BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0011.p (424 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773395.1| hypothetical protein bll6755 [Bradyrhizobium ja... 726 0.0 ref|YP_001242137.1| hypothetical protein BBta_6313 [Bradyrhizobi... 700 0.0 ref|YP_001207688.1| hypothetical protein BRADO5805 [Bradyrhizobi... 694 0.0 ref|YP_002976619.1| hypothetical protein Rleg_2819 [Rhizobium le... 551 e-155 ref|YP_002282059.1| hypothetical protein Rleg2_2560 [Rhizobium l... 550 e-154 >ref|NP_773395.1| hypothetical protein bll6755 [Bradyrhizobium japonicum USDA 110] sp|P59348.1|Y6755_BRAJA RecName: Full=UPF0229 protein bll6755 dbj|BAC52020.1| bll6755 [Bradyrhizobium japonicum USDA 110] Length = 427 Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/422 (84%), Positives = 379/422 (89%), Gaps = 1/422 (0%) Query: 3 MHIVDRRLNPGSKSLENRQRFLRRAKALVQGAVKKSSQDRDIKDVLEGGEVTIPLDGMDE 62 +HI+DRRLNPG KSLENRQRFLRRAK+LVQGAVKK+SQ+RDIKDVLEGGEVTIPLDGM E Sbjct: 3 IHIIDRRLNPGGKSLENRQRFLRRAKSLVQGAVKKTSQERDIKDVLEGGEVTIPLDGMHE 62 Query: 63 PRFRREGGTRDMVLPGNKKFVEGDWLQRPNQSGAKGSGAGEGDSEDAFRFVLSREEFVDL 122 PRFRREGGTRDMVLPGNKKFVEGD+LQR Q AK SG GEGDSEDAFRFVLSR+EFVDL Sbjct: 63 PRFRREGGTRDMVLPGNKKFVEGDYLQRSGQGSAKDSGPGEGDSEDAFRFVLSRDEFVDL 122 Query: 123 FLDDLELPDLAKRKLAETESEGIQRAGYATSGSPANISISRTVSRALARRVALRRPRKEE 182 FLDDLELPDLAKRK+A+TESEGIQRAGY TSGSPANIS+SRTV ALARR+AL+RPRK+E Sbjct: 123 FLDDLELPDLAKRKIAQTESEGIQRAGYTTSGSPANISVSRTVKLALARRIALKRPRKDE 182 Query: 183 IEALEAELAECDDATRRRELLALLEALRAKAKRIPFIDPIDIRYRRFETVPKPVAQAVMF 242 IE LEA +A C D R LLA LE L AK KRIPFIDP+DIRYRRFETVPKPVAQAVMF Sbjct: 183 IEELEAAIAACTDEDERVVLLAELEKLMAKTKRIPFIDPLDIRYRRFETVPKPVAQAVMF 242 Query: 243 CLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDEDTFFHGPAS 302 CLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDE TFF+GPAS Sbjct: 243 CLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDEQTFFYGPAS 302 Query: 303 GGTLVSSALVAMNDIVRTRFRPADWNIYAAQASDGDNMTSDSALTGHLLTDKILPVCQFF 362 GGTLVSSAL AM+DIVR RF P+DWNIYAAQASDGDN SD LTG LLTDKILPVCQFF Sbjct: 303 GGTLVSSALQAMHDIVRERFNPSDWNIYAAQASDGDNSYSDGELTGLLLTDKILPVCQFF 362 Query: 363 AYLEVGEAANYTFDMPDSSLWTLYERLRNEGAPLSMRKVSERGEIFPVFQDLFKRR-SKQ 421 AYLEVGE+ FD+ DSSLWTLYERLRN GAPLSMRKVSER EIFPVF DLF+RR + Q Sbjct: 363 AYLEVGESGGSAFDLSDSSLWTLYERLRNSGAPLSMRKVSERSEIFPVFHDLFQRRETSQ 422 Query: 422 ER 423 E+ Sbjct: 423 EK 424 >ref|YP_001242137.1| hypothetical protein