BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0009.p (300 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773394.1| SpoVR family protein [Bradyrhizobium japonicum ... 524 e-147 ref|YP_001207687.1| SpoVR family protein [Bradyrhizobium sp. ORS... 520 e-145 ref|YP_001242136.1| SpoVR family protein [Bradyrhizobium sp. BTA... 518 e-145 ref|YP_002545765.1| hypothetical protein Arad_4029 [Agrobacteriu... 459 e-127 ref|YP_470310.1| hypothetical protein RHE_CH02815 [Rhizobium etl... 450 e-124 >ref|NP_773394.1| SpoVR family protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52019.1| bll6754 [Bradyrhizobium japonicum USDA 110] Length = 512 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 247/301 (82%), Positives = 274/301 (91%), Gaps = 2/301 (0%) Query: 1 VPNTKAKSKAALTAERRRALLGLPQENILYFLEKTAPRLAPWQRELIRIVRHIAQYFYPQ 60 VP K+KS++AL+ ERRR LLGLPQEN+LYFLEK+APRLAPWQREL+RIVRHIAQYFYPQ Sbjct: 212 VPAGKSKSRSALSVERRRKLLGLPQENLLYFLEKSAPRLAPWQRELLRIVRHIAQYFYPQ 271 Query: 61 GQTKVMNEGTATYVHYRIMSRLHQQGRITDGNFLEFLQSHTNVVFQPEFDDRRYSGFNPY 120 QTKVMNEGTATYVHYRIM++LHQQGRITDGNFLEFL SHTNVVFQPEFDD R+SGFNPY Sbjct: 272 SQTKVMNEGTATYVHYRIMTKLHQQGRITDGNFLEFLGSHTNVVFQPEFDDPRFSGFNPY 331 Query: 121 ALGFAMMQDIERIVKNPEDEDREWFPDIAGKGDVEGVLREIWGNYRDESFINQFLSPALI 180 ALGFAMMQDIERIV +P DEDREWFPDIAGK DV GVLR++W NYRDESFI QFLSP L+ Sbjct: 332 ALGFAMMQDIERIVTSPSDEDREWFPDIAGKNDVMGVLRDVWANYRDESFIGQFLSPKLM 391 Query: 181 RRFRMFHLHDDPAESQGIKVDAIHDERGYRRVRRELARQYDVGFVDANIEVVDVDLDGDR 240 R+ RMFHLHDDP E GI+VDAIHDERG+RRVRRELARQ+DVG++DANIEVVDVDL GDR Sbjct: 392 RQLRMFHLHDDPEERAGIRVDAIHDERGFRRVRRELARQHDVGYIDANIEVVDVDLSGDR 451 Query: 241 RLMLRHTTVKGAQLNETDARRVLQHLADLWSYDVALTEIDGSDKVLKEYVVSPR--AAAV 298 RL+L H +KGAQLNETDA+RVLQHLADLW+YDVAL E+D +DKVL+EYVVSPR AAV Sbjct: 452 RLILHHHVIKGAQLNETDAKRVLQHLADLWTYDVALIEVDANDKVLREYVVSPRPIPAAV 511 Query: 299 A 299 A Sbjct: 512 A 512 >ref|YP_001207687.1| SpoVR family protein [Bradyrhizobium sp. ORS 278] emb|CAL79470.1| conserved hypothetical protein YcgB [Bradyrhizobium sp. ORS 278] Length = 512 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 245/301 (81%), Positives = 270/301 (89%), Gaps = 1/301 (0%) Query: 1 VPNTKAKSKAALTAERRRALLGLPQENILYFLEKTAPRLAPWQRELIRIVRHIAQYFYPQ 60 VP AK+ A L ERRRALLGLPQEN+LYFLEK+APRLAPWQREL+RIVRHIAQYFYPQ Sbjct: 212 VPTGPAKTSAVLNVERRRALLGLPQENLLYFLEKSAPRLAPWQRELLRIVRHIAQYFYPQ 271 Query: 61 GQTKVMNEGTATYVHYRIMSRLHQQGRITDGNFLEFLQSHTNVVFQPEFDDRRYSGFNPY 