BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0054.p (376 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202856.1| putative aromatic-ring hydroxylase [Bradyrhi... 621 e-176 ref|YP_001243255.1| putative aromatic-ring hydroxylase [Bradyrhi... 616 e-174 ref|NP_766746.1| monooxygenase [Bradyrhizobium japonicum USDA 11... 603 e-170 ref|YP_913983.1| monooxygenase, FAD-binding [Paracoccus denitrif... 508 e-142 ref|ZP_05099691.1| benzoate-CoA ligase family [Roseobacter sp. G... 421 e-116 >ref|YP_001202856.1| putative aromatic-ring hydroxylase [Bradyrhizobium sp. ORS 278] emb|CAL74616.1| Putative Aromatic-ring hydroxylase [Bradyrhizobium sp. ORS 278] Length = 379 Score = 621 bits (1601), Expect = e-176, Method: Compositional matrix adjust. Identities = 292/373 (78%), Positives = 327/373 (87%) Query: 1 LRIAVIGGGPGGLYFAYLWKKRHPDAEIDLFEQNAAGATWGFGVVFSEQALDFLRADDPE 60 +RIAV+GGGPGGLYFAYLWKKRHP A +DLFEQN AGATWGFGVVFS+QAL+FLRADDP+ Sbjct: 1 MRIAVLGGGPGGLYFAYLWKKRHPAAVVDLFEQNPAGATWGFGVVFSDQALEFLRADDPD 60 Query: 61 TVDAIAPLMESWKNITLNLRGESVEIDGVGFSSIGRLALLTILQERVRSTGVTPRFDTVV 120 TVDAIAP MESW+NITLNL GESVEIDGVGFS+IGRL LL +LQ R S GV R+ T + Sbjct: 61 TVDAIAPRMESWRNITLNLHGESVEIDGVGFSAIGRLELLKLLQARAESVGVVARYGTPI 120 Query: 121 QSVDQLAGYDLIVAADGLNSMVRRGYESAFGASVSQSSNKFAWYGTTKTFATLSQTFVAT 180 QS+DQLAGYDLIVAADGLNS+VRR +E FG SVS SSNKFAWYGT++TF TLSQTFVAT Sbjct: 121 QSLDQLAGYDLIVAADGLNSLVRRSFEGDFGFSVSYSSNKFAWYGTSRTFPTLSQTFVAT 180 Query: 181 ERGSFNAHHYRYAKDMSTFLVECDAATWAAYGFADKSIEESQAICEEVFAATLDGHRLIS 240 ERG FNAHHYRYA DMSTFLVECD TW AYGFAD S++ES+ ICE+VFA TLDGH L+S Sbjct: 181 ERGMFNAHHYRYAPDMSTFLVECDRTTWQAYGFADMSVDESRRICEQVFAETLDGHSLMS 240 Query: 241 NKSVWRNFPWIWNERWSHGNMVLIGDALHSAHFSIGSGTRLAIEDAIALTKALETESGIA 300 N+SVWRNFPW+WNE W H NMVLIGDALH+AHFSIGSGTRLAIEDAIAL KAL+ + ++ Sbjct: 241 NRSVWRNFPWVWNEHWWHRNMVLIGDALHTAHFSIGSGTRLAIEDAIALAKALDAKGNLS 300 Query: 301 AALARYESERKPIVKKLVTAARTSADWYEHFPAHMKLDLMDFAYSYITRSGRIDDARLRA 360 LA Y++ER+PIVKKLVTAARTSA+WYEHFPAHMKL LMDFAY YITRSGRIDD RLR Sbjct: 301 DGLAHYQAERQPIVKKLVTAARTSAEWYEHFPAHMKLGLMDFAYGYITRSGRIDDTRLRT 360 Query: 361 MSPAFMARYAAAK 373 M+P FMARY A++ Sbjct: 