BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0029.p (442 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767730.1| phosphate regulon, two-component sensor histidi... 676 0.0 ref|YP_575982.1| histidine kinase [Nitrobacter hamburgensis X14]... 649 0.0 ref|YP_001236927.1| two component sensor histidine kinase [Brady... 643 0.0 ref|ZP_08628185.1| phosphate regulon sensor protein PhoR [Bradyr... 642 0.0 ref|YP_568026.1| ATPase-like ATP-binding protein [Rhodopseudomon... 641 0.0 >ref|NP_767730.1| phosphate regulon, two-component sensor histidine kinase [Bradyrhizobium japonicum USDA 110] dbj|BAC46355.1| phosphate regulon, two-component sensor histidine kinase [Bradyrhizobium japonicum USDA 110] Length = 432 Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/433 (83%), Positives = 393/433 (90%), Gaps = 3/433 (0%) Query: 6 MAIDDSSSSIFSPWPDRLRHSALILLAAALALSVVVALGELSLVRASAVFVCIAAAALVP 65 MAID SS PW DRLRHS +IL+AAALALSVVV+LGELS++ A AVF+CIAAAAL+P Sbjct: 1 MAIDAPSSPTAQPWSDRLRHSTIILIAAALALSVVVSLGELSVLHAVAVFLCIAAAALIP 60 Query: 66 WRLHDAGTSREDVRGVNPVEAAAVSAVVAGMPDPAVLLDRAGRVIHLNTAAAQLAPALRK 125 WRLHD SR+DVR +NPVE+AAV+AVVAGMPDPAVLLDRAGRVIHLN AAAQLAPALR+ Sbjct: 61 WRLHDTAASRDDVRRINPVESAAVAAVVAGMPDPAVLLDRAGRVIHLNAAAAQLAPALRR 120 Query: 126 NELAQFALRSPEIITALREAIATTEPRRATYTDHVPVDRWMELVITPVPVPTQFGGTEKC 185 NELAQFALRSPEIITALRE+IATTEPRRATY DHVPVDRWMEL+ITPVPVPT FGG +KC Sbjct: 121 NELAQFALRSPEIITALRESIATTEPRRATYLDHVPVDRWMELIITPVPVPTTFGGADKC 180 Query: 186 MLMTFHDLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAREDARARERFLGI 245 MLMTFHD TPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQG A++D +ARERFLGI Sbjct: 181 MLMTFHDQTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGQAKDDPKARERFLGI 240 Query: 246 MHTQATRMARLIDDLLSLSRVELSAHVRPEASIDVVPIIRQVADGLEALASERQVEIEVD 305 MH QATRMARLIDDLLSLSRVELSAHVRP+ +D++PIIRQVADGLE LA ERQVE+E+ Sbjct: 241 MHNQATRMARLIDDLLSLSRVELSAHVRPDTLVDLLPIIRQVADGLEPLARERQVEVEIH 300 Query: 306 LPQAPVMIAGDREELLRLFENLIENALKYGASGGRVIVSLNQAVSGASGEGAPEIRVMVR 365 LP+ PVMIAGDREELLRLFENLIENALKYGASGGRVIVSL SGA+ +G EIRVMVR Sbjct: 301 LPEPPVMIAGDREELLRLFENLIENALKYGASGGRVIVSLT---SGAATDGTQEIRVMVR 357 Query: 366 DFGPGIAPEHLPRLTERFYRVDVGDSRNQGGTGLGLSLVKHILNRHRGRLLIESVPKNGA 425 DFGPGIAPEHLPRLTERFYRVDVGDSR QGGTGLGLSLVKHILNRHRGRLLIESVPK GA Sbjct: 358 DFGPGIAPEHLPRLTERFYRVDVGDSRLQGGTGLGLSLVKHILNRHRGRLLIESVPKQGA 417 Query: 426 AFTACFPRPKTPL 438 FTACFP+ + P+ Sbjct: 418 TFTACFPQIRPPV 430 >ref|YP_575982.1| histidine