BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0070.p (324 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766757.1| 2-dehydropantoate 2-reductase [Bradyrhizobium j... 510 e-142 ref|YP_004552886.1| 2-dehydropantoate 2-reductase [Sphingobium c... 341 1e-91 ref|YP_003559451.1| 2-dehydropantoate 2-reductase [Sphingobium j... 310 2e-82 ref|ZP_02188274.1| 2-dehydropantoate 2-reductase [alpha proteoba... 282 4e-74 ref|ZP_06898227.1| 2-dehydropantoate 2-reductase [Roseomonas cer... 215 9e-54 >ref|NP_766757.1| 2-dehydropantoate 2-reductase [Bradyrhizobium japonicum USDA 110] dbj|BAC45382.1| blr0117 [Bradyrhizobium japonicum USDA 110] Length = 324 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 242/322 (75%), Positives = 276/322 (85%) Query: 1 MRICIFGAGAVGSHFAVRLARAGHDVSCVMRGPHLDAVRTSGLTLKVGDTSVSAKVKASA 60 MRICIFGAGAVGSH AVRLARAGH+VSCVMRG HL+A R GL L+VGD+ V+AKV AS Sbjct: 1 MRICIFGAGAVGSHIAVRLARAGHEVSCVMRGAHLEAARAGGLKLRVGDSEVTAKVNASG 60 Query: 61 DPADLGPQDIVISTLKATGIGALATGLPPLLQRDTSIVFAQNGIPWWYDLGLPPQHPAIP 120 DPA LGPQD+VISTLKAT + L + + PLLQ DT+IVFAQNGIPWWY +GLPP+HP P Sbjct: 61 DPAQLGPQDVVISTLKATALTGLVSSIKPLLQDDTAIVFAQNGIPWWYGIGLPPRHPTPP 120 Query: 121 DLGFLDPGGHLRSVIQKERIIGGVIFSSNEVIAPGVVANLSPDRNRLMIGECDDRQGERI 180 D+ FLDPGG LR+ I KERIIGGVIFSSNEV++PGVV NL+PDRNRL+IGECDDR ERI Sbjct: 121 DISFLDPGGRLRACIPKERIIGGVIFSSNEVVSPGVVQNLTPDRNRLLIGECDDRNCERI 180 Query: 181 ATLRAALNDAAIESPEVKQIRETIWSKLLTNMSMSVLCLLTGLTARGVRDDPDMQDVIPR 240 LR LNDA +ESP V +IRE IWSKLLTNMS+SVLCLLTG TARGVRDDP +VIPR Sbjct: 181 TKLRGVLNDARLESPPVAEIREAIWSKLLTNMSLSVLCLLTGQTARGVRDDPAFAEVIPR 240 Query: 241 LLDEANVVATHYIPEVKRITRSGPAPDHKPSILQDYELGRAMEIDVLVRAPATFARAAAI 300 +L+EAN +A H+IPEVKR+TRSGPAP+HKPS+LQDYE+GRAMEIDVLV+APA FAR + + Sbjct: 241 MLNEANDIAQHFIPEVKRVTRSGPAPNHKPSLLQDYEIGRAMEIDVLVKAPAAFARTSGL 300 Query: 301 STPMLDLMAALAIQKARDKGLY 322 TP LDL+AALAIQKARDKGLY Sbjct: 301 PTPTLDLIAALAIQKARDKGLY 322 >ref|YP_004552886.1| 2-dehydropantoate 2-reductase [Sphingobium chlorophenolicum L-1] gb|AEG48380.1| 2-dehydropantoate 2-reductase [Sphingobium chlorophenolicum L-1] Length = 328 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 179/325 (55%), Positives = 226/325 (69%), Gaps = 7/325 (2%) Query: 1 MRICIFGAGAVGSHFAVRLARAGHDVSCVMRGPHLDAVRTSGLTLKVGDTSVSAKVKASA 60 M+I I+GAGAVG HFA RLA AGHDVS V+RG L A+R+ GLTL G ++ V AS Sbjct: 4 MKIAIYGAGAVGGHFAARLAAAGHDVSVVVRGAALAAIRSKGLTLLAGTDRLNLSVSASD 63 Query: 61 DPADLGPQDIVISTLKATGIGALATGLPPLLQRDTSIVFAQNGIPWWYDLGLPPQHPAIP 120 D A+LGPQD+VISTLK++ +GALA G+ PLL DT ++FAQNGIPWWY GLPP +P Sbjct: 64 DAAELGPQDLVISTLKSSSLGALAEGVQPLLGPDTPVIFAQNGIPWWYTHGLPPSE-KLP 122 Query: 121 DLGFLDPGGHLRSVIQKERIIGGVIFSSNEVIAPGVVANLSPDRNRLMIGECDDRQGERI 180 L +LDP G L I +R IGGVIFSSNEV+ PGV+ N SP+ N L+IGE D +RI Sbjct: 123 RLDWLDPDGSLERRIGVQRTIGGVIFSSNEVLEPGVIRNDSPEHNALIIGEPDRSDSDRI 182 Query: 181 ATLRAALNDAAIESPEVKQIRETIWSKLLTNMSMSVLCLLTGLTARGVRDDPDMQDVIPR 240 LR L DA + SP +RE +W KLL NM++SVLC++TG TAR +DP QD++PR Sbjct: 183 GRLRQVLGDAGLASPPNGDVREMLWRKLLANMTVSVLCMITGQTAREAVEDPIFQDLVPR 242 Query: 241 LLDEANVVA---THYIPEVKRITRSGPAPDHKPSILQDYELGRAMEIDVLVRAPATFARA 297 L+ EA ++ + IP + R APDHKPS+LQD+ LGRA+EID LVRAP FARA Sbjct: 243 LIGEAGAISGAQGYAIPPMPPGYR---APDHKPSLLQDFLLGRALEIDALVRAPIAFARA 299 Query: 298 AAISTPMLDLMAALAIQKARDKGLY 322 A + TP LD++ A+A + A + GLY Sbjct: 300 AGLETPTLDMLGAVAQRLAVNAGLY 324 >ref|YP_003559451.1| 2-dehydropantoate 2-reductase [Sphingobium japonicum UT26S] dbj|BAI98719.1| 2-dehydropantoate 2-reductase [Sphingobium japonicum UT26S] Length = 318 Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 168/316 (53%), Positives = 215/316 (68%), Gaps = 7/316 (2%) Query: 11 VGSHFAVRLARAGHDVSCVMRGPHLDAVRTSGLTLKVGDTSVSAKVKASADPADLGPQDI 70 +G HFA RLA AGH+VS V+RG L A+R GLTL G + +VKAS DPADLG QD+ Sbjct: 1 MGGHFAARLAAAGHEVSIVVRGAALAAIRARGLTLLSGPERLDVRVKASDDPADLGHQDL 60 Query: 71 VISTLKATGIGALATGLPPLLQRDTSIVFAQNGIPWWYDLGLPPQHPAIPDLGFLDPGGH 130 VISTLK++ + LA G+ PLL DT +VFAQNGIPWWY GLP Q P +P L +LDPGG Sbjct: 61 VISTLKSSSLHVLAEGVQPLLAPDTPVVFAQNGIPWWYTHGLP-QSPLLPRLRWLDPGGA 119 Query: 131 LRSVIQKERIIGGVIFSSNEVIAPGVVANLSPDRNRLMIGECDDRQGERIATLRAALNDA 190 L + R IGGVIFSSNEV+ PGVV N SP+ N L +GE D + +RI LR L DA Sbjct: 120 LEEHVGLRRTIGGVIFSSNEVMEPGVVRNDSPEYNALFVGEPDRSESDRIVKLRTILADA 179 Query: 191 AIESPEVKQIRETIWSKLLTNMSMSVLCLLTGLTARGVRDDPDMQDVIPRLLDEANVVAT 250 + SP +RE +W KL+ NM++SVLC++TG TAR +DP D +PRL+ EA +A Sbjct: 180 RLASPSHHDLREVLWRKLIANMTVSVLCMITGQTAREAVEDPIFGDTVPRLMAEAVAIAA 239 Query: 251 ---HYIPEVKRITRSGPAPDHKPSILQDYELGRAMEIDVLVRAPATFARAAAISTPMLDL 307 + IP + R APDHKPS+LQD+ LGR +E+D LV+AP FARAA +++P LD+ Sbjct: 240 AQGYSIPPMPPGYR---APDHKPSLLQDFLLGRTLEMDALVKAPMAFARAAGLASPTLDM 296 Query: 308 MAALAIQKARDKGLYQ 323 + ALA + A + GLY+ Sbjct: 297 LGALAQRLAANAGLYR 312 >ref|ZP_02188274.1| 2-dehydropantoate 2-reductase [alpha proteobacterium BAL199] gb|EDP64991.1| 2-dehydropantoate 2-reductase [alpha proteobacterium BAL199] Length = 339 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 158/327 (48%), Positives = 207/327 (63%), Gaps = 3/327 (0%) Query: 1 