BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0025.p (196 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAJ23985.1| TetR-family transcriptional regulator [Bradyrhiz... 392 e-107 ref|NP_767726.1| transcriptional regulator [Bradyrhizobium japon... 323 6e-87 ref|ZP_03266237.1| transcriptional regulator, TetR family [Burkh... 271 4e-71 ref|ZP_03132877.1| transcriptional regulator, TetR family [Chtho... 250 6e-65 ref|YP_004139392.1| TetR family transcription regulator [Mesorhi... 226 2e-57 >dbj|BAJ23985.1| TetR-family transcriptional regulator [Bradyrhizobium elkanii USDA 94] Length = 196 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 192/196 (97%), Positives = 193/196 (98%) Query: 1 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY 60 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY Sbjct: 1 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY 60 Query: 61 FLYVRGLVAEALGDTTLTPRERLRSYLDLITGKLAHDGFTRGCLIGDFSLEASGSSEMLR 120 FLYVRGLVAEALGDTTL PRERLRSYLDLITGKL HDGFTRGCLIGDFSLEASGSSEMLR Sbjct: 61 FLYVRGLVAEALGDTTLAPRERLRSYLDLITGKLTHDGFTRGCLIGDFSLEASGSSEMLR 120 Query: 121 EQLDDIFREWRAPFAACIAEAQATGEIAADFDPDQLADFLLASWQGAMLRMKVERSEAAL 180 EQLDDIFREWRAPFAACIAEAQA GEIA+DFDPDQLADFLLASWQGAMLRMKVERSEAAL Sbjct: 121 EQLDDIFREWRAPFAACIAEAQAMGEIASDFDPDQLADFLLASWQGAMLRMKVERSEAAL 180 Query: 181 TRFKTIAFQTVFKELP 196 TRFKTIAFQTVFKELP Sbjct: 181 TRFKTIAFQTVFKELP 196 >ref|NP_767726.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC46351.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 217 Score = 323 bits (829), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 159/195 (81%), Positives = 173/195 (88%) Query: 1 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY 60 MPK SL+DAILDAGLK MFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKE FASEVLDRY Sbjct: 22 MPKRSLKDAILDAGLKVMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKEAFASEVLDRY 81 Query: 61 FLYVRGLVAEALGDTTLTPRERLRSYLDLITGKLAHDGFTRGCLIGDFSLEASGSSEMLR 120 F RGLVAEAL DTTLTPR RL+ YLD+ITG+L DG+ RGCLIGD SLEA+GSSEMLR Sbjct: 82 FDVTRGLVAEALEDTTLTPRARLKRYLDIITGRLEADGYGRGCLIGDLSLEATGSSEMLR 141 Query: 121 EQLDDIFREWRAPFAACIAEAQATGEIAADFDPDQLADFLLASWQGAMLRMKVERSEAAL 180 +L +IF EWR PFAACIAEAQA GEIA+DF+P +LADFLLASWQGA+LRMKV+R+ AL Sbjct: 142 TRLTEIFAEWRVPFAACIAEAQARGEIASDFEPGELADFLLASWQGAILRMKVDRNPKAL 201 Query: 181 TRFKTIAFQTVFKEL 195 RFKTIAFQTVFKEL Sbjct: 202 ERFKTIAFQTVFKEL 216 >ref|ZP_03266237.1| transcriptional regulator, TetR family [Burkholderia sp. H160] gb|EEA02176.1| transcriptional regulator, TetR family [Burkholderia sp. H160] Length = 212 Score = 271 bits (693), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 130/194 (67%), Positives = 153/194 (78%) Query: 1 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY 60 M KPS R+ IL+AGLK M +TGY G SVRD+ AAAGAP GSFTNHFRSKE FA EVL+RY Sbjct: 17 MSKPSFREDILNAGLKVMLQTGYEGASVRDICAAAGAPHGSFTNHFRSKEAFAGEVLNRY 76 Query: 61 FLYVRGLVAEALGDTTLTPRERLRSYLDLITGKLAHDGFTRGCLIGDFSLEASGSSEMLR 120 F + + LV AL D L+PR+RL+ YLD+I+ LA D + RGCLIGDFSLE SE+LR Sbjct: 77 FAHTKELVKRALCDRALSPRQRLQRYLDIISAVLADDNWNRGCLIGDFSLETVSQSELLR 136 Query: 121 EQLDDIFREWRAPFAACIAEAQATGEIAADFDPDQLADFLLASWQGAMLRMKVERSEAAL 180 E+L+ IF+EWR PFA+CIAEAQ TGEI + FDP LA+FLLASW+GA+LRMKVER AAL Sbjct: 137 ERLEAIFQEWRGPFASCIAEAQGTGEIDSAFDPVDLAEFLLASWEGAILRMKVERGPAAL 196 Query: 181 TRFKTIAFQTVFKE 194 RFK I FQT+FKE Sbjct: 197 DRFKNIVFQTIFKE 210 >ref|ZP_03132877.1| transcriptional regulator, TetR family [Chthoniobacter flavus Ellin428] gb|EDY16426.1| transcriptional regulator, TetR family [Chthoniobacter flavus Ellin428] Length = 207 Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 123/193 (63%), Positives = 149/193 (77%) Query: 1 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY 60 MPK SLR+ +LDAG + M+ GY G +RD+ A A AP GSFTNHFRSKE FA EVL+R+ Sbjct: 1 MPKESLREKLLDAGFRVMYGKGYLGAGIRDIAAEANAPLGSFTNHFRSKEDFAVEVLERF 60 Query: 61 FLYVRGLVAEALGDTTLTPRERLRSYLDLITGKLAHDGFTRGCLIGDFSLEASGSSEMLR 120 F + +V +AL DT+L+P RLR YLDLIT +L GFT GC+IGDFSLE++ SE LR Sbjct: 61 FAETKKVVEQALQDTSLSPCARLRRYLDLITNRLESRGFTCGCMIGDFSLESAPHSEKLR 120 Query: 121 EQLDDIFREWRAPFAACIAEAQATGEIAADFDPDQLADFLLASWQGAMLRMKVERSEAAL 180 +L IF EWRAPFAACIAEAQATGEI + F+P+ LA+FLLASW+GA+LRMKVER+ A L Sbjct: 121 ARLAGIFAEWRAPFAACIAEAQATGEIGSAFEPEDLAEFLLASWEGAILRMKVERNAAPL 180 Query: 181 TRFKTIAFQTVFK 193 RFK IAF TVF+ Sbjct: 181 ERFKAIAFATVFQ 193 >ref|YP_004139392.1| TetR family transcription regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09342.1| regulatory protein TetR [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 198 Score = 226 bits (575), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 115/196 (58%), Positives = 136/196 (69%) Query: 1 MPKPSLRDAILDAGLKEMFRTGYHGTSVRDVTAAAGAPQGSFTNHFRSKELFASEVLDRY 60 M + SLR+ +LDAG + ++ +GY VRD+ AAA A GSFTNHF SKE FA EVLDRY Sbjct: 1 MARQSLRENLLDAGFRTIWNSGYAAAGVRDIVAAADARPGSFTNHFASKEEFAGEVLDRY 60 Query: 61 FLYVRGLVAEALGDTTLTPRERLRSYLDLITGKLAHDGFTRGCLIGDFSLEASGSSEMLR 120 F YV LV +AL P RLR Y+D+IT KL + RGC+IG+ SLE + SE LR Sbjct: 61 FAYVGTLVEKALAQDGTPPISRLRRYVDVITSKLEAHDWARGCMIGNLSLETAVHSEPLR 120 Query: 121 EQLDDIFREWRAPFAACIAEAQATGEIAADFDPDQLADFLLASWQGAMLRMKVERSEAAL 180 QL DIF WR PFAACIAE QA G+I+ F+ + LADFLL+SWQGAMLRMKVERS A L Sbjct: 121 LQLVDIFERWRQPFAACIAEGQAAGDISKTFEAEDLADFLLSSWQGAMLRMKVERSPAPL 180 Query: 181 TRFKTIAFQTVFKELP 196 RFK I F TVF + P Sbjct: 181 ERFKKIIFSTVFAKEP 196