120 GQTKVMNEGTATYVHYRIM RLH++GR+TDGNFLEFLQSHTNVVFQPEFDD R+SGFNPY Sbjct: 272 GQTKVMNEGTATYVHYRIMKRLHEEGRLTDGNFLEFLQSHTNVVFQPEFDDPRFSGFNPY 331 Query: 121 ALGFAMMQDIERIVKNPEDEDREWFPDIAGKGDVEGVLREIWGNYRDESFINQFLSPALI 180 ALGFA+MQDIERIVK+P +EDREWFPDIAG GD VLR++W NYRDESFI+QFLSP LI Sbjct: 332 ALGFAIMQDIERIVKDPTEEDREWFPDIAGTGDEMAVLRDVWANYRDESFISQFLSPNLI 391 Query: 181 RRFRMFHLHDDPAESQGIKVDAIHDERGYRRVRRELARQYDVGFVDANIEVVDVDLDGDR 240 R FR+FHLHDDPAE GI VDAIHDERGYRR+RREL++QYDVG++D NIEVVDVDL GDR Sbjct: 392 RHFRLFHLHDDPAERAGILVDAIHDERGYRRIRRELSKQYDVGYIDPNIEVVDVDLAGDR 451 Query: 241 RLMLRHTTVKGAQLNETDARRVLQHLADLWSYDVALTEID-GSDKVLKEYVVSPRAAAVA 299 RLMLRHT VKGAQLNETD +RVLQHLADLWSYDV LTE+D +DKVLKEYV++PR A Sbjct: 452 RLMLRHTVVKGAQLNETDTKRVLQHLADLWSYDVQLTEVDAATDKVLKEYVLNPRIQPAA 511 Query: 300 A 300 A Sbjct: 512 A 512 >ref|YP_001242136.1| SpoVR family protein [Bradyrhizobium sp. BTAi1] gb|ABQ38230.1| putative SpoVR like protein (sporulation protein) [Bradyrhizobium sp. BTAi1] Length = 512 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 243/301 (80%), Positives = 271/301 (90%), Gaps = 1/301 (0%) Query: 1 VPNTKAKSKAALTAERRRALLGLPQENILYFLEKTAPRLAPWQRELIRIVRHIAQYFYPQ 60 VP K+ A L ERR+ALLGLPQEN+LYFLEKTAPRLAPWQREL+RIVRHIAQYFYPQ Sbjct: 212 VPTGPVKTSAVLNVERRKALLGLPQENLLYFLEKTAPRLAPWQRELLRIVRHIAQYFYPQ 271 Query: 61 GQTKVMNEGTATYVHYRIMSRLHQQGRITDGNFLEFLQSHTNVVFQPEFDDRRYSGFNPY 120 GQTKVMNEGTATYVHYRIM+RLHQ+GR+TDGNFLEFLQSHTNVVFQPEFDD R+SGFNPY Sbjct: 272 GQTKVMNEGTATYVHYRIMNRLHQEGRLTDGNFLEFLQSHTNVVFQPEFDDPRFSGFNPY 331 Query: 121 ALGFAMMQDIERIVKNPEDEDREWFPDIAGKGDVEGVLREIWGNYRDESFINQFLSPALI 180 ALGFA+MQDIERIVK+P +EDREWFPDIAG GD VLR++W NYRDESFI+QFLSP LI Sbjct: 332 ALGFAIMQDIERIVKDPTEEDREWFPDIAGTGDEMAVLRDVWANYRDESFISQFLSPNLI 391 Query: 181 RRFRMFHLHDDPAESQGIKVDAIHDERGYRRVRRELARQYDVGFVDANIEVVDVDLDGDR 240 R+FR+FHLHDDPAE GI VDAIHDERGYRR+RREL++QYDVG++D NIEVVDVDL GDR Sbjct: 392 RQFRLFHLHDDPAERAGILVDAIHDERGYRRIRRELSKQYDVGYIDPNIEVVDVDLAGDR 451 Query: 241 RLMLRHTTVKGAQLNETDARRVLQHLADLWSYDVALTEID-GSDKVLKEYVVSPRAAAVA 299 RLMLRHT VKGAQL+ETD +RVLQHLADLWSYDV+L E+D +DKVLKEYV++PR A Sbjct: 452 RLMLRHTVVKGAQLSETDTKRVLQHLADLWSYDVSLVEVDAATDKVLKEYVLNPRIQPAA 511 Query: 300 A 300 A Sbjct: 512 A 512 >ref|YP_002545765.1| hypothetical protein Arad_4029 [Agrobacterium radiobacter K84] gb|ACM27834.