BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0129.0042.p         (174 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767741.1| ApaG protein [Bradyrhizobium japonicum USDA 110...   228   2e-58
sp|Q89VE6.2|APAG_BRAJA RecName: Full=Protein ApaG                     227   6e-58
ref|YP_568037.1| ApaG protein [Rhodopseudomonas palustris BisB5]...   224   5e-57
ref|YP_004111232.1| ApaG domain-containing protein [Rhodopseudom...   222   2e-56
ref|YP_534754.1| ApaG protein [Rhodopseudomonas palustris BisB18...   221   4e-56

>ref|NP_767741.1| ApaG protein [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46366.1| ApaG protein [Bradyrhizobium japonicum USDA 110]
          Length = 134

 Score =  228 bits (582), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 111/135 (82%), Positives = 121/135 (89%), Gaps = 2/135 (1%)

Query: 40  LSRMYRAVTRQIEVTVEPNFMPERSSVDRREYFWSYRIVIVNSGPETVQLRTRHWIITDA 99
           ++ MYRAVTRQIEVTVEPNF+PE+SS DR  YFWSY IVI NSG ETVQL+TRHWIITDA
Sbjct: 2   MAAMYRAVTRQIEVTVEPNFVPEQSSADRSRYFWSYTIVITNSGEETVQLKTRHWIITDA 61

Query: 100 TGRRQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMTGSYQMVTEAGERFDIDVPT 159
           TGR+QEV+GEGVVGEQP LAPGERFEYTSGVPL TASGFMTG YQMV+E+GERF+IDVPT
Sbjct: 62  TGRQQEVKGEGVVGEQPTLAPGERFEYTSGVPLSTASGFMTGRYQMVSESGERFEIDVPT 121

Query: 160 FSLDSPSPGGKRVLN 174
           FSLDSP    KRVLN
Sbjct: 122 FSLDSPD--NKRVLN 134


>sp|Q89VE6.2|APAG_BRAJA RecName: Full=Protein ApaG
          Length = 130

 Score =  227 bits (578), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 111/132 (84%), Positives = 119/132 (90%), Gaps = 2/132 (1%)

Query: 43  MYRAVTRQIEVTVEPNFMPERSSVDRREYFWSYRIVIVNSGPETVQLRTRHWIITDATGR 102
           MYRAVTRQIEVTVEPNF+PE+SS DR  YFWSY IVI NSG ETVQL+TRHWIITDATGR
Sbjct: 1   MYRAVTRQIEVTVEPNFVPEQSSADRSRYFWSYTIVITNSGEETVQLKTRHWIITDATGR 60

Query: 103 RQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMTGSYQMVTEAGERFDIDVPTFSL 162
           +QEV+GEGVVGEQP LAPGERFEYTSGVPL TASGFMTG YQMV+E+GERF+IDVPTFSL
Sbjct: 61  QQEVKGEGVVGEQPTLAPGERFEYTSGVPLSTASGFMTGRYQMVSESGERFEIDVPTFSL 120

Query: 163 DSPSPGGKRVLN 174
           DSP    KRVLN
Sbjct: 121 DSPD--NKRVLN 130


>ref|YP_568037.1| ApaG protein [Rhodopseudomonas palustris BisB5]
 gb|ABE38136.1| ApaG [Rhodopseudomonas palustris BisB5]
          Length = 140

 Score =  224 bits (570), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 107/136 (78%), Positives = 120/136 (88%), Gaps = 2/136 (1%)

Query: 39  GLSRMYRAVTRQIEVTVEPNFMPERSSVDRREYFWSYRIVIVNSGPETVQLRTRHWIITD 98
           G + MYRAVTRQIEVTVEPN++PERSS + R++FWSY +VI NSG ETVQLRTRHW+ITD
Sbjct: 7   GTTLMYRAVTRQIEVTVEPNYLPERSSAENRQFFWSYTVVITNSGDETVQLRTRHWVITD 66

Query: 99  ATGRRQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMTGSYQMVTEAGERFDIDVP 158
           A+GR QEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFM G YQM +E+GE+F+IDVP
Sbjct: 67  ASGRTQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMAGRYQMESESGEKFEIDVP 126

Query: 159 TFSLDSPSPGGKRVLN 174
            FSLDSP   GKR LN
Sbjct: 127 AFSLDSPE--GKRTLN 140


>ref|YP_004111232.1| ApaG domain-containing protein [Rhodopseudomonas palustris DX-1]
 gb|ADU46499.1| ApaG domain protein [Rhodopseudomonas palustris DX-1]
          Length = 130

 Score =  222 bits (565), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 108/132 (81%), Positives = 118/132 (89%), Gaps = 2/132 (1%)

Query: 43  MYRAVTRQIEVTVEPNFMPERSSVDRREYFWSYRIVIVNSGPETVQLRTRHWIITDATGR 102
           MYRAVTR+IEVTVEPN++PERSS + R+YFWSY +VI NSG ETVQLRTRHW+ITDA+GR
Sbjct: 1   MYRAVTRRIEVTVEPNYLPERSSAENRQYFWSYTVVITNSGEETVQLRTRHWVITDASGR 60

Query: 103 RQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMTGSYQMVTEAGERFDIDVPTFSL 162
            QEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFM G YQM TEAGE+F+IDVP FSL
Sbjct: 61  TQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMAGRYQMETEAGEKFEIDVPPFSL 120

Query: 163 DSPSPGGKRVLN 174
           DSP   GKR LN
Sbjct: 121 DSPE--GKRTLN 130


>ref|YP_534754.1| ApaG protein [Rhodopseudomonas palustris BisB18]
 gb|ABD90435.1| ApaG [Rhodopseudomonas palustris BisB18]
          Length = 140

 Score =  221 bits (562), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/134 (79%), Positives = 119/134 (88%), Gaps = 2/134 (1%)

Query: 41  SRMYRAVTRQIEVTVEPNFMPERSSVDRREYFWSYRIVIVNSGPETVQLRTRHWIITDAT 100
           +RMYRAVTR+IEVTVEPNF+PERSS + R++FWSY IVI+NSG ETVQLRTRHWIITDA+
Sbjct: 9   TRMYRAVTRRIEVTVEPNFLPERSSAENRQFFWSYTIVIINSGDETVQLRTRHWIITDAS 68

Query: 101 GRRQEVRGEGVVGEQPVLAPGERFEYTSGVPLPTASGFMTGSYQMVTEAGERFDIDVPTF 160
           GR+QEVRGEGVVGEQPVL PG+RFEYTSGVPLPTASGFM G YQMVT +GE F+IDVP F
Sbjct: 69  GRKQEVRGEGVVGEQPVLEPGQRFEYTSGVPLPTASGFMAGRYQMVTASGEPFEIDVPAF 128

Query: 161 SLDSPSPGGKRVLN 174
           SLDSP    KR LN
Sbjct: 129 SLDSPE--AKRTLN 140