MRICIFGAGAVGSHFAVRLARAGHDVSCVMRGPHLDAVRTSGLTLKVGDTSVSAKVKASA 60 MR+C+FG GA+G H A RLA GH VS V RG L VR+ GL L+ T+ SA++ S Sbjct: 12 MRVCVFGLGAIGGHIAARLAADGHQVSAVARGETLARVRSEGLVLRSRGTTFSARLNLSD 71 Query: 61 DPADLGPQDIVISTLKATGIGALATGLPPLLQRDTSIVFAQNGIPWWYDLGLPPQHPAIP 120 DPA LGPQD+VIST+K T + LA + PLL DT +VFAQNGIPWWY G+ P P P Sbjct: 72 DPAALGPQDVVISTVKTTALPDLAASVGPLLGPDTVVVFAQNGIPWWYADGIAPPRPQPP 131 Query: 121 DLGFLDPGGHLRSVIQKERIIGGVIFSSNEVIAPGVVANLSPDRNRLMIGECDDRQGERI 180 DL LDP G L + + ER IG VI SSN ++ PGVV + + RN L+IG DDR + Sbjct: 132 DLPRLDPAGVLAAAVASERTIGAVIHSSNTMMEPGVVLHENDSRNTLLIGRPDDRGDASV 191 Query: 181 ATLRAALNDAAIESPEVKQIRETIWSKLLTNMSMSVLCLLTGLTARGVRDDPDMQDVIPR 240 LR LN A I+SP V IR+ IW KLL NM++S++CL+TG A VRDD + + R Sbjct: 192 DALRKMLNSAGIDSPPVADIRQAIWDKLLVNMTVSIICLITGQRATVVRDDERIGAMFVR 251 Query: 241 LLDEANVVATHYIPEVKRITRSG---PAPDHKPSILQDYELGRAMEIDVLVRAPATFARA 297 E VA+ + +V + APDH PSI QDY+ GR +E+D ++ AP FARA Sbjct: 252 AAREGMAVASAHGIDVSQFEPEAFRPKAPDHMPSIRQDYDRGRPLELDTMLLAPIAFARA 311 Query: 298 AAISTPMLDLMAALAIQKARDKGLYQD 324 A I TP LD +AA+A++++ D+ L ++ Sbjct: 312 AGIDTPTLDALAAIAVRQSLDRQLQRN 338 >ref|ZP_06898227.1| 2-dehydropantoate 2-reductase [Roseomonas cervicalis ATCC 49957] gb|EFH10081.1| 2-dehydropantoate 2-reductase [Roseomonas cervicalis ATCC 49957] Length = 326 Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 133/330 (40%), Positives = 182/330 (55%), Gaps = 13/330 (3%) Query: 1 MRICIFGAGAVGSHFAVRLARAGHDVSCVMRGPHLDAVRTSGLTLKVGDTSVSAKVKASA 60 M+IC+FGAGA+G H AVRLA+ G + S V RG LDA+R +GL ++ D A+V A+ Sbjct: 1 MKICVFGAGAIGGHLAVRLAKGGAETSVVARGAQLDAIRRNGLAIEAPDGRFEARV-AAG 59 Query: 61 DPADLGPQDIVISTLKATGIGALATGLPPLLQRDTSIVFAQNGIPWWYDLGLPPQHPAIP 120 A+LGPQD VI T+KA + +A + PLL DT++ F NGIPWWY +H Sbjct: 60 SAAELGPQDAVIVTVKAPSLPQMAESIAPLLGPDTTVAFVMNGIPWWYF----DRHGGAL 115 Query: 121 D---LGFLDPGGHLRSVIQKERIIGGVIFSSNEVIAPGVVANLSPDRNRLMIGECDDRQG 177 D L +DPG +R+ I R +GGV++S+ V PGVV + NR+++GE D Sbjct: 116 DGRRLPAVDPGDAVRNAIGVGRTLGGVVYSACTVTEPGVV-KVEHANNRVILGEVDGSLS 174 Query: 178 ERIATLRAALNDAAIESPEVKQIRETIWSKLLTNMSMSVLCLLTGLTARGVRDDPDMQDV 237 R L AL+ + IR +W KL+ N++ +L+ G DP ++ Sbjct: 175 PRAQALADALSAGGVSGEVTPSIRREVWMKLMGNLAQGPFTILSRQGIGGTLADPAVRAA 234 Query: 238 IPRLLDEANVVA----THYIPEVKRITRSGPAPDHKPSILQDYELGRAMEIDVLVRAPAT 293 I R + EA +A + E+++ + HKPSILQD ELGR MEID L R P Sbjct: 235 IKRAMQEAMAIAEALGQGFEFELEKRIAASSRLAHKPSILQDLELGRPMEIDALFRVPLE 294 Query: 294 FARAAAISTPMLDLMAALAIQKARDKGLYQ 323 AR A + TP LDL ALA Q A GLY+ Sbjct: 295 LARLAGVETPTLDLSVALATQAATAAGLYR 324