BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0065.p (454 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766754.1| hypothetical protein bll0114 [Bradyrhizobium ja... 743 0.0 ref|YP_004618903.1| hypothetical protein Rta_17940 [Ramlibacter ... 578 e-162 gb|EGP45937.1| pyridine nucleotide-disulfide oxidoreductase fami... 560 e-157 gb|EFV84826.1| membrane protein [Achromobacter xylosoxidans C54] 539 e-151 ref|YP_003981907.1| pyridine nucleotide-disulfide oxidoreductase... 525 e-147 >ref|NP_766754.1| hypothetical protein bll0114 [Bradyrhizobium japonicum USDA 110] dbj|BAC45379.1| bll0114 [Bradyrhizobium japonicum USDA 110] Length = 454 Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/454 (84%), Positives = 414/454 (91%), Gaps = 1/454 (0%) Query: 2 MRASTIEEPARQVPVYGEYDVVVLGGGPAGIAAAVGAARAGRRTLLIERYGFLGGMGTAA 61 MRA+TIEEPARQVP+YGEY+VVVLGGGPAGI AA AARAGR+TLLIERYGFLGGMGTAA Sbjct: 1 MRATTIEEPARQVPLYGEYEVVVLGGGPAGIIAAASAARAGRKTLLIERYGFLGGMGTAA 60 Query: 62 GVTNFCGLHANIFGEMHRVVQGIASDLLARIDRLGGLNAPHLILGKIFAQAYDTAAYKIA 121 GVTNFCGLH N++G+ HR+VQG+AS+LLARID L GLN PHLILGK+FAQAYDTAAYKIA Sbjct: 61 GVTNFCGLHGNVYGQAHRLVQGLASELLARIDLLNGLNTPHLILGKVFAQAYDTAAYKIA 120 Query: 122 ADDLLAHHKVDILFHALGAGVVM-DGSHIRALMVETKAGRQAVRAGIFIDCSGDGDLAVW 180 AD+LLA HKV+ILFHALGAGVVM D S I ALMVETKAGRQAVR+ IFIDCSGDGDLAVW Sbjct: 121 ADELLASHKVNILFHALGAGVVMGDNSRIDALMVETKAGRQAVRSEIFIDCSGDGDLAVW 180 Query: 181 AGAPHEVGDNQGGMLYPSMMFRLNGIDPAKAGDAWRTIPERMAQAEAAGTHKFPRKSAIV 240 AGAP EVGD G LYPSMM RLN IDP KAG+AWRTIP+ M +A AAGTHKFPRKSAIV Sbjct: 181 AGAPFEVGDEHGHPLYPSMMLRLNNIDPEKAGEAWRTIPQLMEKALAAGTHKFPRKSAIV 240 Query: 241 RPQKSQIEWRVNFTQVTRNDGGAISGIDPDDMTRGEIEGRRQAVEAFKFLRTVPGFENSY 300 RPQKS IEWRVNFTQV R DG AI+GI+PDD+TRGEIEGRRQA+ AF+FLRTVPGFE SY Sbjct: 241 RPQKSGIEWRVNFTQVAREDGHAINGIEPDDLTRGEIEGRRQALAAFEFLRTVPGFEKSY 300 Query: 301 IVDLPPQLGIRETRRVIGGYMLSGEDVLGCASFEDSIGVNGWPKESHVPGDVIFEFPPIP 360 IVDLPPQLGIRETRR+ GGY LSGEDVLGCASFEDSIGVNGWP E+HVPGDVIF FPPIP Sbjct: 301 IVDLPPQLGIRETRRIKGGYQLSGEDVLGCASFEDSIGVNGWPIEAHVPGDVIFTFPPIP 360 Query: 361 ESRGYNELPYRMLVPEGVDNLLIAGRCASMTHEGQSAARVSGACFVMGEAAGTAAALALS 420 ESRGYNELPYRMLVPEGVDNLL+AGRCASMTHEGQSAARVSGACFVMGEAAG+AAALALS Sbjct: 361 ESRGYNELPYRMLVPEGVDNLLVAGRCASMTHEGQSAARVSGACFVMGEAAGSAAALALS 420 Query: 421 GNTIPRDISVEKLQQQLGKQGAFIGRDQAVPEGL 454 GN IPRDI +EKLQ+ L +QGAFIGRDQ VPEGL Sbjct: 421 GNRIPRDIPIEKLQETLKQQGAFIGRDQPVPEGL 454 >ref|YP_004618903.1| hypothetical protein Rta_17940 [Ramlibacter tataouinensis TTB310] gb|AEG92884.1| conserved hypothetical protein [Ramlibacter tataouinensis TTB310] Length = 449 Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust. Identities = 298/447 (66%), Positives = 351/447 (78%), Gaps = 1/447 (0%) Query: 1 MMRASTIEEPARQVPVYGEYDVVVLGGGPAGIAAAVGAARAGRRTLLIERYGFLGGMGTA 60 M + + + EP+RQ PV GE+DVVVLGGGPAG+AAAV AA AGR TLLIERYGFLGGMGTA Sbjct: 1 MTQPAALTEPSRQTPVLGEWDVVVLGGGPAGMAAAVAAAHAGRSTLLIERYGFLGGMGTA 60 Query: 61 AGVTNFCGLHANIFGEMHRVVQGIASDLLARIDRLGGLNAPHLILGKIFAQAYDTAAYKI 120 AGVTNFCGLHAN+ G++ +VV G+A DLLARIDRLGGLNAPH + GK AQAYDTAAYKI Sbjct: 61 AGVTNFCGLHANVHGDIRQVVHGVADDLLARIDRLGGLNAPHALFGKTVAQAYDTAAYKI 120 Query: 121 AADDLLAHHKVDILFHALGAGVVMDG-SHIRALMVETKAGRQAVRAGIFIDCSGDGDLAV 179 AADDLL V +LFHAL GVVM+G + AL+VET++GR+AVR F+D SGDGDLA Sbjct: 121 AADDLLLSAGVQLLFHALAVGVVMEGPRQLSALLVETRSGRRAVRGRCFVDASGDGDLAA 180 Query: 180 WAGAPHEVGDNQGGMLYPSMMFRLNGIDPAKAGDAWRTIPERMAQAEAAGTHKFPRKSAI 239 WAGAP E+GD QG MLYPS MFRLNGIDPA+AG AW IP+ M QA+A G ++FPRK+ I Sbjct: 181 WAGAPWELGDGQGNMLYPSTMFRLNGIDPARAGRAWEAIPKLMLQAQAEGRYRFPRKTPI 240 Query: 240 VRPQKSQIEWRVNFTQVTRNDGGAISGIDPDDMTRGEIEGRRQAVEAFKFLRTVPGFENS 299 VRPQKS IEWRVN TQ+ DG A++G+D +++ EI GRRQ E FLR VPGFE S Sbjct: 241 VRPQKSGIEWRVNLTQLANRDGNAMNGVDAAELSEAEILGRRQIAEVAGFLREVPGFEAS 300 Query: 300 YIVDLPPQLGIRETRRVIGGYMLSGEDVLGCASFEDSIGVNGWPKESHVPGDVIFEFPPI 359 YIVD+ PQ+GIRETRRV G Y L+ DVL CASF+D++GVNGWP E H+ GDV F +P I Sbjct: 301 YIVDIAPQVGIRETRRVRGLYQLTEADVLDCASFDDTVGVNGWPLELHLKGDVEFRWPRI 360 Query: 360 PESRGYNELPYRMLVPEGVDNLLIAGRCASMTHEGQSAARVSGACFVMGEAAGTAAALAL 419 PESRG+N LPYRM VP G DNL +AGRCASM+HE QSAARV+GACFVMG+AAGTAA LAL Sbjct: 361 PESRGFNHLPYRMTVPVGFDNLWVAGRCASMSHEAQSAARVTGACFVMGQAAGTAADLAL 420 Query: 420 SGNTIPRDISVEKLQQQLGKQGAFIGR 446 S + V +LQQ+L A++G+ Sbjct: 421 SAGVPAGSVDVAQLQQRLEAASAYLGQ 447 >gb|EGP45937.1| pyridine nucleotide-disulfide oxidoreductase family protein 9 [Achromobacter xylosoxidans AXX-A] Length = 450 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 282/446 (63%), Positives = 337/446 (75%), Gaps = 6/446 (1%) Query: 6 TIEEPARQVPVYGEYDVVVLGGGPAGIAAAVGAARAGRRTLLIERYGFLGGMGTAAGVTN 65 T+ EPARQVP+YGEYDVVVLGGGPAGI AA AAR G LL+ERYGFLGGMGTAAGV+N Sbjct: 2 TLTEPARQVPLYGEYDVVVLGGGPAGILAAASAARNGASVLLVERYGFLGGMGTAAGVSN 61 Query: 66 FCGLHANIFGEMHRVVQGIASDLLARIDRLGGLNAPHLILGKIFAQAYDTAAYKIAADDL 125 FCGLHANI G + +VV G+ DLL R+ L GLN PHLILGKI AQAYD AA+K AAD + Sbjct: 62 