BBta_6313 [Bradyrhizobium sp. BTAi1] gb|ABQ38231.1| hypothetical protein BBta_6313 [Bradyrhizobium sp. BTAi1] Length = 425 Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/422 (80%), Positives = 373/422 (88%), Gaps = 1/422 (0%) Query: 3 MHIVDRRLNPGSKSLENRQRFLRRAKALVQGAVKKSSQDRDIKDVLEGGEVTIPLDGMDE 62 MHI+DRRLNPG KSLENRQRFLRRAKALVQGAVKK+SQDRDIKDVLEGGEV+IPLDGMDE Sbjct: 1 MHIIDRRLNPGGKSLENRQRFLRRAKALVQGAVKKTSQDRDIKDVLEGGEVSIPLDGMDE 60 Query: 63 PRFRREGGTRDMVLPGNKKFVEGDWLQRPNQSGAKGSGAGEGDSEDAFRFVLSREEFVDL 122 PRFRREGGTRDMVLPGNKKF+EGD L R + SG G+GDSEDAFRFVLS+EEFV+L Sbjct: 61 PRFRREGGTRDMVLPGNKKFIEGDILPRSGDGSGRKSGPGQGDSEDAFRFVLSKEEFVNL 120 Query: 123 FLDDLELPDLAKRKLAETESEGIQRAGYATSGSPANISISRTVSRALARRVALRRPRKEE 182 FLDDLELPDLAKRK AE ESEG+ RAGY+TSGSPANISISRTV+RA+ARRVALRRPR E Sbjct: 121 FLDDLELPDLAKRKFAEAESEGLVRAGYSTSGSPANISISRTVTRAMARRVALRRPRPEA 180 Query: 183 IEALEAELAECDDATRRRELLALLEALRAKAKRIPFIDPIDIRYRRFETVPKPVAQAVMF 242 I EA++AE D ++ L+A LEAL+AKAKRIPFIDPIDIRYRRFE VPKP+AQAVMF Sbjct: 181 IAEFEAKIAEETDEEKKAALVAELEALKAKAKRIPFIDPIDIRYRRFEAVPKPIAQAVMF 240 Query: 243 CLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDEDTFFHGPAS 302 CLMDVSGSMSEHMKDLAKRFYMLLYVFL RRY+HVEIVFIRHTDRAEEVDE TFF+GPAS Sbjct: 241 CLMDVSGSMSEHMKDLAKRFYMLLYVFLTRRYRHVEIVFIRHTDRAEEVDEQTFFYGPAS 300 Query: 303 GGTLVSSALVAMNDIVRTRFRPADWNIYAAQASDGDNMTSDSALTGHLLTDKILPVCQFF 362 GGTLVSSAL M+DIVR+RFRP+DWNIYAAQASDGDN TSDS LLTD ILPV QFF Sbjct: 301 GGTLVSSALQCMHDIVRSRFRPSDWNIYAAQASDGDNATSDSENVARLLTDNILPVSQFF 360 Query: 363 AYLEVGEAANYTFDMPDSSLWTLYERLRNEGAPLSMRKVSERGEIFPVFQDLFKRR-SKQ 421 AYLEVGE+ Y+F+MPDS+LW+LYERLR G PLSMRKV +R EIFPVF DLF+RR + Q Sbjct: 361 AYLEVGESGTYSFEMPDSALWSLYERLRANGQPLSMRKVRDRSEIFPVFHDLFQRRGTTQ 420 Query: 422 ER 423 ER Sbjct: 421 ER 422 >ref|YP_001207688.1| hypothetical protein BRADO5805 [Bradyrhizobium sp. ORS 278] emb|CAL79471.1| conserved hypothetical protein YeaH [Bradyrhizobium sp. ORS 278] Length = 425 Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/422 (80%), Positives = 371/422 (87%), Gaps = 1/422 (0%) Query: 3 MHIVDRRLNPGSKSLENRQRFLRRAKALVQGAVKKSSQDRDIKDVLEGGEVTIPLDGMDE 62 MHI+DRRLNPG KSLENRQRFLRRAKALVQGAVKK+SQDRDIKDVLEGGEV+IPLDGMDE Sbjct: 1 MHIIDRRLNPGGKSLENRQRFLRRAKALVQGAVKKTSQDRDIKDVLEGGEVSIPLDGMDE 60 Query: 63 PRFRREGGTRDMVLPGNKKFVEGDWLQRPNQSGAKGSGAGEGDSEDAFRFVLSREEFVDL 122 PRFRREGGTRDMVLPGNKKF+EGD L R + SG G+GDSEDAFRFVLS+EEFV+L Sbjct: 61 