BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0129.0037.p         (174 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_534758.1| GcrA cell cycle regulator [Rhodopseudomonas pal...   309   1e-82
ref|NP_767737.1| hypothetical protein bll1097 [Bradyrhizobium ja...   306   6e-82
ref|ZP_08628186.1| cell cycle regulator GcrA [Bradyrhizobiaceae ...   305   1e-81
ref|YP_575989.1| GcrA cell cycle regulator [Nitrobacter hamburge...   305   2e-81
ref|ZP_01044639.1| GcrA cell cycle regulator [Nitrobacter sp. Nb...   304   4e-81

>ref|YP_534758.1| GcrA cell cycle regulator [Rhodopseudomonas palustris BisB18]
 gb|ABD90439.1| Global cell cycle regulator GcrA [Rhodopseudomonas palustris
           BisB18]
          Length = 169

 Score =  309 bits (792), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 147/171 (85%), Positives = 157/171 (91%), Gaps = 4/171 (2%)

Query: 1   MTVLTWSDDRVEQLKKLWESGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKAPSKPPS 60
           MTVLTW+DDRVEQLKKLWE GLSASQIAAELGNVTRNAVIGKVHRLGLSGRAK+P+    
Sbjct: 1   MTVLTWTDDRVEQLKKLWEGGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPT---- 56

Query: 61  TAAPRQGKARPAQHMMRVARPVSRGNTALAHAFEVEMEPDPISYDNVVPMSQRLSLLELN 120
           +AAPR  KARPAQHMMRV RPVSRGNTALAH FEVE EPDP+++DNVVPMSQRLSLLELN
Sbjct: 57  SAAPRPRKARPAQHMMRVTRPVSRGNTALAHVFEVEAEPDPVTHDNVVPMSQRLSLLELN 116

Query: 121 EATCHWPVGDPSSPEFFFCGGKALAGLPYCAHHSRVAYQPAADRRRPSAKP 171
           EATCHWP+GDPS+PEFFFCGGKAL GLPYCAHHSR+AYQPA DRRR  AKP
Sbjct: 117 EATCHWPIGDPSNPEFFFCGGKALGGLPYCAHHSRIAYQPAGDRRRQQAKP 167


>ref|NP_767737.1| hypothetical protein bll1097 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46362.1| bll1097 [Bradyrhizobium japonicum USDA 110]
          Length = 169

 Score =  306 bits (785), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 147/171 (85%), Positives = 160/171 (93%), Gaps = 4/171 (2%)

Query: 1   MTVLTWSDDRVEQLKKLWESGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKAPSKPPS 60
           MTVLTWSDDRVEQLKKLWE+GLSASQIAAELGNVTRNAVIGKVHRLGLSGRAK+PS    
Sbjct: 1   MTVLTWSDDRVEQLKKLWEAGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPS---- 56

Query: 61  TAAPRQGKARPAQHMMRVARPVSRGNTALAHAFEVEMEPDPISYDNVVPMSQRLSLLELN 120
           +AAPR  KARPAQHMMRV+RP++RGNTALA AFEVE+E +P++YDNVVPMSQRLSLLELN
Sbjct: 57  SAAPRPRKARPAQHMMRVSRPIARGNTALAQAFEVEVEAEPVTYDNVVPMSQRLSLLELN 116

Query: 121 EATCHWPVGDPSSPEFFFCGGKALAGLPYCAHHSRVAYQPAADRRRPSAKP 171
           EATCHWPVGDPSSP+FFFCGG+AL+GLPYCA HSRVAYQPAADRRR  AKP
Sbjct: 117 EATCHWPVGDPSSPDFFFCGGRALSGLPYCAQHSRVAYQPAADRRRAPAKP 167


>ref|ZP_08628186.1| cell cycle regulator GcrA [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09095.1| cell cycle regulator GcrA [Bradyrhizobiaceae bacterium SG-6C]
          Length = 168

 Score =  305 bits (782), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/168 (85%), Positives = 158/168 (94%), Gaps = 4/168 (2%)

Query: 1   MTVLTWSDDRVEQLKKLWESGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKAPSKPPS 60
           MTV++W+DDRVEQLKKLWE+GLSASQIAAELGN+TRNAVIGKVHRLGLSGRAK+PS    
Sbjct: 1   MTVISWTDDRVEQLKKLWEAGLSASQIAAELGNITRNAVIGKVHRLGLSGRAKSPS---- 56

