BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0129.0001.p         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08629654.1| hypothetical protein CSIRO_2748 [Bradyrhizobi...   260   3e-67
ref|YP_001635127.1| hypothetical protein Caur_1518 [Chloroflexus...    38   3.1  
ref|ZP_06163651.1| PTS system beta-glucoside-specific EIIBCA com...    37   5.6  
ref|ZP_03978293.1| dimethyladenosine transferase [Corynebacteriu...    37   6.7  

>ref|ZP_08629654.1| hypothetical protein CSIRO_2748 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08147.1| hypothetical protein CSIRO_2748 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 494

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 175/316 (55%), Positives = 206/316 (65%), Gaps = 2/316 (0%)

Query: 1   MRPARITPQVRPVRIRRVGVVGAPPGDGLAPRRHDRAHAPRQRIVRIGLQVVLIALQRVA 60
           MR  RIT QV PV + RVG +G PP D LA R ++R H  R RIVRIG +  L+    VA
Sbjct: 118 MRAFRITLQVGPVGLLRVGTIGLPPCDRLAARGNNRPHPLRHRIVRIGSEKRLVIRNGVA 177

Query: 61  LERRGVGILRREIADRLGAQPG--IDLLRRRVRLAFEEHEGRVDLVRIPRDLGALGHLVD 118
           LE  GVG+LR EIADRLG++ G  I L RRR+    EEHE   +L+RIPR L ALGH+VD
Sbjct: 178 LEGCGVGVLRAEIADRLGSRGGVLIGLQRRRIERTVEEHEVAFELLRIPRHLRALGHVVD 237

Query: 119 AQADAVEHLGQGQAAGADHFRQRLRIRPVRRRPVGGDGAGRRVEGDQQLRIGIDQRKTAG 178
           AQ  AVEH  Q  AAGADHFRQRLRIR V       D + R VE DQ LR+ + Q K AG
Sbjct: 238 AQPGAVEHFRQRDAAGADHFRQRLRIRSVVAGRDRRDRSRRGVESDQALRLRLHQGKAAG 297

Query: 179 QRLAFLGEGIAARRIEHDHAGLDRQRRELMAVVGDTDRLDRHVCVAGDLGVHRHEVVLAG 238
           +RLAFLGE      +EHD+ GL+RQRR+L  VV D     R+V +A    + R EVVLA 
Sbjct: 298 ERLAFLGERRVIGGVEHDNVGLERQRRQLADVVADPQAFHRNVGIACHRRIDRREVVLAC 357

Query: 239 ELHAVAGEIDEGDGIGPRLLHLLDEIAERFAQRFAVEVACADHVEAGGLQGLRDQAGIVR 298
           +L  +AG+ID  D I P LL LLDEIAE   QR AVEVA ADH+EA  LQ LR+QAGIV 
Sbjct: 358 KLQTIAGQIDHRDRIRPCLLCLLDEIAEGLPQRLAVEVAGADHIEASRLQRLRNQAGIVG 417

Query: 299 GGLQRAGLMGAVADDE 314
           G  QR   + AVAD +
Sbjct: 418 GSRQRRARVIAVADHQ 433


>ref|YP_001635127.1| hypothetical protein Caur_1518 [Chloroflexus aurantiacus J-10-fl]
 ref|YP_002569387.1| hypothetical protein Chy400_1650 [Chloroflexus sp. Y-400-fl]
 gb|ABY34738.1| protein of unknown function UPF0052 and CofD [Chloroflexus
           aurantiacus J-10-fl]
 gb|ACM53061.1| protein of unknown function UPF0052 and CofD [Chloroflexus sp.
           Y-400-fl]
          Length = 391

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 198 AGLDRQRRELMAVVGDTDRLDRHVCVAGDLG-VHRHEVVLAGELHAVAGEIDEGDGIGPR 256
           +GL  Q   +  +V  TD ++ +   +G L   + + VV   E   V  E+D+G  I  R
Sbjct: 126 SGLSDQVDRMTCIVPITDPVEYYYRASGLLNQPNVYYVVPTPEPLEVIAELDDGTLIDVR 185

Query: 257 LLHLLDEIAERFAQRFAVEVACADHVEAGGLQGLRDQAGIVRG 299
            +HL  E+AER+ ++  +  A    +    L  LR+   IV G
Sbjct: 186 HIHLHPELAERYVRQLRLSQAALPQLTRVTLDALREADAIVLG 228


>ref|ZP_06163651.1| PTS system beta-glucoside-specific EIIBCA component [Actinomyces
           sp. oral taxon 848 str. F0332]
 gb|EEZ77042.1| PTS system beta-glucoside-specific EIIBCA component [Actinomyces
           sp. oral taxon 848 str. F0332]
          Length = 737

 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 4/88 (4%)

Query: 233 EVVLAGEL-HAVAGEIDEGDGIGPRLLHLLDEIAERFAQRFAVEVACADHVEAGGLQGLR 291
           EVV+  E  HA+A ++D G  I   LLHL     E     F + V+  D V AG   G  
Sbjct: 55  EVVMVAETEHAIAFKMDSGLEI---LLHLGINTVELKGGPFHLNVSAGDRVRAGETIGTM 111

Query: 292 DQAGIVRGGLQRAGLMGAVADDECEALL 319
           D AGI   G +   ++     DEC + L
Sbjct: 112 DLAGIAAAGKKTESVLVFTNGDECLSSL 139


>ref|ZP_03978293.1| dimethyladenosine transferase [Corynebacterium lipophiloflavum DSM
           44291]
 gb|EEI17630.1| dimethyladenosine transferase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 284

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 26  GDGLAPRRHDRAHAPRQRI----VRIGLQVVLIALQRVALERRGVGILRREIADRLGAQP 81
            D L  RR D +HAP   +      + + V+L  L+     RR + ++++E+ADRL A+P
Sbjct: 107 ADALRVRRSDVSHAPTALVANLPYNVSVPVLLHLLEEFPTIRRVLVMVQKEVADRLAAEP 166

Query: 82  G 82
           G
Sbjct: 167 G 167