PRFRREGGTRDMVLPGNKKFIEGDILPRSGDGSGRKSGPGQGDSEDAFRFVLSKEEFVNL 120 Query: 123 FLDDLELPDLAKRKLAETESEGIQRAGYATSGSPANISISRTVSRALARRVALRRPRKEE 182 FLDDLELPDLAKRK AE ESEG+ RAGY+TSGSPANISISRTV+RA+ARRVALRRPR E Sbjct: 121 FLDDLELPDLAKRKFAEAESEGLVRAGYSTSGSPANISISRTVTRAMARRVALRRPRPEA 180 Query: 183 IEALEAELAECDDATRRRELLALLEALRAKAKRIPFIDPIDIRYRRFETVPKPVAQAVMF 242 I LE ++ + D ++ L+A LE L+AKAKRIPFIDPIDIRYRRFE VPKP+AQAVMF Sbjct: 181 IAELEDKIEQETDEEKKAALVAELEGLKAKAKRIPFIDPIDIRYRRFEAVPKPIAQAVMF 240 Query: 243 CLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDEDTFFHGPAS 302 CLMDVSGSMSEHMKDLAKRFYMLLYVFL RRY+HVEIVFIRHTDRAEEVDE TFF+GPAS Sbjct: 241 CLMDVSGSMSEHMKDLAKRFYMLLYVFLTRRYRHVEIVFIRHTDRAEEVDEQTFFYGPAS 300 Query: 303 GGTLVSSALVAMNDIVRTRFRPADWNIYAAQASDGDNMTSDSALTGHLLTDKILPVCQFF 362 GGTLVSSAL M+DIVR+RFRP+DWNIYAAQASDGDN TSDS LLTD ILPV QFF Sbjct: 301 GGTLVSSALQCMHDIVRSRFRPSDWNIYAAQASDGDNATSDSENVARLLTDNILPVSQFF 360 Query: 363 AYLEVGEAANYTFDMPDSSLWTLYERLRNEGAPLSMRKVSERGEIFPVFQDLFKRR-SKQ 421 AYLEVGE+ Y+F+MPDS+LW+LYERLR G PLSMRKV +R EIFPVF DLF+RR + Q Sbjct: 361 AYLEVGESGTYSFEMPDSALWSLYERLRANGQPLSMRKVRDRSEIFPVFHDLFQRRGTTQ 420 Query: 422 ER 423 ER Sbjct: 421 ER 422 >ref|YP_002976619.1| hypothetical protein Rleg_2819 [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS57080.1| protein of unknown function DUF444 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 423 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 285/424 (67%), Positives = 339/424 (79%), Gaps = 5/424 (1%) Query: 3 MHIVDRRLNPGSKSLENRQRFLRRAKALVQGAVKKSSQDRDIKDVLEGGEVTIPLDGMDE 62 MHIVDRRLNP KSLENRQRFLRR K VQ AVK+S Q+R+I+DVL+GGE+++P+DGM E Sbjct: 1 MHIVDRRLNPRGKSLENRQRFLRRMKGAVQQAVKRSLQNRNIRDVLDGGEISLPIDGMAE 60 Query: 63 PRFRR-EGGTRDMVLPGNKKFVEGDWLQRPNQS-GAKGSGAGEGDSEDAFRFVLSREEFV 120 P RR +GG RD +LPGN+ FVEGD L RP S G K AGEGD ED FRFVL+REEF+ Sbjct: 61 PNLRRGDGGIRDHILPGNRAFVEGDILPRPPGSRGGKPKDAGEGDGEDGFRFVLTREEFL 120 Query: 121 DLFLDDLELPDLAKRKLAETESEGIQRAGYATSGSPANISISRTVSRALARRVALRRPRK 180 D+FLDDLELPDLAKR+LAETE E RAGY+ SGSP+NI++ RT A+ RRVAL RPR+ Sbjct: 121 DVFLDDLELPDLAKRRLAETEEETPSRAGYSVSGSPSNIAVGRTTRLAMMRRVALHRPRR 180 Query: 181 EEIEALEAELAECDDATRRRELLALLEALRAKAKRIPFIDPIDIRYRRFETVPKPVAQAV 240 EEIEAL+ ++ EC+D R L A L++L K++RIP+IDP+D+RYRRFE PKPVA+AV Sbjct: 181 EEIEALQRQIEECEDDESRLALEAKLKSLTEKSRRIPYIDPLDVRYRRFENEPKPVAKAV 240 Query: 241 MFCLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDEDTFFHGP 300 MFCLMDVSGSMSEHMKDLAKRFY+LLY+FL +RYK VEIVFIRHTD+AEEVDE+TFF+GP Sbjct: 241 MFCLMDVSGSMSEHMKDLAKRFYLLLYLFLSKRYKKVEIVFIRHTDKAEEVDEETFFYGP 300 Query: 301 ASGGTLVSSALVAMNDIVRTRFRPADWNIYAAQASDGDNMTSDSALTGHLLTDKILPVCQ 360 A+GGTLVSSAL AM I+ RF PA+WNIY AQASDGDN SD LTG LL + ILP+CQ Sbjct: 301 ATGGTLVSSALAAMRGIIAARFDPAEWNIYGAQASDGDNAHSDGNLTGQLLHE-ILPLCQ 359 Query: 361 FFAYLEVGEAANYTFDMPDSSLWTLYERLRNEGAPLSMRKVSERGEIFPVFQDLFKRRSK 420 +FAY+EVGE + + S LW LY+ +R+E PLSMRKV R EIFPVF DLF++R Sbjct: 360 YFAYIEVGEEGGDS-SVSRSPLWMLYDGIRSE-LPLSMRKVCRRSEIFPVFHDLFQKRDA 417 Query: 421 QERV 424 Q RV Sbjct: 418 QSRV 421 >ref|YP_002282059.1| hypothetical protein Rleg2_2560 [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI55833.1| protein of unknown function DUF444 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 424 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 282/424 (66%), Positives = 338/424 (79%), Gaps = 4/424 (0%) Query: 3 MHIVDRRLNPGSKSLENRQRFLRRAKALVQGAVKKSSQDRDIKDVLEGGEVTIPLDGMDE 62 MHIVDRRLNP KSLENRQRFLRR K VQ AVK+S Q+R+I+DVL+GGE+++P+DGM E Sbjct: 1 MHIVDRRLNPRGKSLENRQRFLRRMKGAVQQAVKRSLQNRNIRDVLDGGEISLPIDGMAE 60 Query: 63 PRFRR-EGGTRDMVLPGNKKFVEGDWLQRP-NQSGAKGSGAGEGDSEDAFRFVLSREEFV 120 P R+ EGGT D +LPGN+ FVEGD + RP G K AGEGD ED FRFVL+REEF+ Sbjct: 61 PSLRKGEGGTADHILPGNRAFVEGDIIPRPPGGRGGKPKDAGEGDGEDGFRFVLTREEFL 120 Query: 121 DLFLDDLELPDLAKRKLAETESEGIQRAGYATSGSPANISISRTVSRALARRVALRRPRK 180 D+FLDDLELPDLAKR+LAETE E RAGY+ SGSP+NI++ RT A+ RRVAL RPR+ Sbjct: 121 DVFLDDLELPDLAKRRLAETEEETPLRAGYSVSGSPSNIAVGRTTRLAMMRRVALHRPRR 180 Query: 181 EEIEALEAELAECDDATRRRELLALLEALRAKAKRIPFIDPIDIRYRRFETVPKPVAQAV 240 EEIEAL+ ++ EC+D R L A L++L K++RIP+IDP+D+RYRRFE PKPVA+AV Sbjct: 181 EEIEALQRQIEECEDDESRLALEAKLKSLTEKSRRIPYIDPLDVRYRRFENEPKPVAKAV 240 Query: 241 MFCLMDVSGSMSEHMKDLAKRFYMLLYVFLKRRYKHVEIVFIRHTDRAEEVDEDTFFHGP 300 MFCLMDVSGSMSEHMKDLAKRFY+LLY+FL +RYK VEIVFIRHTD+AEEVDE+TFF+GP Sbjct: 241 MFCLMDVSGSMSEHMKDLAKRFYLLLYLFLSKRYKKVEIVFIRHTDKAEEVDEETFFYGP 300 Query: 301 ASGGTLVSSALVAMNDIVRTRFRPADWNIYAAQASDGDNMTSDSALTGHLLTDKILPVCQ 360 A+GGTLVSSAL AM I+ RF PA+WNIY AQASDGDN SD L+G LL + ILP+CQ Sbjct: 301 ATGGTLVSSALAAMRGIIAARFDPAEWNIYGAQASDGDNAHSDGNLSGQLLRE-ILPLCQ 359 Query: 361 FFAYLEVGEAANYTFDMPDSSLWTLYERLRNEGAPLSMRKVSERGEIFPVFQDLFKRRSK 420 +FAY+EVGE + + S LW LY+ +R+E PLSMRKV R EIFPVF DLF++R Sbjct: 360 YFAYIEVGEEGGDS-SVSRSPLWMLYDGIRSELLPLSMRKVCRRSEIFPVFHDLFQKRDA 418 Query: 421 QERV 424 Q RV Sbjct: 419 QSRV 422