361 MAPQFMARYEASR 373 >ref|YP_001243255.1| putative aromatic-ring hydroxylase [Bradyrhizobium sp. BTAi1] gb|ABQ39349.1| Putative Aromatic-ring hydroxylase [Bradyrhizobium sp. BTAi1] Length = 379 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 289/373 (77%), Positives = 325/373 (87%) Query: 1 LRIAVIGGGPGGLYFAYLWKKRHPDAEIDLFEQNAAGATWGFGVVFSEQALDFLRADDPE 60 +RIAV+GGGPGGLYFAYLWKKRHP A +DLFEQN AGATWGFGVVFS+QAL+FLRADDP+ Sbjct: 1 MRIAVLGGGPGGLYFAYLWKKRHPAAIVDLFEQNPAGATWGFGVVFSDQALEFLRADDPD 60 Query: 61 TVDAIAPLMESWKNITLNLRGESVEIDGVGFSSIGRLALLTILQERVRSTGVTPRFDTVV 120 TVDAIAP MESW+NITL L GESVEIDGVGFS+IGRL LL +LQ R GV+ R+ T + Sbjct: 61 TVDAIAPQMESWRNITLTLHGESVEIDGVGFSAIGRLELLKLLQARAEGVGVSSRYGTPI 120 Query: 121 QSVDQLAGYDLIVAADGLNSMVRRGYESAFGASVSQSSNKFAWYGTTKTFATLSQTFVAT 180 QS+DQL GYDLIVAADGLNS+VRR +E FG SVS SSNKFAWYGT+KTF TLSQTFVAT Sbjct: 121 QSLDQLQGYDLIVAADGLNSLVRRSFEGDFGFSVSYSSNKFAWYGTSKTFPTLSQTFVAT 180 Query: 181 ERGSFNAHHYRYAKDMSTFLVECDAATWAAYGFADKSIEESQAICEEVFAATLDGHRLIS 240 +RG+FNAHHYRYA DMSTFLVECD TW AYGFA+ S++ES+ +CE+VFA LDGH L+S Sbjct: 181 DRGTFNAHHYRYASDMSTFLVECDRTTWQAYGFAEMSVDESRRVCEQVFAPVLDGHALVS 240 Query: 241 NKSVWRNFPWIWNERWSHGNMVLIGDALHSAHFSIGSGTRLAIEDAIALTKALETESGIA 300 N+SVWRNFPW+WNE W H NMVLIGDALH+AHFSIGSGTRLAIEDAIAL KAL+ E + Sbjct: 241 NRSVWRNFPWVWNEHWWHRNMVLIGDALHTAHFSIGSGTRLAIEDAIALVKALDAEDKLP 300 Query: 301 AALARYESERKPIVKKLVTAARTSADWYEHFPAHMKLDLMDFAYSYITRSGRIDDARLRA 360 LARY++ER+PIVKKLVTAARTSA WYE FP HMKLDLMDFAYSYITRSGRIDDARLRA Sbjct: 301 EGLARYQAERQPIVKKLVTAARTSAGWYESFPTHMKLDLMDFAYSYITRSGRIDDARLRA 360 Query: 361 MSPAFMARYAAAK 373 M+P FM RY A++ Sbjct: 361 MAPQFMQRYEASR 373 >ref|NP_766746.1| monooxygenase [Bradyrhizobium japonicum USDA 110] dbj|BAC45371.1| blr0106 [Bradyrhizobium japonicum USDA 110] Length = 380 Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust. Identities = 284/369 (76%), Positives = 319/369 (86%) Query: 5 VIGGGPGGLYFAYLWKKRHPDAEIDLFEQNAAGATWGFGVVFSEQALDFLRADDPETVDA 64 +IGGGPGGLYFAYLWKKRHP+ ++DLFEQN A ATWGFGVVFS+QAL+FLRADDPETVDA Sbjct: 1 MIGGGPGGLYFAYLWKKRHPEDQVDLFEQNPADATWGFGVVFSDQALEFLRADDPETVDA 60 Query: 65 