BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0129.0045.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767743.1| hypothetical protein blr1103 [Bradyrhizobium ja...   197   4e-49
ref|YP_001236936.1| hypothetical protein BBta_0766 [Bradyrhizobi...   197   5e-49
ref|YP_001208585.1| hypothetical protein BRADO6772 [Bradyrhizobi...   194   3e-48
ref|YP_534752.1| hypothetical protein RPC_4911 [Rhodopseudomonas...   180   8e-44
ref|YP_783778.1| hypothetical protein RPE_4879 [Rhodopseudomonas...   174   3e-42

>ref|NP_767743.1| hypothetical protein blr1103 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46368.1| blr1103 [Bradyrhizobium japonicum USDA 110]
          Length = 259

 Score =  197 bits (501), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 89/117 (76%), Positives = 103/117 (88%)

Query: 1   MRAVDPDDFRTAINEGVVALRDAGTDVVLVNLQYSPRTETMISAPPYLDNMKVVAQQHDV 60
           +RA+DPDDFR A+  GV AL++AG DVVL+NLQYSPRTETMIS PPYLDNM+VVAQ+HD+
Sbjct: 142 IRAIDPDDFRGAVTGGVSALQNAGADVVLMNLQYSPRTETMISVPPYLDNMRVVAQEHDI 201

Query: 61  PLFDRFAIMKQWSDAGYFDLFSTSHGVDLAKKVHACLGRALAKFVIDAAHLGPVQQN 117
           PLFDRFAIM+QW+D G FDLFS S G +LAK+VH CLGRALA+FVIDAAHLGP QQ 
Sbjct: 202 PLFDRFAIMRQWNDQGQFDLFSPSRGPELAKQVHDCLGRALAQFVIDAAHLGPAQQQ 258


>ref|YP_001236936.1| hypothetical protein BBta_0766 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33030.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 252

 Score =  197 bits (500), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 106/117 (90%)

Query: 1   MRAVDPDDFRTAINEGVVALRDAGTDVVLVNLQYSPRTETMISAPPYLDNMKVVAQQHDV 60
           MR++DPD+FR A+N+GV  L++AG DV+L+NLQYSPRTET+IS PPY+DNM+VVAQQ D+
Sbjct: 136 MRSIDPDEFRQAVNDGVATLQNAGADVILMNLQYSPRTETLISVPPYIDNMRVVAQQRDI 195

Query: 61  PLFDRFAIMKQWSDAGYFDLFSTSHGVDLAKKVHACLGRALAKFVIDAAHLGPVQQN 117
           PLFDRFAIM+QW++ G FDLF+ +HG++LAK+VH CLGRAL+KF+IDAAHLGP QQN
Sbjct: 196 PLFDRFAIMRQWNEQGDFDLFNPTHGIELAKQVHDCLGRALSKFIIDAAHLGPAQQN 252


>ref|YP_001208585.1| hypothetical protein BRADO6772 [Bradyrhizobium sp. ORS 278]
 emb|CAL80370.1| conserved hypothetical protein; putative secreted protein
           [Bradyrhizobium sp. ORS 278]
          Length = 252

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 82/117 (70%), Positives = 105/117 (89%)

Query: 1   MRAVDPDDFRTAINEGVVALRDAGTDVVLVNLQYSPRTETMISAPPYLDNMKVVAQQHDV 60
           MR++DPD+FR A+N+GV  L++AG DV+L+NLQYSPRTET+IS PPY+DNM+VVAQQ D+
Sbjct: 136 MRSIDPDEFRQAVNDGVATLQNAGADVILMNLQYSPRTETLISVPPYIDNMRVVAQQRDI 195

Query: 61  PLFDRFAIMKQWSDAGYFDLFSTSHGVDLAKKVHACLGRALAKFVIDAAHLGPVQQN 117
           PLFDRFAIM+QW++ G FDLF+ +HG++LAK+VH CLGRAL+KF+IDAAHL P QQN
Sbjct: 196 PLFDRFAIMRQWNEQGDFDLFNPTHGIELAKQVHDCLGRALSKFIIDAAHLSPAQQN 252


>ref|YP_534752.1| hypothetical protein RPC_4911 [Rhodopseudomonas palustris BisB18]
 gb|ABD90433.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 254

 Score =  180 bits (456), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 78/114 (68%), Positives = 100/114 (87%)

Query: 2   RAVDPDDFRTAINEGVVALRDAGTDVVLVNLQYSPRTETMISAPPYLDNMKVVAQQHDVP 61
           R+VDP++FR A++EGV A++ AG DV+L+NLQYSPRTETMIS+ PYLDNM+VVAQ+H++P
Sbjct: 136 RSVDPEEFREAVDEGVEAMQKAGADVILMNLQYSPRTETMISSAPYLDNMRVVAQKHEIP 195

Query: 62  LFDRFAIMKQWSDAGYFDLFSTSHGVDLAKKVHACLGRALAKFVIDAAHLGPVQ 115
           LFDRFAIM++WS+ G FDLFS S G+DLAK+VH C+GRALA  VIDAA + PV+
Sbjct: 196 LFDRFAIMREWSEKGEFDLFSPSPGIDLAKRVHDCVGRALADLVIDAARINPVE 249


>ref|YP_783778.1| hypothetical protein RPE_4879 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08798.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 254

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 78/114 (68%), Positives = 94/114 (82%)

Query: 2   RAVDPDDFRTAINEGVVALRDAGTDVVLVNLQYSPRTETMISAPPYLDNMKVVAQQHDVP 61
           R+ DPD+FR A+ EGV  +  AG DV+L+NLQYSPRTETMIS  PYLDNM+VVAQ+H VP
Sbjct: 136 RSADPDEFREAVGEGVSQMHKAGADVILINLQYSPRTETMISPSPYLDNMRVVAQEHGVP 195

Query: 62  LFDRFAIMKQWSDAGYFDLFSTSHGVDLAKKVHACLGRALAKFVIDAAHLGPVQ 115
           LFDRFAIM+QW++ G FD FS S G+DLAK+VH C+GRALA FVIDAA + PV+
Sbjct: 196 LFDRFAIMRQWNENGDFDFFSPSPGLDLAKRVHECIGRALATFVIDAARVNPVE 249