kinase [Nitrobacter hamburgensis X14] gb|ABE61522.1| histidine kinase [Nitrobacter hamburgensis X14] Length = 450 Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/421 (77%), Positives = 357/421 (84%), Gaps = 3/421 (0%) Query: 12 SSSIFSPWPDRLRHSALILLAAALALSVVVALGELSLVRASAVFVCIAAAALVPWRLHDA 71 S+S F+ W DRLR +ALILL A L L+ +V G L RA FVCI AALVPW++HD Sbjct: 23 SASRFASWTDRLRRAALILLVAGLVLAALVVFGGLQPPRAIVAFVCIVGAALVPWQVHDP 82 Query: 72 GTSREDVRGVNPVEAAAVSAVVAGMPDPAVLLDRAGRVIHLNTAAAQLAPALRKNELAQF 131 SRE G NPV+ AAV A+VAGMPDP VLLDRAGRVIHLN AAAQL PALR+NELAQF Sbjct: 83 AASREADLGANPVDTAAVHAIVAGMPDPNVLLDRAGRVIHLNAAAAQLVPALRQNELAQF 142 Query: 132 ALRSPEIITALREAIATTEPRRATYTDHVPVDRWMELVITPVPVPTQFGGTEKCMLMTFH 191 ALRSPEI+TALREA+AT E RR TY +H PVDRWMEL++TPVPVPT FGG + CML+TFH Sbjct: 143 ALRSPEIVTALREAVATRETRRTTYLNHAPVDRWMELIVTPVPVPTAFGGVDHCMLLTFH 202 Query: 192 DLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAREDARARERFLGIMHTQAT 251 D TPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAR+DA AR+RFLGIMH QAT Sbjct: 203 DQTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPARDDAGARDRFLGIMHAQAT 262 Query: 252 RMARLIDDLLSLSRVELSAHVRPEASIDVVPIIRQVADGLEALASERQVEIEVDLPQAPV 311 RMARLIDDLLSLSRVELSAHVRP+A +D++PI+RQV DGLE LA+ERQV IEV+LPQ PV Sbjct: 263 RMARLIDDLLSLSRVELSAHVRPDALVDLIPIVRQVVDGLEPLAAERQVRIEVELPQTPV 322 Query: 312 MIAGDREELLRLFENLIENALKYGASGGRVIVSLNQAVSGASGEGAPEIRVMVRDFGPGI 371 MI GDREELLRLFENLIENALKYGASG RV+VS ++ S +GAPE RV VRDFG GI Sbjct: 323 MICGDREELLRLFENLIENALKYGASGSRVVVS---SMMDVSLDGAPEFRVAVRDFGRGI 379 Query: 372 APEHLPRLTERFYRVDVGDSRNQGGTGLGLSLVKHILNRHRGRLLIESVPKNGAAFTACF 431 APEHLPRLTERFYR+D GDSR QGGTGLGLSLVKHILNRHRGRLLIESVP +GA FTA F Sbjct: 380 APEHLPRLTERFYRIDAGDSRAQGGTGLGLSLVKHILNRHRGRLLIESVPGHGATFTAGF 439 Query: 432 P 432 P Sbjct: 440 P 440 >ref|YP_001236927.1| two component sensor histidine kinase [Bradyrhizobium sp. BTAi1] gb|ABQ33021.1| two component sensor histidine kinase [Bradyrhizobium sp. BTAi1] Length = 435 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/433 (83%), Positives = 385/433 (88%), Gaps = 6/433 (1%) Query: 6 MAID---DSSSSIFSPWPDRLRHSALILLAAALALSVVVALGELSLVRASAVFVCIAAAA 62 MA+D D+ + F+PWPDRLRHSA+ILLAAALAL+ +V L EL RA AVF+CIA AA Sbjct: 1 MALDSPSDAPPTFFAPWPDRLRHSAIILLAAALALTGLVLLDELLPFRALAVFLCIAGAA 60 Query: 63 LVPWRLHDAGTSREDVRGVNPVEAAAVSAVVAGMPDPAVLLDRAGRVIHLNTAAAQLAPA 122 LVPWRLH A RE+ R NPVEAAAVSAVVAG+P PAVLLDRAGRVIHLN AAAQLAPA Sbjct: 61 LVPWRLHSAVAKREEERHANPVEAAAVSAVVAGIPVPAVLLDRAGRVIHLNAAAAQLAPA 