BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0064.p (334 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766753.1| ABC transporter substrate-binding protein [Brad... 586 e-165 ref|YP_001243262.1| ABC transporter substrate-binding protein [B... 505 e-141 ref|YP_001202849.1| ABC transporter substrate-binding protein [B... 498 e-139 ref|YP_003447736.1| hypothetical protein AZL_005540 [Azospirillu... 282 6e-74 ref|NP_769274.1| hypothetical protein bll2634 [Bradyrhizobium ja... 277 2e-72 >ref|NP_766753.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45378.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 334 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 288/334 (86%), Positives = 308/334 (92%) Query: 1 MMGWARLALAGLLVWAASGLARADDLLKAKIGVLRLSSSAPVFIAQDKGYFRDAGLDVEL 60 M+G ARLALAGL+ A G A+A+D LKA+IGVLRLSSSAPVFIAQDKGYFR+AGLDVEL Sbjct: 1 MIGIARLALAGLVAIMAMGAAQAEDALKARIGVLRLSSSAPVFIAQDKGYFREAGLDVEL 60 Query: 61 KFFDAAQPIAVATASGDVDFGITAVTAGLYNLAGKGALKVIGGMSREKAGYPLIGYFASN 120 KFFDAAQPIAVAT SGDVDFG+TA TAGLYNLAGKG LKVIGGMSREKAGYPLIGYFASN Sbjct: 61 KFFDAAQPIAVATTSGDVDFGVTAFTAGLYNLAGKGVLKVIGGMSREKAGYPLIGYFASN 120 Query: 121 NAYASGLKTPKDLAGKRVAVTQVGSSFHYSLGLLADKYGFKLSDVKVVPLQSLSNAAAAL 180 NAYA+GLKTPKDLAGKRVAVTQVGSSFHYSLGLLADKYGFKL+DVK++PLQSLSNAAAAL Sbjct: 121 NAYAAGLKTPKDLAGKRVAVTQVGSSFHYSLGLLADKYGFKLADVKIIPLQSLSNAAAAL 180 Query: 181 KGETVDAALLPVSTARTLMDSNGAKLLGWVGDETPWQLGAIFASPKALTNAPLVTRLLTA 240 KGETVDAALLP+STAR LMD GAK LGWVGDETPWQLGA+FASPK LTN LVT+LL A Sbjct: 181 KGETVDAALLPISTARKLMDEGGAKFLGWVGDETPWQLGAVFASPKTLTNKALVTKLLGA 240 Query: 241 LTRADHEYHDVILTAIKDGVAPINDKTKPLLEIIAKYTNLPVAQVVGNCAYIDPDGKLDV 300 L +AD EYHDVIL A+KDGVAP+N++TKPLLEIIAKYTNLPV QVVGNCAYIDPDGKLDV Sbjct: 241 LAKADREYHDVILAAMKDGVAPVNEQTKPLLEIIAKYTNLPVEQVVGNCAYIDPDGKLDV 300 Query: 301 KNLDNQIKWLQGQGFVDKGFDANAIIAKDYVKGD 334 KN+DNQIKWLQ QGF DKGFDAN IIAKDYVK D Sbjct: 301 KNVDNQIKWLQEQGFADKGFDANTIIAKDYVKAD 334 >ref|YP_001243262.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ39356.1| Putative ABC transporter, substrate-binding protein [Bradyrhizobium sp. BTAi1] Length = 333 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 250/334 (74%), Positives = 287/334 (85%), Gaps = 1/334 (0%) Query: 1 MMGWARLALAGLLVWAASGLARADDLLKAKIGVLRLSSSAPVFIAQDKGYFRDAGLDVEL 60 M G+A++ L L A+ ARAD+ K +IGVLRLSSSAPVFIA DKGYFRDAGLDVEL Sbjct: 1 MFGYAKVVLGTFLALASIAAARADET-KLRIGVLRLSSSAPVFIALDKGYFRDAGLDVEL 59 Query: 61 KFFDAAQPIAVATASGDVDFGITAVTAGLYNLAGKGALKVIGGMSREKAGYPLIGYFASN 120 KFFDAAQPIAVATA+GDVD G+TA TAGLYNLAGKGALK+IGGMSR++ G+PLIGYFASN Sbjct: 60 KFFDAAQPIAVATATGDVDVGVTAFTAGLYNLAGKGALKIIGGMSRDRPGFPLIGYFASN 119 Query: 121 NAYASGLKTPKDLAGKRVAVTQVGSSFHYSLGLLADKYGFKLSDVKVVPLQSLSNAAAAL 180 AY SGLKTPKD+AGKRVA+TQVGSSFHYS+GLLA+KYGFKL+DVK+VPLQS+SN AAA+ Sbjct: 120 KAYESGLKTPKDIAGKRVAMTQVGSSFHYSVGLLAEKYGFKLADVKIVPLQSMSNMAAAI 179 Query: 181 KGETVDAALLPVSTARTLMDSNGAKLLGWVGDETPWQLGAIFASPKALTNAPLVTRLLTA 240 KGETVDAAL+PVS AR LMD K LGWVGDETPWQ+ +FA PK L NA V++LL + Sbjct: 180 KGETVDAALMPVSAARKLMDEGAIKHLGWVGDETPWQVSGVFAGPKTLANAASVSKLLAS 239 Query: 241 LTRADHEYHDVILTAIKDGVAPINDKTKPLLEIIAKYTNLPVAQVVGNCAYIDPDGKLDV 300 L RA+ EYHDV+L ++KDG A I+D+TKPLL+I+ KYTNLPV QVVGNCAYIDPDGKLDV Sbjct: 240 LQRAEREYHDVVLASVKDGTAAIDDRTKPLLDIVGKYTNLPVDQVVGNCAYIDPDGKLDV 299 Query: 301 KNLDNQIKWLQGQGFVDKGFDANAIIAKDYVKGD 334 KN+D+QIKWLQ QGF D G+DA AIIAKDYVK D Sbjct: 300 KNIDSQIKWLQAQGFADPGYDAAAIIAKDYVKPD 333 >ref|YP_001202849.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74609.1| Putative ABC transporter, substrate-binding protein [Bradyrhizobium sp. ORS 278] Length = 337 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 239/326 (73%), Positives = 284/326 (87%), Gaps = 1/326 (0%) Query: 9 LAGLLVWAASGLARADDLLKAKIGVLRLSSSAPVFIAQDKGYFRDAGLDVELKFFDAAQP 68 L LL+ A+ A+A+D+ K +IGVLRLSSSAPVFIA DKGYFR+AGLD+ELKFFDAAQP Sbjct: 13 LGALLLGASIAAAQAEDV-KLRIGVLRLSSSAPVFIALDKGYFREAGLDIELKFFDAAQP 71 Query: 69 IAVATASGDVDFGITAVTAGLYNLAGKGALKVIGGMSREKAGYPLIGYFASNNAYASGLK 128 IAVATA+GDVD G+TA TAGLYNLAGKGALK++ GMSR++ G+PLIGYFASN AY +GL+ Sbjct: 72 IAVATATGDVDVGVTAFTAGLYNLAGKGALKIVAGMSRDRPGFPLIGYFASNKAYEAGLR 131 Query: 129 TPKDLAGKRVAVTQVGSSFHYSLGLLADKYGFKLSDVKVVPLQSLSNAAAALKGETVDAA 188 +PKD+AGKRVA+TQVGSSFHYS+GLLADKYGFKL+DVK+VPLQS+SN AAA+KGETVDAA Sbjct: 132 SPKDIAGKRVAMTQVGSSFHYSVGLLADKYGFKLADVKIVPLQSMSNMAAAIKGETVDAA 191 Query: 189 LLPVSTARTLMDSNGAKLLGWVGDETPWQLGAIFASPKALTNAPLVTRLLTALTRADHEY 248 L+PVS AR LM+ K LGWVGDETPWQ+ +FA PK L N +T+LL +L RA+ EY Sbjct: 192 LMPVSVARKLMEEGAIKHLGWVGDETPWQVSGVFAGPKTLANMAALTKLLASLQRAEREY 251 Query: 249 HDVILTAIKDGVAPINDKTKPLLEIIAKYTNLPVAQVVGNCAYIDPDGKLDVKNLDNQIK 308 HDV+LT++KDG A I+DKTKPLLEII KYT+LPV QVVGNCAYIDPDGKLDV+N+D+Q+K Sbjct: 252 HDVVLTSVKDGNAAIDDKTKPLLEIIGKYTSLPVEQVVGNCAYIDPDGKLDVQNIDSQVK 311 Query: 309 WLQGQGFVDKGFDANAIIAKDYVKGD 334 WLQ QGF D+G+DA AIIAKD+VK D Sbjct: 312 WLQTQGFADQGYDAAAIIAKDFVKPD 337 >ref|YP_003447736.1| hypothetical protein AZL_005540 [Azospirillum sp. B510] dbj|BAI71192.1| hypothetical protein AZL_005540 [Azospirillum sp. B510] Length = 341 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 