BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0127.0043.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772794.1| hypothetical protein bll6154 [Bradyrhizobium ja... 570 e-161 ref|YP_001238157.1| hypothetical protein BBta_2064 [Bradyrhizobi... 458 e-127 ref|YP_001238155.1| hypothetical protein BBta_2062 [Bradyrhizobi... 456 e-126 ref|YP_001238154.1| hypothetical protein BBta_2061 [Bradyrhizobi... 454 e-125 ref|YP_001203862.1| putative signal peptide [Bradyrhizobium sp. ... 430 e-118 >ref|NP_772794.1| hypothetical protein bll6154 [Bradyrhizobium japonicum USDA 110] dbj|BAC51419.1| bll6154 [Bradyrhizobium japonicum USDA 110] Length = 368 Score = 570 bits (1470), Expect = e-161, Method: Compositional matrix adjust. Identities = 272/347 (78%), Positives = 302/347 (87%), Gaps = 3/347 (0%) Query: 19 VASAADLPAKSTPPP-ELPFFLIVDNRVTFSWMPNGTDPGMYSVNPDGTINGKTAKQVYS 77 +A AADLP K+ P +LPFFL++DNRVTFSWMP GTDPGM+SV PDG+ING TAKQVYS Sbjct: 23 LAQAADLPVKAAKKPADLPFFLVIDNRVTFSWMPKGTDPGMWSVRPDGSINGTTAKQVYS 82 Query: 78 FTHFDAWVYGTNFFTISMFKSGHNDPANPCVSPGVTITGGAANCAGTTDVYGLVRSTFGW 137 FTHFD W YGTNFFTISMFKSGHNDPA+PCV+PGV I G A++CAG T++YGL RSTFGW Sbjct: 83 FTHFDLWAYGTNFFTISMFKSGHNDPASPCVAPGVNIGGTASDCAGATEIYGLFRSTFGW 142 Query: 138 NELFNTKAFSVGPLRNVSFEVGLDAEVQNTFFSPAKRDVVGGLQFAFDLPYKGYFNLAPL 197 NE+FNTKAF++GPL N+SFEVG+DA +NTF +PAKRDVV GLQFAFDLPYKGY N+APL Sbjct: 143 NEIFNTKAFTMGPLHNISFEVGMDANTENTFLAPAKRDVVAGLQFAFDLPYKGYINVAPL 202 Query: 198 AYWEFS-HNGFTQCAFFPGANVPGVTCNSDGNVSYHPTWAVETNYYMDLGFLPENIQFWS 256 YWEFS HN FTQC F G V GVTCNSDGNVSY+PTWAVE NYYMDLGFLP N+QFWS Sbjct: 203 MYWEFSNHNAFTQCGLF-GPGVAGVTCNSDGNVSYNPTWAVEINYYMDLGFLPPNMQFWS 261 Query: 257 ISGRAAWYGPKGDSTGLPFLSGSGRFSTATKIEFNSEPIRLTFDASKALYGPKYSHFVDL 316 ISGRA WYGPKGDS GLP LSG+G FST +K E NSEPIRLTFDASKA++G KYSHFVDL Sbjct: 262 ISGRAGWYGPKGDSNGLPALSGTGIFSTKSKTELNSEPIRLTFDASKAVWGDKYSHFVDL 321 Query: 317 WVAYRYWQNKFGNDHNAAPGVCTVAATGQSTSTCTESTIYGGITMKF 363 WVAYRYWQNKFG DHNA GVCTVAATGQST +CTEST+YGGIT+KF Sbjct: 322 WVAYRYWQNKFGLDHNAMAGVCTVAATGQSTKSCTESTVYGGITVKF 368 >ref|YP_001238157.1| hypothetical protein BBta_2064 [Bradyrhizobium sp. BTAi1] gb|ABQ34251.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 364 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 239/380 (62%), Positives = 272/380 (71%), Gaps = 33/380 (8%) Query: 1 MSFR-----CYALAAVFTLELAGVASAADLPAK--STPPPELPFFLIVDNRVTFSWMPNG 53 MSFR + L A T L G A AADLPAK P ELPFFL+VDNRVTFSWMP G Sbjct: 1 MSFRKFITTAFVLGAGATAAL-GQAGAADLPAKIAKKAPAELPFFLLVDNRVTFSWMPKG 59 Query: 54 TDPGMYSVNPDGTINGKTAKQVYSFTHFDAWVYGTNFFTISMFKSGHNDPANPCVSPGVT 113 TDPG++SV PDG+I G TA+Q YSFTHFD W YGTNFFTIS+FKS HNDPANPC + GV Sbjct: 60 TDPGVFSVRPDGSIKGTTAQQGYSFTHFDIWQYGTNFFTISLFKSDHNDPANPCTNAGVI 