BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0129.0076.p         (213 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002965253.1| Aspartate ammonia-lyase (Aspartase) [methylo...   397   e-109
ref|YP_003070378.1| aspartate ammonia-lyase [Methylobacterium ex...   397   e-109
ref|YP_002423030.1| fumarate lyase [Methylobacterium chlorometha...   396   e-109
ref|YP_001641400.1| fumarate lyase [Methylobacterium extorquens ...   396   e-109
ref|YP_001927070.1| fumarate lyase [Methylobacterium populi BJ00...   390   e-107

>ref|YP_002965253.1| Aspartate ammonia-lyase (Aspartase) [methylobacterium extorquens
           AM1]
 gb|ACS41976.1| Aspartate ammonia-lyase (Aspartase) [Methylobacterium extorquens
           AM1]
          Length = 573

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 203/208 (97%)

Query: 1   VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGIGEIRLPAVQAGS 60
           VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTG GEIRLPAVQAGS
Sbjct: 360 VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGFGEIRLPAVQAGS 419

Query: 61  SIMPGKVNPVIPEVVNQVAFLVIGHDLTVTMCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 120
           SIMPGKVNPVIPEVVNQVA++VIGHDLTVT+CAEGGQLQLNAFEPTIGYCVLSSLRMLTA
Sbjct: 420 SIMPGKVNPVIPEVVNQVAYMVIGHDLTVTLCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 479

Query: 121 AVDTLTKRCVDGIEADRERCRSLVQGSIGLITALAPSLGYEASSRVARRALKENRSVADI 180
           A+DTLTKRC+DGIEADRERCRSLVQGSIGL+TALAP+LGYEASSR+ARRALKENR+VAD+
Sbjct: 480 AIDTLTKRCIDGIEADRERCRSLVQGSIGLVTALAPTLGYEASSRIARRALKENRAVADL 539

Query: 181 VLEEKLLTEAELNQLLELEAMTRPARRQ 208
           VLEE LLTEA+LN LLELEAMT P RRQ
Sbjct: 540 VLEEGLLTEAQLNGLLELEAMTHPTRRQ 567


>ref|YP_003070378.1| aspartate ammonia-lyase [Methylobacterium extorquens DM4]
 emb|CAX26564.1| Aspartate ammonia-lyase (Aspartase) [Methylobacterium extorquens
           DM4]
          Length = 571

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 203/208 (97%)

Query: 1   VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGIGEIRLPAVQAGS 60
           VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTG GEIRLPAVQAGS
Sbjct: 358 VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGFGEIRLPAVQAGS 417

Query: 61  SIMPGKVNPVIPEVVNQVAFLVIGHDLTVTMCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 120
           SIMPGKVNPVIPEVVNQVA++VIGHDLTVT+CAEGGQLQLNAFEPTIGYCVLSSLRMLTA
Sbjct: 418 SIMPGKVNPVIPEVVNQVAYMVIGHDLTVTLCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 477

Query: 121 AVDTLTKRCVDGIEADRERCRSLVQGSIGLITALAPSLGYEASSRVARRALKENRSVADI 180
           A+DTLTKRC+DGIEADRERCRSLVQGSIGL+TALAP+LGYEASSR+ARRALKENR+VAD+
Sbjct: 478 AIDTLTKRCIDGIEADRERCRSLVQGSIGLVTALAPTLGYEASSRIARRALKENRAVADL 537

Query: 181 VLEEKLLTEAELNQLLELEAMTRPARRQ 208
           VLEE LLTEA+LN LLELEAMT P RRQ
Sbjct: 538 VLEEGLLTEAQLNGLLELEAMTHPTRRQ 565


>ref|YP_002423030.1| fumarate lyase [Methylobacterium chloromethanicum CM4]
 gb|ACK85102.1| fumarate lyase [Methylobacterium chloromethanicum CM4]
          Length = 568

 Score =  396 bits (1018), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 203/208 (97%)

Query: 1   VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGIGEIRLPAVQAGS 60
           VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTG GEIRLPAVQAGS
Sbjct: 355 VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGFGEIRLPAVQAGS 414

Query: 61  SIMPGKVNPVIPEVVNQVAFLVIGHDLTVTMCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 120
           SIMPGKVNPVIPEVVNQVA++VIGHDLTVT+CAEGGQLQLNAFEPTIGYCVLSSLRMLTA
Sbjct: 415 SIMPGKVNPVIPEVVNQVAYMVIGHDLTVTLCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 474