120 Query: 123 LRKNELAQFALRSPEIITALREAIATTEPRRATYTDHVPVDRWMELVITPVPVPTQFGGT 182 LRK ELAQFALR+PEIITALREAIA+TE RRATY DHVPVDRW EL+ITPVPVPT FGGT Sbjct: 121 LRKGELAQFALRTPEIITALREAIASTELRRATYHDHVPVDRWTELIITPVPVPTAFGGT 180 Query: 183 EKCMLMTFHDLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAREDARARERF 242 +KCMLMTFHDLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPA++DA+ARERF Sbjct: 181 DKCMLMTFHDLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAKDDAKARERF 240 Query: 243 LGIMHTQATRMARLIDDLLSLSRVELSAHVRPEASIDVVPIIRQVADGLEALASERQVEI 302 LGIMHTQATRMARLIDDLLSLSRVELSAHV+P +D+V IIRQV DGLE LA ERQVEI Sbjct: 241 LGIMHTQATRMARLIDDLLSLSRVELSAHVQPHTMVDMVAIIRQVTDGLEPLARERQVEI 300 Query: 303 EVDLPQAPVMIAGDREELLRLFENLIENALKYGASGGRVIVSLNQAVSGASGEGAPEIRV 362 E LP APV IAGDREELLR+FENLIENALKYGASGGRVIVSL QAV SGEG PEIRV Sbjct: 301 ETSLPDAPVTIAGDREELLRVFENLIENALKYGASGGRVIVSLEQAV---SGEGTPEIRV 357 Query: 363 MVRDFGPGIAPEHLPRLTERFYRVDVGDSRNQGGTGLGLSLVKHILNRHRGRLLIESVPK 422 VRDFGPGIAPEHLPRLTERFYRVDVGDSR QGGTGLGLSLVKHILNRHRGRLLIESVP+ Sbjct: 358 KVRDFGPGIAPEHLPRLTERFYRVDVGDSRAQGGTGLGLSLVKHILNRHRGRLLIESVPR 417 Query: 423 NGAAFTACFPRPK 435 GAAFTACFP+ K Sbjct: 418 KGAAFTACFPQSK 430 >ref|ZP_08628185.1| phosphate regulon sensor protein PhoR [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09094.1| phosphate regulon sensor protein PhoR [Bradyrhizobiaceae bacterium SG-6C] Length = 438 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/427 (75%), Positives = 356/427 (83%), Gaps = 5/427 (1%) Query: 11 SSSSIFSPWPDRLRHSALILLAAALALSVVVALGELSLVRASAVFVCIAAAALVPWRLHD 70 SS+S F+PW DRLR SA+IL+A AL L+ V G L+L +A +FV I AALVPW LH Sbjct: 5 SSNSGFAPWTDRLRRSAIILIATALGLTASVVFGGLTLSQAGLIFVVIGGAALVPWHLHQ 64 Query: 71 AGTSREDVRGVNPVEAAAVSAVVAGMPDPAVLLDRAGRVIHLNTAAAQLAPALRKNELAQ 130 + + ED+ G P E V A+V GMPD AVLLDRAGRV+H NTAA+QLAPALRKNELA Sbjct: 65 SVPASEDMIGARPAETPVVQALVGGMPDAAVLLDRAGRVLHFNTAASQLAPALRKNELAL 124 Query: 131 FALRSPEIITALREAIATTEPRRATYTDHVPVDRWMELVITPVPVPTQFGGTEKCMLMTF 190 FALRSPEII ALREAIA+ +P+RA+Y DHVP+DRWMEL++TPV +PT FGG+E C+LMTF Sbjct: 125 FALRSPEIIAALREAIASRQPQRASYVDHVPIDRWMELIVTPVSLPTAFGGSEYCILMTF 184 Query: 191 HDLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAREDARARERFLGIMHTQA 250 HD T LRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAR+D +ARERFLGIMH QA Sbjct: 185 HDQTALRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPARDDPKARERFLGIMHAQA 244 Query: 251 