200/334 (59%), Gaps = 9/334 (2%) Query: 2 MGWARLALAGLLVWAASGL--------ARADDLLKAKIGVLRLSSSAPVFIAQDKGYFRD 53 M RL L+ A + L A A L KA +GVL LSSS P+FIA+ KGYF Sbjct: 1 MTLVRLTRRALIATAGAALVTSSLMSAALAQPLEKATVGVLALSSSGPIFIAKAKGYFAK 60 Query: 54 AGLDVELKFFDAAQPIAVATASGDVDFGITAVTAGLYNLAGKGALKVIGGMSREKAGYPL 113 GLDVELK F +AQ + VA SGDVDFG+T +TAG YNLA KGA+ +I SR++ G+PL Sbjct: 61 EGLDVELKMFTSAQQVPVAVTSGDVDFGVTGLTAGFYNLASKGAVTIIAAQSRDEPGFPL 120 Query: 114 IGYFASNNAYASGLKTPKDLAGKRVAVTQVGSSFHYSLGLLADKYGFKLSDVKVVPLQSL 173 Y A+N AY +GLK+P DL GKR+A+T VGS+FHY +GLLA K+GF + DV +VPLQ + Sbjct: 121 SAYLATNAAYDAGLKSPADLKGKRIAITTVGSTFHYMIGLLAKKHGFTVKDVTMVPLQDV 180 Query: 174 SNAAAALKGETVDAALLPVSTARTLMDSNGAKLLGWVGDETPWQLGAIFASPKALTN-AP 232 AA +G VDA + P + +R L+ K+LGWVGDETPWQLGA+F +PK + + P Sbjct: 181 PKMVAAFRGGQVDAIIAPSTVSRQLVADGAGKMLGWVGDETPWQLGALFTAPKTMKDRRP 240 Query: 233 LVTRLLTALTRADHEYHDVILTAIKDGVAPINDKTKPLLEIIAKYTNLPVAQVVGNCAYI 292 LV + + A A EYH G LL IIA T Y+ Sbjct: 241 LVEKFVRAYKTALAEYHAAFNGKDASGALVKGPGYDELLTIIADATKQKPDIAAAGLPYV 300 Query: 293 DPDGKLDVKNLDNQIKWLQGQGFVDKGFDANAII 326 DP +L V ++ NQ+K+ Q +G VDK D +++ Sbjct: 301 DPQARLLVDDIVNQVKFWQSEGQVDKALDPMSVM 334 >ref|NP_769274.1| hypothetical protein bll2634 [Bradyrhizobium japonicum USDA 110] dbj|BAC47899.1| bll2634 [Bradyrhizobium japonicum USDA 110] Length = 344 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 149/320 (46%), Positives = 205/320 (64%), Gaps = 5/320 (1%) Query: 13 LVWAASGLARADDLLKAKIGVLRLSSSAPVFIAQDKGYFRDAGLDVELKFFDAAQPIAVA 72 + + +G+A+A + L+ IG+L+LSS+AP+F+A+++GYF G++ +LKFFDAA PIAVA Sbjct: 21 IAFCTTGMAQAGERLR--IGLLKLSSAAPLFLAKERGYFEQEGIEADLKFFDAAVPIAVA 78 Query: 73 TASGDVDFGITAVTAGLYNLAGKGALKVIGGMSREKAGYPLIGYFASNNAYASGLKTPKD 132 + SGD+D G T TA YNLAGKG LKV+ G +RE G+ Y AS AY SGLKT KD Sbjct: 79 SVSGDIDIGFTGFTAAFYNLAGKGGLKVVAGTAREAPGFQNTAYVASKRAYDSGLKTLKD 138 Query: 133 LAGKRVAVTQVGSSFHYSLGLLADKYGFKLSDVKVVPLQSLSNAAAALKGETVDAALLPV 192 L G V +TQVGS+FHYSLGL+ADK F ++ V+VVPLQSL N AAA+KG +DAAL Sbjct: 139 LPGHSVGITQVGSTFHYSLGLIADKLKFDVTSVRVVPLQSLPNVAAAIKGGQLDAALTAT 198 Query: 193 STARTLMDSNGAKLLGWVGDETPWQLGAIFASPKALT-NAPLVTRLLTALTRADHEYHDV 251 +T ++ S A +LG+VGDETPW LG + AS + N LV ++L R +Y V Sbjct: 199 TTISPVVASGDAIVLGFVGDETPWMLGCVVASTATIEKNRKLVEKVLAVYRRGADDYARV 258 Query: 252 ILTAIKDGVAPINDKTKPLLEIIAKYTNLPVAQVVGNCAYIDPDGKLDVKNLDNQIKWLQ 311 +L DG +++ +L II+KYT V Q+ + +DP LD ++ QI W + Sbjct: 259 LLKRDADGKFVRSEEGDAMLAIISKYTEQKVEQLRIGLSVVDP--ALDSADIARQIAWFK 316 Query: 312 GQGFVDKGFDANAIIAKDYV 331 Q ++ DA II K +V Sbjct: 317 RQKMIEPDIDAEKIIDKSFV 336