobacterium extorquens ... 450 e-124 ref|YP_002423030.1| fumarate lyase [Methylobacterium chlorometha... 447 e-124 >ref|YP_001927070.1| fumarate lyase [Methylobacterium populi BJ001] gb|ACB82535.1| fumarate lyase [Methylobacterium populi BJ001] Length = 560 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 230/287 (80%), Positives = 246/287 (85%), Gaps = 9/287 (3%) Query: 17 ASGESGG--PSHL----AVATVRTVPIEQAQSRTEHDLLGEDDVPANALWGIHTKRAVMN 70 ASG + G PS L AVATVR V +E A++R EHDLLGE +VPA+ALWGIHTKRAV N Sbjct: 59 ASGNTVGTEPSRLEEDLAVATVRKVAMEAAKTRPEHDLLGEGEVPADALWGIHTKRAVAN 118 Query: 71 FPITGVPVGHFPEFVRALALVKQAAARANKRLGYLAPEKADAIEAACTQIATEKVYAESF 130 FPITGVPVGH+PE VRALALVKQAAARAN RLGYL+ KA+ I+ ACT +AT+ VYAE+F Sbjct: 119 FPITGVPVGHYPELVRALALVKQAAARANHRLGYLSKAKAEVIDEACTLVATDSVYAEAF 178 Query: 131 VVDAIQGGAGTSTNMNANEVIANVALRLMGRKPGDYHALHPNDDVNMAQSTNDAYPTALR 190 VVDAIQGGAGTSTNMNANEVIANV LRLMGR PGDY ALHPNDDVNMAQSTNDAYPTALR Sbjct: 179 VVDAIQGGAGTSTNMNANEVIANVGLRLMGRAPGDYAALHPNDDVNMAQSTNDAYPTALR 238 Query: 191 LAVIFATQPLVRALDDLAYSLKGKAVEFADVLKMGRTQLQDAVPMTLGQEFDAFHVTVKE 250 LAVIFATQPLV+ALDDLAY+ K KAVEFADVLKMGRTQLQDAVPMTLGQEFD FH T+KE Sbjct: 239 LAVIFATQPLVKALDDLAYAFKSKAVEFADVLKMGRTQLQDAVPMTLGQEFDGFHATIKE 298 Query: 251 DVARLNEISALFREVNLGATAIGTGINADPRYAALAX---SRWCWPP 294 DVARL EI LFREVNLGATAIGTGINADPRYAALA SR P Sbjct: 299 DVARLTEIVGLFREVNLGATAIGTGINADPRYAALAVEELSRLSGQP 345 >ref|YP_003070378.1| aspartate ammonia-lyase [Methylobacterium extorquens DM4] emb|CAX26564.1| Aspartate ammonia-lyase (Aspartase) [Methylobacterium extorquens DM4] Length = 571 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/271 (81%), Positives = 236/271 (87%), Gaps = 3/271 (1%) Query: 27 LAVATVRTVPIEQAQSRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVR 86 LAVATVR V +E A++R+EHDLLG+ +VPA+ALWGIHTKRAV NFPITGV VGH+PE VR Sbjct: 86 LAVATVRKVAMEGAKTRSEHDLLGDGEVPADALWGIHTKRAVANFPITGVSVGHYPELVR 145 Query: 87 ALALVKQAAARANKRLGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMN 146 ALALVKQAAAR+N RLGYL KA IE ACT +AT+ YAESFVVDAIQGGAGTSTNMN Sbjct: 146 ALALVKQAAARSNHRLGYLPKGKAKIIEEACTLVATDPTYAESFVVDAIQGGAGTSTNMN 205 Query: 147 ANEVIANVALRLMGRKPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDD 206 ANEVIANV LRLMG+ PGDY ALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLV+ALDD Sbjct: 206 ANEVIANVGLRLMGKAPGDYAALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVKALDD 265 Query: 207 LAYSLKGKAVEFADVLKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVN 266 LAY+ K KAVEFADVLKMGRTQLQDAVPMTLGQEFD FH T+KEDVARL EI LFREVN Sbjct: 266 LAYAFKSKAVEFADVLKMGRTQLQDAVPMTLGQEFDGFHATIKEDVARLTEIVGLFREVN 325 Query: 267 LGATAIGTGINADPRYAALAX---SRWCWPP 294 LGATAIGTGINADPRYAALA SR P Sbjct: 326 LGATAIGTGINADPRYAALAVEELSRLSGQP 356 >ref|YP_002965253.1| Aspartate ammonia-lyase (Aspartase) [methylobacterium extorquens AM1] gb|ACS41976.1| Aspartate ammonia-lyase (Aspartase) [Methylobacterium extorquens AM1] Length = 573 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/271 (81%), Positives = 236/271 (87%), Gaps = 3/271 (1%) Query: 27 LAVATVRTVPIEQAQSRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVR 86 LAVATVR V +E A++R+EHDLLG+ +VPA+ALWGIHTKRAV NFPITGV VGH+PE VR Sbjct: 88 LAVATVRKVAMEGAKTRSEHDLLGDGEVPADALWGIHTKRAVANFPITGVSVGHYPELVR 147 Query: 87 ALALVKQAAARANKRLGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMN 146 ALALVKQAAAR+N