119 Query: 114 ITGGA-----ANCAGTTDVYGLVRSTFGWNELFNTKAFSVGPLRNVSFEVGLDAEVQNTF 168 G A C G T++YG+ RST GWN++FNT AF++GPLRN+SFEVG+DA QNT+ Sbjct: 120 FNPGTGVATPATCEGATEIYGVFRSTLGWNQIFNTNAFTMGPLRNISFEVGMDANSQNTY 179 Query: 169 FSPAKRDVVGGLQFAFDLPYKGYFNLAPLAYWEF-SHNGFTQCAF---FPGANVPGVTCN 224 SPAKR VV G+QF FDLPYKGYFN APL Y+EF + N FTQC P A VPGV C Sbjct: 180 VSPAKRSVVAGVQFEFDLPYKGYFNAAPLLYYEFYNRNAFTQCGAGWQLPAAAVPGVNCL 239 Query: 225 SDGNVSYHPTWAVETNYYMDLGFLPENIQFWSISGRAAWYGPKGDSTG-LPFLSGSGRFS 283 +DGN S++PTWA+E NYYMDLGFLP N+QFWSISGRA WYG KG+ LP Sbjct: 240 ADGNRSFNPTWALELNYYMDLGFLPPNMQFWSISGRAGWYGEKGNENNPLP--------G 291 Query: 284 TATKIEFNSEPIRLTFDASKALYGPKYSHFVDLWVAYRYWQNKFGNDHNAAPGVCTVAAT 343 T T IEFNSEPIRLTFDASKA G KYSHFVD+WVAY YWQNKFG D V+A Sbjct: 292 TKTAIEFNSEPIRLTFDASKAFMGDKYSHFVDVWVAYHYWQNKFGLDRK-------VSAV 344 Query: 344 GQSTSTCTESTIYGGITMKF 363 + STCTE T+Y G+T+KF Sbjct: 345 CRGNSTCTEETLYAGVTVKF 364 >ref|YP_001238155.1| hypothetical protein BBta_2062 [Bradyrhizobium sp. BTAi1] gb|ABQ34249.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 364 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 232/352 (65%), Positives = 264/352 (75%), Gaps = 27/352 (7%) Query: 24 DLPAKSTP--PPELPFFLIVDNRVTFSWMPNGTDPGMYSVNPDGTINGKTAKQVYSFTHF 81 DLP K+ P +LPFFL+VDNRV+FSWMP GTDPG++SV P+G+ING TAKQVYSFTHF Sbjct: 28 DLPGKAAKKAPADLPFFLVVDNRVSFSWMPKGTDPGVFSVRPNGSINGTTAKQVYSFTHF 87 Query: 82 DAWVYGTNFFTISMFKSGHNDPANPCVSPGV-----TITGGAANCAGTTDVYGLVRSTFG 136 D W YG NF TISMFKS NDPANPC + GV T G A C G T++YGL RSTFG Sbjct: 88 DIWQYGANFLTISMFKSDQNDPANPCTNAGVIFNPGTGIGTRATCEGATEIYGLFRSTFG 147 Query: 137 WNELFNTKAFSVGPLRNVSFEVGLDAEVQNTFFSPAKRDVVGGLQFAFDLPYKGYFNLAP 196 WN++FNTKAF++GPL N+SFEVG+DA QNT+ +PAKR VV GLQFAFDLPYKGYFN AP Sbjct: 148 WNQIFNTKAFTMGPLNNISFEVGMDAGTQNTYVAPAKRSVVAGLQFAFDLPYKGYFNAAP 207 Query: 197 LAYWEF-SHNGFTQCAF---FPGANVPGVTCNSDGNVSYHPTWAVETNYYMDLGFLPENI 252 L Y+EF + N FTQC P A VPGV C +DGN S++PTWA+E NYYMDLGFLP N+ Sbjct: 208 LLYYEFYNRNAFTQCGAGWQLPAAAVPGVNCLTDGNRSFNPTWALELNYYMDLGFLPPNM 267 Query: 253 QFWSISGRAAWYGPKGDSTG-LPFLSGSGRFSTATKIEFNSEPIRLTFDASKALYGPKYS 311 QFWSISGRAAWYG KG+ LP T T IEFNSEPIRLTFDASKA G KYS Sbjct: 268 QFWSISGRAAWYGEKGNENNPLP--------GTKTAIEFNSEPIRLTFDASKAFMGDKYS 319 Query: 312 HFVDLWVAYRYWQNKFGNDHNAAPGVCTVAATGQSTSTCTESTIYGGITMKF 363 HFVD+WVAYRYWQNKFG DH + VC STCTE T+YGG+T+KF Sbjct: 320 HFVDVWVAYRYWQNKFGLDHKVSR-VCV------GNSTCTEETVYGGVTVKF 364 >ref|YP_001238154.1| hypothetical protein BBta_2061 [Bradyrhizobium sp. BTAi1] gb|ABQ34248.