IAPLMESWKNITLNLRGESVEIDGVGFSSIGRLALLTILQERVRSTGVTPRFDTVVQSVD 124 IAP MESW+NITLNL+G SV IDGVGFSSIGRL LL LQ+R GVTPRFDT + +D Sbjct: 61 IAPHMESWENITLNLQGGSVAIDGVGFSSIGRLELLQFLQQRALDVGVTPRFDTQIHGID 120 Query: 125 QLAGYDLIVAADGLNSMVRRGYESAFGASVSQSSNKFAWYGTTKTFATLSQTFVATERGS 184 QL G+DLIVAADGLNS+VRR YE FG S+S SSNKF WYGT+K F TLSQTFV T+RG+ Sbjct: 121 QLNGHDLIVAADGLNSLVRRAYEGDFGTSLSYSSNKFVWYGTSKRFDTLSQTFVKTDRGA 180 Query: 185 FNAHHYRYAKDMSTFLVECDAATWAAYGFADKSIEESQAICEEVFAATLDGHRLISNKSV 244 FNAHHYRY+ MSTFLVECD ATW AYGFA K +E+S+ +CEEVFA TL GH L+SNKSV Sbjct: 181 FNAHHYRYSPTMSTFLVECDHATWQAYGFAYKDVEQSKGVCEEVFADTLGGHCLVSNKSV 240 Query: 245 WRNFPWIWNERWSHGNMVLIGDALHSAHFSIGSGTRLAIEDAIALTKALETESGIAAALA 304 WRNFPW+WNE WS NMVLIGDALHSAHFSIGSGTRLAIEDAIAL KALE+++ + AL Sbjct: 241 WRNFPWVWNEHWSFKNMVLIGDALHSAHFSIGSGTRLAIEDAIALVKALESDAHLNTALL 300 Query: 305 RYESERKPIVKKLVTAARTSADWYEHFPAHMKLDLMDFAYSYITRSGRIDDARLRAMSPA 364 RY++ RKP+V+KLV AARTSA WYE+F HM+LDLMDFAYSYITRSGRIDD+RLRAMSPA Sbjct: 301 RYQAARKPVVQKLVDAARTSASWYENFAQHMQLDLMDFAYSYITRSGRIDDSRLRAMSPA 360 Query: 365 FMARYAAAK 373 FMARY AAK Sbjct: 361 FMARYEAAK 369 >ref|YP_913983.1| monooxygenase, FAD-binding [Paracoccus denitrificans PD1222] gb|ABL68287.1| monooxygenase, FAD-binding protein [Paracoccus denitrificans PD1222] Length = 381 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 244/373 (65%), Positives = 287/373 (76%), Gaps = 1/373 (0%) Query: 2 RIAVIGGGPGGLYFAYLWKKRHPDAEIDLFEQNAAGATWGFGVVFSEQALDFLRADDPET 61 RIAV+GGGPGGLYFAYLWK RHP + LFEQN GAT+GFGVVFS++A+DFLRADDPET Sbjct: 3 RIAVLGGGPGGLYFAYLWKSRHPADSVTLFEQNPEGATFGFGVVFSDRAMDFLRADDPET 62 Query: 62 VDAIAPLMESWKNITLNLRGESVEIDGVGFSSIGRLALLTILQERVRSTGVTPRFDTVVQ 121 D I ME+W +ITL G+ V IDGVGFS+IGRL L+ ++QER R GV RF TV+ Sbjct: 63 ADRITEKMETWSDITLVHHGQRVTIDGVGFSAIGRLELILLMQERARDAGVDLRFGTVIG 122 Query: 122 SVDQLAGYDLIVAADGLNSMVRRGYESAFGASVSQSSNKFAWYGTTKTFATLSQTFVATE 181 SV +LA YD+IVAADG+NS+VRR +E F S+S KFAW+GTTK F TL+QTFV E Sbjct: 123 SVAELADYDVIVAADGVNSLVRRSFEGDFQTSISYLDEKFAWFGTTKRFETLTQTFVTCE 182 Query: 182 RGSFNAHHYRYAKDMSTFLVECDAATWAAYGFADKSIEESQAICEEVFAATLDGHRLISN 241 G+FNAHHYRY+ MSTF+VECD A+W GF +E++ CEE+FA LDGH L++N Sbjct: 183 