FCGLHANIRGTIRQVVHGMTDDLLDRMRALDGLNDPHLILGKIHAQAYDIAAFKCAADGM 121 Query: 126 LAHHKVDILFHALGAGVVMDGS-HIRALMVETKAGRQAVRAGIFIDCSGDGDLAVWAGAP 184 + ILFHAL G+ D + ++ AL +ETK+GR AVR +FIDCSGD D+A W G P Sbjct: 122 VQDSGARILFHALATGLARDAAGNVDALFLETKSGRCAVRGKVFIDCSGDADIAHWGGLP 181 Query: 185 HEVGDNQGGMLYPSMMFRLNGIDPAKAGDAWRTIPERMAQAEAAGTHKFPRKSAIVRPQK 244 E GD QG MLYP++MF++ +D A+A +AW+TIP+ M QA +G FPR+ AIVRPQK Sbjct: 182 FEKGDAQGHMLYPTLMFKVGNVDGARAQEAWKTIPQLMDQAATSGEFTFPRRGAIVRPQK 241 Query: 245 SQIEWRVNFTQVTRNDGGAISGIDPDDMTRGEIEGRRQAVEAFKFLRT-VPGFENSYIVD 303 EWRVN TQ+ DG A G D ++ GE+EGRRQ E KFLR VPGFEN+Y++D Sbjct: 242 HDYEWRVNVTQLANADGSAADGTDAASLSAGELEGRRQITEYLKFLRAKVPGFENAYVLD 301 Query: 304 LPPQLGIRETRRVIGGYMLSGEDVLGCASFEDSIGVNGWPKESHVPGDVIFEFPPIPESR 363 + PQLGIRETRR++G ML+ +DVLGCA FEDSIGVNGWP E H GDV + +PPIPESR Sbjct: 302 IAPQLGIRETRRIVGEAMLTKDDVLGCADFEDSIGVNGWPLEMHTAGDVQWMWPPIPESR 361 Query: 364 GYNELPYRMLVPE---GV-DNLLIAGRCASMTHEGQSAARVSGACFVMGEAAGTAAALAL 419 GYN+LP+RM+VP GV N+L+AGRCASMTHEGQSAARVSG+CFVMGEAAGTA+ALAL Sbjct: 362 GYNQLPFRMMVPRRGPGVAGNVLVAGRCASMTHEGQSAARVSGSCFVMGEAAGTASALAL 421 Query: 420 SGNTIPRDISVEKLQQQLGKQGAFIG 445 P D+ + LQ QL +QGAF+G Sbjct: 422 RAGIAPADLPIATLQAQLQRQGAFLG 447 >gb|EFV84826.1| membrane protein [Achromobacter xylosoxidans C54] Length = 450 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 283/449 (63%), Positives = 339/449 (75%), Gaps = 6/449 (1%) Query: 6 TIEEPARQVPVYGEYDVVVLGGGPAGIAAAVGAARAGRRTLLIERYGFLGGMGTAAGVTN 65 T+ EPARQVP+YGEYDVVVLGGGPAGI AA AAR G LL+ERYGFLGGMGTAAGV+N Sbjct: 2 TLTEPARQVPLYGEYDVVVLGGGPAGILAAASAARNGASVLLVERYGFLGGMGTAAGVSN 61 Query: 66 FCGLHANIFGEMHRVVQGIASDLLARIDRLGGLNAPHLILGKIFAQAYDTAAYKIAADDL 125 FCGLHAN+ G + +VV G+ +LL R+ L GLN PHLILGKI AQAYD AA+K AAD + Sbjct: 62 FCGLHANVRGAIRQVVHGMTDELLDRMRALDGLNDPHLILGKIHAQAYDIAAFKCAADGM 121 Query: 126 LAHHKVDILFHALGAGVVMDGS-HIRALMVETKAGRQAVRAGIFIDCSGDGDLAVWAGAP 184 + ILFHAL G+ D + ++ AL +ETK+GR AVR +FIDCSGD D+A W G P Sbjct: 122 VQDSGAQILFHALATGLARDAAGNVDALFLETKSGRCAVRGKVFIDCSGDADIAQWGGLP 181 Query: 185 HEVGDNQGGMLYPSMMFRLNGIDPAKAGDAWRTIPERMAQAEAAGTHKFPRKSAIVRPQK 244 E GD QG MLYP++MF++ +D A+A +AW+TIP+ M QA A+G FPR+ AIVRPQK Sbjct: 182 FEKGDAQGHMLYPTLMFKVGNVDGARAQEAWKTIPQLMDQAAASGEFTFPRRGAIVRPQK 241 Query: 245 SQIEWRVNFTQVTRNDGGAISGIDPDDMTRGEIEGRRQAVEAFKFLRT-VPGFENSYIVD 303 EWRVN TQ+ DG A G D ++ GE+EGRRQ E KFLR VPGFEN+Y++D Sbjct: 242 HDYEWRVNVTQLANADGSAADGTDAASLSAGELEGRRQITEYLKFLRAKVPGFENAYVLD 301 Query: 