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 364 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 227/352 (64%), Positives = 265/352 (75%), Gaps = 27/352 (7%) Query: 24 DLPAKSTP--PPELPFFLIVDNRVTFSWMPNGTDPGMYSVNPDGTINGKTAKQVYSFTHF 81 DLPAK+ P +LPFFL+VDNRV+FSWMP GTDPG++SV P+G+IN TAKQVYSF+HF Sbjct: 28 DLPAKAAKKAPVDLPFFLVVDNRVSFSWMPKGTDPGVFSVRPNGSINSTTAKQVYSFSHF 87 Query: 82 DAWVYGTNFFTISMFKSGHNDPANPCVSPGVTITGGA-----ANCAGTTDVYGLVRSTFG 136 D W YGTNFFTISMFKS HNDPANPC + GV G A C G T++YGL RSTFG Sbjct: 88 DVWQYGTNFFTISMFKSDHNDPANPCTNAGVIFNPGTGIATPATCEGATEIYGLFRSTFG 147 Query: 137 WNELFNTKAFSVGPLRNVSFEVGLDAEVQNTFFSPAKRDVVGGLQFAFDLPYKGYFNLAP 196 WN++FNT AF++GPL N+SFEVG+DA +N + SPAKR +V GLQFAFDLPYKGYFN AP Sbjct: 148 WNQIFNTNAFTMGPLHNISFEVGMDANTENNYLSPAKRSMVAGLQFAFDLPYKGYFNAAP 207 Query: 197 LAYWEF-SHNGFTQCAF---FPGANVPGVTCNSDGNVSYHPTWAVETNYYMDLGFLPENI 252 L Y+EF + N FTQC P A VPGV C +DGN S++PTWA+E NYYMDLGFLP N+ Sbjct: 208 LLYYEFYNRNAFTQCGAGWQLPAAAVPGVNCLTDGNRSFNPTWALELNYYMDLGFLPPNM 267 Query: 253 QFWSISGRAAWYGPKG-DSTGLPFLSGSGRFSTATKIEFNSEPIRLTFDASKALYGPKYS 311 QFWSISGRA WYG KG +++ LP T T IEFNSEPIRLTFDASKA G KYS Sbjct: 268 QFWSISGRAGWYGEKGNENSPLP--------GTKTAIEFNSEPIRLTFDASKAFMGDKYS 319 Query: 312 HFVDLWVAYRYWQNKFGNDHNAAPGVCTVAATGQSTSTCTESTIYGGITMKF 363 HFVD+WVAYRYWQNKFG DH + G C ++CTE T+YGG+T+KF Sbjct: 320 HFVDVWVAYRYWQNKFGLDHKTS-GACV------GNASCTEETVYGGVTVKF 364 >ref|YP_001203862.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL75625.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 376 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 225/360 (62%), Positives = 268/360 (74%), Gaps = 22/360 (6%) Query: 18 GVASAADLPAKSTPPP---ELPFFLIVDNRVTFSWMPNGTDPGMYSVNPDGTINGKTAKQ 74 G A AADL AK+ +LPFFL+VDNRV+FS++ N PG +S N N TAKQ Sbjct: 25 GTAGAADLQAKAIAKKAPADLPFFLVVDNRVSFSYIFNARQPGAWSGNAAAGFNANTAKQ 84 Query: 75 VYSFTHFDAWVYGTNFFTISMFKSGHNDPANPCVSPGVTITGGA------ANCAGTTDVY 128 VYSFTHFD W YGTNFFTIS+FKS HNDPA PC G ++ A A+CAG T++Y Sbjct: 85 VYSFTHFDVWGYGTNFFTISLFKSDHNDPAGPCTQTGGIVSPNAGFAFTPASCAGATEIY 144 Query: 129 GLVRSTFGWNELFNTKAFSVGPLRNVSFEVGLDAEVQNTFFSPAKRDVVGGLQFAFDLPY 188 GL RSTFGWN++FNTKAF++GPL+N+SFEVG+DA +N +F AKRDVV GLQFAF+LPY Sbjct: 145 GLFRSTFGWNQIFNTKAFTMGPLQNISFEVGMDANTENRYFGAAKRDVVAGLQFAFNLPY 204 Query: 189 KGYFNLAPLAYWEFS-HNGFTQCAFFPGANVPGVTCNSDGNVSYHPTWAVETNYYMDLGF 247 KGYFN+APL YWEF+ HN F+QC G + P C +DGN S+ PTWAVETNYYMDLGF Sbjct: 205 KGYFNVAPLMYWEFANHNSFSQCG--AGWSAP---CIADGNTSFKPTWAVETNYYMDLGF 259 Query: 248 LPENIQFWSISGRAAWYGPKG-DSTGLPFLSGSGRFSTATKIEFNSEPIRLTFDASKALY 306 LPEN+QF+SISGRA WYG KG D+ LP +G + TKIEFNSEPIRLTFDASKA++ Sbjct: 260 LPENMQFFSISGRAGWYGKKGTDTEPLPASVANGVY--PTKIEFNSEPIRLTFDASKAIW 317 Query: 307 GPKYSHFVDLWVAYRYWQNKFGNDHNAAPGVCTVAATGQ---STSTCTESTIYGGITMKF 363 G K SH +D+WVAYRYWQNKFG DHN A G C+VA G ST CTES++Y G+T+KF Sbjct: 318 GEKQSHMIDVWVAYRYWQNKFGLDHNNAVG-CSVAGAGGTRVSTGACTESSLYSGVTVKF 376