HGTFNAHHYRYSPTMSTFIVECDRASWLKAGFDQLGPDEAKTRCEEIFAEALDGHGLVAN 242 Query: 242 KSVWRNFPWIWNERWSHGNMVLIGDALHSAHFSIGSGTRLAIEDAIALTKALETESG-IA 300 KS WRNFPWIWN+RWSH NMVLIGDALH+AH+SIGSGTRLA+ED AL ALE G Sbjct: 243 KSNWRNFPWIWNDRWSHRNMVLIGDALHTAHYSIGSGTRLALEDVQALVAALEAHPGDPG 302 Query: 301 AALARYESERKPIVKKLVTAARTSADWYEHFPAHMKLDLMDFAYSYITRSGRIDDARLRA 360 AA A YE+ R+PIV+KLV AA+TSA WY FPAHM+L +D AYSYITRSGRIDD RL A Sbjct: 303 AAFAEYEATRRPIVEKLVRAAKTSAAWYADFPAHMQLAPLDMAYSYITRSGRIDDQRLTA 362 Query: 361 MSPAFMARYAAAK 373 MSP FMA Y AA+ Sbjct: 363 MSPRFMAEYGAAR 375 >ref|ZP_05099691.1| benzoate-CoA ligase family [Roseobacter sp. GAI101] gb|EEB83993.1| benzoate-CoA ligase family [Roseobacter sp. GAI101] Length = 898 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/373 (53%), Positives = 268/373 (71%), Gaps = 1/373 (0%) Query: 3 IAVIGGGPGGLYFAYLWKKRHPDAEIDLFEQNAAGATWGFGVVFSEQALDFLRADDPETV 62 +A++GGGP GLY A L +++ P + LFEQN GAT+GFGVVFS+QAL FL++ DPE Sbjct: 1 MAILGGGPAGLYTAILLRRKMPHVRVKLFEQNPQGATFGFGVVFSDQALAFLKSADPEIH 60 Query: 63 DAIAPLMESWKNITLNLRGESVEIDGVGFSSIGRLALLTILQERVRSTGVTPRFDTVVQS 122 D + P ME W+N+TL+L + V +DGVGFS++GRL L+ IL++ + GV FD ++ S Sbjct: 61 DLLTPHMEQWQNMTLHLPTDQVVLDGVGFSAVGRLELIEILRKHALALGVEMSFDHLITS 120 Query: 123 VDQLAGYDLIVAADGLNSMVRRGYESAFGASVSQSSNKFAWYGTTKTFATLSQTFVATER 182 +D++ DLIV ADGLNS+VRR +E+ F + +N FAW+GT + F TL+Q+F+ T+ Sbjct: 121 LDEIDA-DLIVGADGLNSLVRRTFEADFAPQIDHFTNHFAWFGTDRPFDTLTQSFIETDL 179 Query: 183 GSFNAHHYRYAKDMSTFLVECDAATWAAYGFADKSIEESQAICEEVFAATLDGHRLISNK 242 G NAHHYR+A D STF++EC+A T+ YGFAD + + S A+C+ +FA L G +LI+NK Sbjct: 180 GPLNAHHYRFAPDRSTFIIECEAETFQNYGFADMTEDASAALCQSLFADVLGGTKLITNK 239 Query: 243 SVWRNFPWIWNERWSHGNMVLIGDALHSAHFSIGSGTRLAIEDAIALTKALETESGIAAA 302 S+WR FP +W E W G V+IGDA H+AHFSIGSGTRLA+ED IAL AL T++ I AA Sbjct: 240 SLWRQFPRLWCENWVSGRHVIIGDAAHTAHFSIGSGTRLALEDCIALVNALATDADIDAA 299 Query: 303 LARYESERKPIVKKLVTAARTSADWYEHFPAHMKLDLMDFAYSYITRSGRIDDARLRAMS 362 LA ++++R P+ KK+V AA TSA WY++F M L +DFA+ YITRSGR+D RLR M+ Sbjct: 300 LATFQADRLPVAKKMVQAANTSALWYDNFGDKMALAPLDFAFDYITRSGRVDMDRLRKMA 359 Query: 363 PAFMARYAAAKGQ 375 PAF ARY Q Sbjct: 360 PAFAARYEGRPAQ 372