BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0129.0014.p         (148 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773389.1| hypothetical protein blr6749 [Bradyrhizobium ja...   236   7e-61
ref|YP_004751211.1| hypothetical protein CFU_0552 [Collimonas fu...   182   2e-44
ref|YP_782616.1| hypothetical protein RPE_3707 [Rhodopseudomonas...   179   1e-43
ref|YP_001205220.1| hypothetical protein BRADO3188 [Bradyrhizobi...   155   3e-36
ref|ZP_06890151.1| protein of unknown function DUF1791 [Methylos...   154   5e-36

>ref|NP_773389.1| hypothetical protein blr6749 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52014.1| blr6749 [Bradyrhizobium japonicum USDA 110]
          Length = 181

 Score =  236 bits (603), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 112/149 (75%), Positives = 129/149 (86%), Gaps = 1/149 (0%)

Query: 1   MHRRSILWGTLSAIGAVLAASRADAATEAPP-QKLKVVYHLDDLDKVNFVIGNIQNHLDG 59
           M+RR+ILW  +SA+GA L ASRA AATEAPP  +LKVVYHL D +KVNFV+GNIQNH+DG
Sbjct: 33  MNRRNILWSAVSALGAALGASRAQAATEAPPSNRLKVVYHLSDAEKVNFVLGNIQNHIDG 92

Query: 60  VGGPGNVTIALVVHGQALKAFHSAAANPDLSKHVARFTKDGIEFAACANTMKSQNIGLAD 119
           VGGP +VTIALV+HG ALKAFHSA ANPD+SK V  F+KDG+E AAC NTMK+QN+ L D
Sbjct: 93  VGGPEHVTIALVIHGPALKAFHSAQANPDVSKRVGEFSKDGVELAACGNTMKAQNVTLTD 152

Query: 120 LLPGFAAAERGGVVRLAELQSQGYLYLRP 148
           LLPGF +AE+GGVVRLAELQSQGYLYLRP
Sbjct: 153 LLPGFVSAEKGGVVRLAELQSQGYLYLRP 181


>ref|YP_004751211.1| hypothetical protein CFU_0552 [Collimonas fungivorans Ter331]
 gb|AEK60388.1| hypothetical protein CFU_0552 [Collimonas fungivorans Ter331]
          Length = 152

 Score =  182 bits (462), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 96/152 (63%), Positives = 113/152 (74%), Gaps = 4/152 (2%)

Query: 1   MHRRSILWGTLSAIGA--VLA--ASRADAATEAPPQKLKVVYHLDDLDKVNFVIGNIQNH 56
           M RR+ILW   S+IGA  VLA  ASRA+AA  A   K KV YHL +LDK  FV+GNIQNH
Sbjct: 1   MQRRNILWTMFSSIGAAAVLAGTASRANAANAAGVDKAKVAYHLSELDKTGFVLGNIQNH 60

Query: 57  LDGVGGPGNVTIALVVHGQALKAFHSAAANPDLSKHVARFTKDGIEFAACANTMKSQNIG 116
            DG+GGP  V I LV+HG ALKAFHSA A+P+LS HVA   K G+  +AC NTMK+QN+ 
Sbjct: 61  FDGMGGPDQVKINLVIHGAALKAFHSAQASPELSAHVAELAKMGLGLSACVNTMKAQNVS 120

Query: 117 LADLLPGFAAAERGGVVRLAELQSQGYLYLRP 148
           L DLLPGF+ A++G VV LA+LQSQGY YLRP
Sbjct: 121 LKDLLPGFSVADKGAVVLLADLQSQGYAYLRP 152


>ref|YP_782616.1| hypothetical protein RPE_3707 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07636.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
          Length = 150

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 91/151 (60%), Positives = 115/151 (76%), Gaps = 4/151 (2%)

Query: 1   MHRRSILWGTLSAIGAVLAASRADAATEAPP---QKLKVVYHLDDLDKVNFVIGNIQNHL 57
           M RR++L   L+++GA L A+   A   A      KLKVVYHL DLD+V FV+GNI+NH+
Sbjct: 1   MQRRALLT-ALTSLGAALVAATPRARAAAAEAAADKLKVVYHLSDLDRVGFVLGNIRNHV 59

Query: 58  DGVGGPGNVTIALVVHGQALKAFHSAAANPDLSKHVARFTKDGIEFAACANTMKSQNIGL 117
           DGVGGP +VT+ALVVHG AL+AFH+ +A PD+S+ V  F + G+E AAC NTM +QN+ L
Sbjct: 60  DGVGGPDHVTLALVVHGPALRAFHAISAAPDISRRVDEFAQSGVELAACGNTMMAQNVSL 119

Query: 118 ADLLPGFAAAERGGVVRLAELQSQGYLYLRP 148
            DLLPGF  AERGGVVR+AELQS+GYLY+RP
Sbjct: 120 PDLLPGFVNAERGGVVRIAELQSRGYLYIRP 150


>ref|YP_001205220.1| hypothetical protein BRADO3188 [Bradyrhizobium sp. ORS 278]
 emb|CAL76985.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 129

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 92/131 (70%), Gaps = 2/131 (1%)

Query: 18  LAASRADAATEAPPQKLKVVYHLDDLDKVNFVIGNIQNHLDGVGGPGNVTIALVVHGQAL 77
           +    A AATE+P Q+  V YHL D D+  FV+GNIQNH+DG GGPG+  I LV+HG  L
Sbjct: 1   MGVGSARAATESPRQR--VAYHLADQDRALFVLGNIQNHVDGTGGPGHADIRLVIHGPGL 58

Query: 78  KAFHSAAANPDLSKHVARFTKDGIEFAACANTMKSQNIGLADLLPGFAAAERGGVVRLAE 137
           +AFH+ +A+  +S    R  K G+ F ACANTMK+Q + L DLLPGFA AE+GGVVRL E
Sbjct: 59  RAFHAISADQTISGLAERLMKAGVSFEACANTMKAQGVKLDDLLPGFAVAEKGGVVRLTE 118

Query: 138 LQSQGYLYLRP 148
           LQ  GY YLRP
Sbjct: 119 LQQSGYAYLRP 129


>ref|ZP_06890151.1| protein of unknown function DUF1791 [Methylosinus trichosporium
           OB3b]
 gb|EFH01382.1| protein of unknown function DUF1791 [Methylosinus trichosporium
           OB3b]
          Length = 144

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 87/113 (76%)

Query: 36  VVYHLDDLDKVNFVIGNIQNHLDGVGGPGNVTIALVVHGQALKAFHSAAANPDLSKHVAR 95
           V YHL DLDK  FV+GNI NH+ G GGPG +T+ALVVHG AL+AFH+  A+ D+ K +AR
Sbjct: 32  VAYHLSDLDKARFVLGNISNHIAGCGGPGGITVALVVHGPALRAFHAIDADADVEKSLAR 91

Query: 96  FTKDGIEFAACANTMKSQNIGLADLLPGFAAAERGGVVRLAELQSQGYLYLRP 148
              DG++  ACA TMK+Q + L+DLLPGFA AE+G VVRL ELQ QGY+YLRP
Sbjct: 92  LKGDGVDPIACAITMKAQKVALSDLLPGFAVAEKGAVVRLGELQQQGYVYLRP 144