304 LPPQLGIRETRRVIGGYMLSGEDVLGCASFEDSIGVNGWPKESHVPGDVIFEFPPIPESR 363 + PQLGIRETRR++G ML+ EDVLGCA FEDSIGVNGWP E H GDV + +PPIP SR Sbjct: 302 IAPQLGIRETRRIVGEAMLTKEDVLGCADFEDSIGVNGWPLEMHTAGDVQWLWPPIPGSR 361 Query: 364 GYNELPYRMLVPE---GV-DNLLIAGRCASMTHEGQSAARVSGACFVMGEAAGTAAALAL 419 GYN+LP+RM+VP GV N+L+AGRCASMTHEGQSAARVSG+CFVMGEAAGTAAA+AL Sbjct: 362 GYNQLPFRMMVPRRGPGVAANVLVAGRCASMTHEGQSAARVSGSCFVMGEAAGTAAAMAL 421 Query: 420 SGNTIPRDISVEKLQQQLGKQGAFIGRDQ 448 P D+ V LQ QL +QGAF+GR + Sbjct: 422 RDGNAPADVPVAALQAQLQRQGAFLGRQE 450 >ref|YP_003981907.1| pyridine nucleotide-disulfide oxidoreductase family protein 9 [Achromobacter xylosoxidans A8] gb|ADP19192.1| pyridine nucleotide-disulfide oxidoreductase family protein 9 [Achromobacter xylosoxidans A8] Length = 450 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 280/445 (62%), Positives = 336/445 (75%), Gaps = 6/445 (1%) Query: 7 IEEPARQVPVYGEYDVVVLGGGPAGIAAAVGAARAGRRTLLIERYGFLGGMGTAAGVTNF 66 I EPARQVP+YGEYDVVVLGGGPAG+ AA AAR G LL+ERYGFLGGMGTAAGV+NF Sbjct: 3 ITEPARQVPLYGEYDVVVLGGGPAGLLAAASAARNGASVLLVERYGFLGGMGTAAGVSNF 62 Query: 67 CGLHANIFGEMHRVVQGIASDLLARIDRLGGLNAPHLILGKIFAQAYDTAAYKIAADDLL 126 CGLHANI G + +VV G+ +LL R+ L GLN PHLILGKI AQAYD +A+K AAD L+ Sbjct: 63 CGLHANIRGNIRQVVHGMTDELLDRMRALDGLNDPHLILGKIHAQAYDISAFKCAADGLV 122 Query: 127 AHHKVDILFHALGAGVVMD-GSHIRALMVETKAGRQAVRAGIFIDCSGDGDLAVWAGAPH 185 +LFHAL GV G + AL +ETK+GR AVRA IFIDCSGD D+A W G P Sbjct: 123 QASGAQVLFHALATGVASGAGGSVDALFLETKSGRCAVRARIFIDCSGDADIAQWGGLPF 182 Query: 186 EVGDNQGGMLYPSMMFRLNGIDPAKAGDAWRTIPERMAQAEAAGTHKFPRKSAIVRPQKS 245 E GD GGMLYP++MF++ +D A+A +AW+TIP+ M QA A+G FPR+ AIVRPQK Sbjct: 183 EKGDEHGGMLYPTLMFKVGNVDGARAQEAWKTIPQLMDQAAASGEFTFPRRGAIVRPQKH 242 Query: 246 QIEWRVNFTQVTRNDGGAISGIDPDDMTRGEIEGRRQAVEAFKFLRT-VPGFENSYIVDL 304 EWRVN TQ+ DG A G D + ++ GE+EGRRQ V+ FLR VPGFE++Y++D+ Sbjct: 243 DYEWRVNVTQLANADGSAADGTDANSLSAGELEGRRQIVQYLAFLRAKVPGFEHAYVLDI 302 Query: 305 PPQLGIRETRRVIGGYMLSGEDVLGCASFEDSIGVNGWPKESHVPGDVIFEFPPIPESRG 364 PQLGIRETRR++G +LS +DVLGCA F DSIGVNGWP E H GDV + +PPIPESRG Sbjct: 303 APQLGIRETRRIVGEAVLSKDDVLGCADFPDSIGVNGWPLEMHTAGDVQWLWPPIPESRG 362 Query: 365 YNELPYRMLVPE---GV-DNLLIAGRCASMTHEGQSAARVSGACFVMGEAAGTAAALALS 420 YN+LP+RM+VP+ GV N+L+AGRCASMTHEGQSAARVSG+CFVMGEAAGTAAA+AL Sbjct: 363 YNQLPFRMMVPKRAPGVAGNVLVAGRCASMTHEGQSAARVSGSCFVMGEAAGTAAAMALR 422 Query: 421 GNTIPRDISVEKLQQQLGKQGAFIG 445 P D+ + LQ QL KQG F+G Sbjct: 423 AGIAPGDVPIPALQAQLVKQGVFLG 447