RLGYL KA IE ACT +AT+ YAESFVVDAIQGGAGTSTNMN Sbjct: 148 ALALVKQAAARSNHRLGYLPKGKAKIIEEACTLVATDPTYAESFVVDAIQGGAGTSTNMN 207 Query: 147 ANEVIANVALRLMGRKPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDD 206 ANEVIANV LRLMG+ PGDY ALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLV+ALDD Sbjct: 208 ANEVIANVGLRLMGKAPGDYAALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVKALDD 267 Query: 207 LAYSLKGKAVEFADVLKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVN 266 LAY+ K KAVEFADVLKMGRTQLQDAVPMTLGQEFD FH T+KEDVARL EI LFREVN Sbjct: 268 LAYAFKSKAVEFADVLKMGRTQLQDAVPMTLGQEFDGFHATIKEDVARLTEIVGLFREVN 327 Query: 267 LGATAIGTGINADPRYAALAX---SRWCWPP 294 LGATAIGTGINADPRYAALA SR P Sbjct: 328 LGATAIGTGINADPRYAALAVEELSRLSGQP 358 >ref|YP_001641400.1| fumarate lyase [Methylobacterium extorquens PA1] gb|ABY32329.1| fumarate lyase [Methylobacterium extorquens PA1] Length = 571 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 220/271 (81%), Positives = 236/271 (87%), Gaps = 3/271 (1%) Query: 27 LAVATVRTVPIEQAQSRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVR 86 LAVATVR V +E A++R+EHDLLG+ +VPA+ALWGIHTKRAV NFPITGV VGH+PE VR Sbjct: 86 LAVATVRKVAMEGAKTRSEHDLLGDGEVPADALWGIHTKRAVANFPITGVSVGHYPELVR 145 Query: 87 ALALVKQAAARANKRLGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMN 146 ALALVKQAAAR+N RLGYL KA IE ACT +AT+ +Y ESFVVDAIQGGAGTSTNMN Sbjct: 146 ALALVKQAAARSNHRLGYLPKGKAKIIEEACTLVATDPIYGESFVVDAIQGGAGTSTNMN 205 Query: 147 ANEVIANVALRLMGRKPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDD 206 ANEVIANV LRLMGR PGDY ALHPNDDVNMAQSTNDAYPTA+RLAVIFATQPLV+ALDD Sbjct: 206 ANEVIANVGLRLMGRAPGDYAALHPNDDVNMAQSTNDAYPTAVRLAVIFATQPLVKALDD 265 Query: 207 LAYSLKGKAVEFADVLKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVN 266 LAY+ K KAVEFADVLKMGRTQLQDAVPMTLGQEFD FH T+KEDVARL EI LFREVN Sbjct: 266 LAYAFKSKAVEFADVLKMGRTQLQDAVPMTLGQEFDGFHATIKEDVARLTEIVGLFREVN 325 Query: 267 LGATAIGTGINADPRYAALAX---SRWCWPP 294 LGATAIGTGINADPRYAALA SR P Sbjct: 326 LGATAIGTGINADPRYAALAVEELSRLSGQP 356 >ref|YP_002423030.1| fumarate lyase [Methylobacterium chloromethanicum CM4] gb|ACK85102.1| fumarate lyase [Methylobacterium chloromethanicum CM4] Length = 568 Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust. Identities = 220/271 (81%), Positives = 235/271 (86%), Gaps = 3/271 (1%) Query: 27 LAVATVRTVPIEQAQSRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVR 86 LAVATVR V +E A++R+EHDLLG+ +VPA+ALWGIHTKRAV NFPITGV VGH+PE VR Sbjct: 83 LAVATVRKVAMEGAKTRSEHDLLGDGEVPADALWGIHTKRAVANFPITGVSVGHYPELVR 142 Query: 87 ALALVKQAAARANKRLGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMN 146 ALALVKQAAAR+N RLGYL KA IE AC +AT+ YAESFVVDAIQGGAGTSTNMN Sbjct: 143 ALALVKQAAARSNHRLGYLPKVKAKIIEEACILVATDPAYAESFVVDAIQGGAGTSTNMN 202 Query: 147 ANEVIANVALRLMGRKPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDD 206 ANEVIANV LRLMG+ PGDY ALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLV+ALDD Sbjct: 203 ANEVIANVGLRLMGKAPGDYAALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVKALDD 262 Query: 207 LAYSLKGKAVEFADVLKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVN 266 LAY+ K KAVEFADVLKMGRTQLQDAVPMTLGQEFD FH T+KEDVARL EI LFREVN Sbjct: 263 LAYAFKSKAVEFADVLKMGRTQLQDAVPMTLGQEFDGFHATIKEDVARLTEIVGLFREVN 322 Query: 267 LGATAIGTGINADPRYAALAX---SRWCWPP 294 LGATAIGTGINADPRYAALA SR P Sbjct: 323 LGATAIGTGINADPRYAALAVEELSRLSGQP 353