Query: 121 AVDTLTKRCVDGIEADRERCRSLVQGSIGLITALAPSLGYEASSRVARRALKENRSVADI 180
           A+DTLTKRC+DGIEADRERCRSLVQGSIGL+TALAP+LGYEASSR+ARRALKENR+VAD+
Sbjct: 475 AIDTLTKRCIDGIEADRERCRSLVQGSIGLVTALAPTLGYEASSRIARRALKENRAVADL 534

Query: 181 VLEEKLLTEAELNQLLELEAMTRPARRQ 208
           VLEE LLTEA+LN LLELEAMT P RRQ
Sbjct: 535 VLEEGLLTEAQLNGLLELEAMTHPTRRQ 562


>ref|YP_001641400.1| fumarate lyase [Methylobacterium extorquens PA1]
 gb|ABY32329.1| fumarate lyase [Methylobacterium extorquens PA1]
          Length = 571

 Score =  396 bits (1018), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/208 (92%), Positives = 203/208 (97%)

Query: 1   VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGIGEIRLPAVQAGS 60
           VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTG GEIRLPAVQAGS
Sbjct: 358 VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGFGEIRLPAVQAGS 417

Query: 61  SIMPGKVNPVIPEVVNQVAFLVIGHDLTVTMCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 120
           SIMPGKVNPVIPEVVNQVA++VIGHDLTVT+CAEGGQLQLNAFEPTIGYCVLSSLRMLTA
Sbjct: 418 SIMPGKVNPVIPEVVNQVAYMVIGHDLTVTLCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 477

Query: 121 AVDTLTKRCVDGIEADRERCRSLVQGSIGLITALAPSLGYEASSRVARRALKENRSVADI 180
           A+DTLTKRC+DGIEADRERCRSLVQGSIGL+TALAP+LGYEASSR+ARRALKENR+VAD+
Sbjct: 478 AIDTLTKRCIDGIEADRERCRSLVQGSIGLVTALAPTLGYEASSRIARRALKENRAVADL 537

Query: 181 VLEEKLLTEAELNQLLELEAMTRPARRQ 208
           VLEE LLTEA+LN LLELEAMT P RRQ
Sbjct: 538 VLEEGLLTEAQLNGLLELEAMTHPTRRQ 565


>ref|YP_001927070.1| fumarate lyase [Methylobacterium populi BJ001]
 gb|ACB82535.1| fumarate lyase [Methylobacterium populi BJ001]
          Length = 560

 Score =  390 bits (1003), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/208 (90%), Positives = 202/208 (97%)

Query: 1   VLASNLIEATSDLGAFVLFSGVLKRVAVKLSKICNDLRLLSSGPRTGIGEIRLPAVQAGS 60
           VLASNLIEATSDLGAFVLFSG LKRVAVKLSKICNDLRLLSSGPRTG+GEIRLPAVQAGS
Sbjct: 347 VLASNLIEATSDLGAFVLFSGTLKRVAVKLSKICNDLRLLSSGPRTGLGEIRLPAVQAGS 406

Query: 61  SIMPGKVNPVIPEVVNQVAFLVIGHDLTVTMCAEGGQLQLNAFEPTIGYCVLSSLRMLTA 120
           SIMPGKVNPVIPEVVNQVA++VIGHDLTVT+CAEGGQLQLNAFEPTIGYCVLSSLRML+A
Sbjct: 407 SIMPGKVNPVIPEVVNQVAYMVIGHDLTVTLCAEGGQLQLNAFEPTIGYCVLSSLRMLSA 466

Query: 121 AVDTLTKRCVDGIEADRERCRSLVQGSIGLITALAPSLGYEASSRVARRALKENRSVADI 180
           A+DTLTKRCV+GIEADRERCRSLVQGSIGL+TALAP+LGYEASSR+ARRALKENR VA++
Sbjct: 467 AIDTLTKRCVEGIEADRERCRSLVQGSIGLVTALAPTLGYEASSRIARRALKENRPVAEL 526

Query: 181 VLEEKLLTEAELNQLLELEAMTRPARRQ 208
           VLEE LLTEA+LN LLELEAMT P RRQ
Sbjct: 527 VLEEGLLTEAQLNALLELEAMTHPTRRQ 554