Query: 61  TAAPRQGKARPAQHMMRVARPVSRGNTALAHAFEVEMEPDPISYDNVVPMSQRLSLLELN 120
           +AAPRQ KARPAQHMMR++RPVSRGNTALAHAFEVE EPDP++YDNVVPMSQRL+LLELN
Sbjct: 57  SAAPRQRKARPAQHMMRISRPVSRGNTALAHAFEVEAEPDPVAYDNVVPMSQRLTLLELN 116

Query: 121 EATCHWPVGDPSSPEFFFCGGKALAGLPYCAHHSRVAYQPAADRRRPS 168
           E+TCHWPVGDP S +FFFCGGKAL GLPYCAHHSRVAYQPA+DRRR S
Sbjct: 117 ESTCHWPVGDPGSADFFFCGGKALGGLPYCAHHSRVAYQPASDRRRGS 164


>ref|YP_575989.1| GcrA cell cycle regulator [Nitrobacter hamburgensis X14]
 gb|ABE61529.1| Global cell cycle regulator GcrA [Nitrobacter hamburgensis X14]
          Length = 168

 Score =  305 bits (780), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/166 (87%), Positives = 156/166 (93%), Gaps = 4/166 (2%)

Query: 1   MTVLTWSDDRVEQLKKLWESGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKAPSKPPS 60
           MTV+TW+DDRVEQLKKLWE+GLSASQIAAELGNVTRNAVIGKVHRLGLSGRAK+PS    
Sbjct: 1   MTVITWTDDRVEQLKKLWEAGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPS---- 56

Query: 61  TAAPRQGKARPAQHMMRVARPVSRGNTALAHAFEVEMEPDPISYDNVVPMSQRLSLLELN 120
           +  PR  KARPAQH+MRV+RPVSRGNTALAH FEVE+EPDPI++DNVVPMSQRLSLLELN
Sbjct: 57  STVPRPRKARPAQHVMRVSRPVSRGNTALAHDFEVELEPDPIAFDNVVPMSQRLSLLELN 116

Query: 121 EATCHWPVGDPSSPEFFFCGGKALAGLPYCAHHSRVAYQPAADRRR 166
           EATCHWPVGDPSSPEFFFCGGKAL GLPYCAHHSR+AYQPAADRRR
Sbjct: 117 EATCHWPVGDPSSPEFFFCGGKALNGLPYCAHHSRIAYQPAADRRR 162


>ref|ZP_01044639.1| GcrA cell cycle regulator [Nitrobacter sp. Nb-311A]
 gb|EAQ37420.1| GcrA cell cycle regulator [Nitrobacter sp. Nb-311A]
          Length = 168

 Score =  304 bits (778), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 145/170 (85%), Positives = 156/170 (91%), Gaps = 4/170 (2%)

Query: 1   MTVLTWSDDRVEQLKKLWESGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKAPSKPPS 60
           MTV+ W+DDRVEQLKKLWE+GLSASQIAAELGNVTRNAVIGKVHRLGLSGRAK+PS    
Sbjct: 1   MTVINWTDDRVEQLKKLWEAGLSASQIAAELGNVTRNAVIGKVHRLGLSGRAKSPS---- 56

Query: 61  TAAPRQGKARPAQHMMRVARPVSRGNTALAHAFEVEMEPDPISYDNVVPMSQRLSLLELN 120
           +  PR  KARPAQHMMRV+RPVSRGNTALA AFEVE+EP+PI+YDNVVPMSQRLSLLEL+
Sbjct: 57  STVPRPRKARPAQHMMRVSRPVSRGNTALAQAFEVELEPNPIAYDNVVPMSQRLSLLELS 116

Query: 121 EATCHWPVGDPSSPEFFFCGGKALAGLPYCAHHSRVAYQPAADRRRPSAK 170
           EATCHWPVGDPSSPEFFFCGGKAL GLPYCAHHSR+AYQPA DRRR S K
Sbjct: 117 EATCHWPVGDPSSPEFFFCGGKALTGLPYCAHHSRIAYQPATDRRRQSPK 166