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 517 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 211/300 (70%), Positives = 252/300 (84%) Query: 1 VPNTKAKSKAALTAERRRALLGLPQENILYFLEKTAPRLAPWQRELIRIVRHIAQYFYPQ 60 VP K K L ERRR+L GLPQEN+LYFLEK APRL PWQRE++RIVRH+AQYFYPQ Sbjct: 218 VPVGKGKVMPDLDFERRRSLAGLPQENVLYFLEKMAPRLKPWQREILRIVRHVAQYFYPQ 277 Query: 61 GQTKVMNEGTATYVHYRIMSRLHQQGRITDGNFLEFLQSHTNVVFQPEFDDRRYSGFNPY 120 QTKVMNEGTATYVHYRIM+RLH+ G I DG+FLEFL+SHTNVVFQP F+D+RYSG NPY Sbjct: 278 SQTKVMNEGTATYVHYRIMTRLHELGGIGDGDFLEFLKSHTNVVFQPSFNDQRYSGLNPY 337 Query: 121 ALGFAMMQDIERIVKNPEDEDREWFPDIAGKGDVEGVLREIWGNYRDESFINQFLSPALI 180 ALGFAMMQDIERIV P++EDR WFPDIAG GD VLR++W NYRDESF++QFLSP L+ Sbjct: 338 ALGFAMMQDIERIVTKPKEEDRLWFPDIAGTGDAMAVLRDLWANYRDESFVSQFLSPHLM 397 Query: 181 RRFRMFHLHDDPAESQGIKVDAIHDERGYRRVRRELARQYDVGFVDANIEVVDVDLDGDR 240 R+ RMFHL DDP E +G++V AIHDERGYRR+RRELARQYDVG++D +IE+VDVDL GDR Sbjct: 398 RKMRMFHLTDDPEEEEGLRVAAIHDERGYRRIRRELARQYDVGWIDPHIEIVDVDLAGDR 457 Query: 241 RLMLRHTTVKGAQLNETDARRVLQHLADLWSYDVALTEIDGSDKVLKEYVVSPRAAAVAA 300 RL+++HT + G L + DA+RVLQHLADLWSYDV + E+D + VL+E++ PR ++VAA Sbjct: 458 RLLVKHTVLNGGFLEDADAKRVLQHLADLWSYDVLMQEVDSTGLVLREHLAHPRLSSVAA 517 >ref|YP_470310.1| hypothetical protein RHE_CH02815 [Rhizobium etli CFN 42] gb|ABC91583.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 514 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 205/294 (69%), Positives = 247/294 (84%) Query: 1 VPNTKAKSKAALTAERRRALLGLPQENILYFLEKTAPRLAPWQRELIRIVRHIAQYFYPQ 60 VP KAK + E+RRA LGLPQ+NILYFLEK+APRL PWQRE++RIVRH+AQYF+PQ Sbjct: 217 VPVGKAKKAGDIGLEKRRAALGLPQDNILYFLEKSAPRLQPWQREILRIVRHVAQYFHPQ 276 Query: 61 GQTKVMNEGTATYVHYRIMSRLHQQGRITDGNFLEFLQSHTNVVFQPEFDDRRYSGFNPY 120 QTKVMNEGTAT+VHY+IM+RLH++G+I+DGNFLEFL+SH NVVFQP +DDRR+SGFNPY Sbjct: 277 RQTKVMNEGTATFVHYQIMNRLHERGQISDGNFLEFLKSHANVVFQPNYDDRRFSGFNPY 336 Query: 121 ALGFAMMQDIERIVKNPEDEDREWFPDIAGKGDVEGVLREIWGNYRDESFINQFLSPALI 180 ALGFAMMQDIERIV P +EDR WFPDIAG+GD GVLR+IW NYRDESFI+QFLSP LI Sbjct: 337 ALGFAMMQDIERIVTKPTEEDRAWFPDIAGRGDAMGVLRDIWANYRDESFISQFLSPNLI 396 Query: 181 RRFRMFHLHDDPAESQGIKVDAIHDERGYRRVRRELARQYDVGFVDANIEVVDVDLDGDR 240 RR R+FHL+DDP +++G+ V AIH+ERGY R+RR+L+R+YD+G+ D I++VDVDL GDR Sbjct: 397 RRLRLFHLYDDPEQTEGVLVSAIHNERGYLRIRRQLSREYDIGWTDPAIDIVDVDLAGDR 456 Query: 241 RLMLRHTTVKGAQLNETDARRVLQHLADLWSYDVALTEIDGSDKVLKEYVVSPR 294 RL+L+H + G L E D + VLQHLADLW YDV L EIDGS V KE+ SPR Sbjct: 457 RLLLQHIVMNGCYLQEGDTKLVLQHLADLWGYDVLLQEIDGSSTVAKEHTASPR 510