TRMARLIDDLLSLSRVELSAHVRPEASIDVVPIIRQVADGLEALASERQVEIEVDLPQAP 310 TRMARLIDDLLSLSRVELSAHVRPE +DVVP+IRQV DGLE LASERQV IE+ LP +P Sbjct: 245 TRMARLIDDLLSLSRVELSAHVRPEKLVDVVPLIRQVVDGLEPLASERQVAIELQLPSSP 304 Query: 311 VMIAGDREELLRLFENLIENALKYGASGGRVIVSLNQA-VSGASGEGAPEIRVMVRDFGP 369 V+IAGD EELLRLFENLIEN LKYGASGGRV+VSL + ASG E+RV VRDFGP Sbjct: 305 VIIAGDTEELLRLFENLIENGLKYGASGGRVVVSLTEPDADDASG----EMRVAVRDFGP 360 Query: 370 GIAPEHLPRLTERFYRVDVGDSRNQGGTGLGLSLVKHILNRHRGRLLIESVPKNGAAFTA 429 GI PEHLPRLTERFYRVDVGDSR QGGTGLGLSLVKHILNRHRGRL IESVP GA FTA Sbjct: 361 GIPPEHLPRLTERFYRVDVGDSRAQGGTGLGLSLVKHILNRHRGRLQIESVPGQGATFTA 420 Query: 430 CFPRPKT 436 CFP KT Sbjct: 421 CFPAIKT 427 >ref|YP_568026.1| ATPase-like ATP-binding protein [Rhodopseudomonas palustris BisB5] gb|ABE38125.1| histidine kinase [Rhodopseudomonas palustris BisB5] Length = 451 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/431 (76%), Positives = 370/431 (85%), Gaps = 4/431 (0%) Query: 7 AIDDSSSSIFSPWPDRLRHSALILLAAALALSVVVALGELSLVRASAVFVCIAAAALVPW 66 + D++ + I SPW DRLRH+A+ILLAAA+AL + A GE+S A AVFVCIAAA+LVPW Sbjct: 19 STDNTPAPIASPWADRLRHAAIILLAAAIALVALAAFGEISGAAAGAVFVCIAAASLVPW 78 Query: 67 RLHDAGTSREDVRGVNPVEAAAVSAVVAGMPDPAVLLDRAGRVIHLNTAAAQLAPALRKN 126 RLH ++RE+ GV+PVE V A+VAGMPDPAVLLDRAGRV+HLN AA Q+APALR Sbjct: 79 RLHSTVSAREETHGVSPVETPVVRAIVAGMPDPAVLLDRAGRVLHLNDAAEQIAPALRVR 138 Query: 127 ELAQFALRSPEIITALREAIATTEPRRATYTDHVPVDRWMELVITPVPVPTQFGGTEKCM 186 ELAQFALR+PEI+TALREAIAT EPRR +Y DH P++RWMEL+ITPV VPT F GT++CM Sbjct: 139 ELAQFALRNPEIVTALREAIATAEPRRVSYLDHAPIERWMELIITPVQVPTAFDGTDQCM 198 Query: 187 LMTFHDLTPLRRVEEMRADFVANASHELRTPLAALSGFIDTLQGPAREDARARERFLGIM 246 LMTFHDLTPLRRVEEMR DFVANASHELRTPLAALSGFIDTLQGPAR+DA+ARERFLGIM Sbjct: 199 LMTFHDLTPLRRVEEMRVDFVANASHELRTPLAALSGFIDTLQGPARDDAKARERFLGIM 258 Query: 247 HTQATRMARLIDDLLSLSRVELSAHVRPEASIDVVPIIRQVADGLEALASERQVEIEVDL 306 QATRMARLIDDLLSLSRVELS HVRP+ ID+ P+I+QVADGLE LA ERQV IE++L Sbjct: 259 QAQATRMARLIDDLLSLSRVELSVHVRPDTQIDLAPLIKQVADGLEPLAKERQVAIEIEL 318 Query: 307 PQAPVMIAGDREELLRLFENLIENALKYGASGGRVIVSLNQAVSGASGEGAPEIRVMVRD 366 P+AP +IAGDREELLR+FENLIENALKYGASGGRV VS+ S S +G E RV VRD Sbjct: 319 PEAPAVIAGDREELLRVFENLIENALKYGASGGRVAVSVG---SVPSSDGGVEYRVAVRD 375 Query: 367 FGPGIAPEHLPRLTERFYRVDVGDSRNQGGTGLGLSLVKHILNRHRGRLLIESVPKNGAA 426 FGPGI+PEHLPRLTERFYRVDVGDSR+QGGTGLGLSLVKHI+NRHRGRLLIESV KNGA Sbjct: 376 FGPGISPEHLPRLTERFYRVDVGDSRSQGGTGLGLSLVKHIVNRHRGRLLIESVMKNGAT 435 Query: 427 FTACFPRPKTP 437 FT CFP P+ P Sbjct: 436 FTVCFP-PEKP 445