BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0127.0031.p         (121 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001831561.1| peptidase M23 [Beijerinckia indica subsp. in...    53   1e-05
ref|YP_001314667.1| transposase IS66 [Sinorhizobium medicae WSM4...    50   1e-04
ref|YP_001314887.1| transposase IS66 [Sinorhizobium medicae WSM4...    50   1e-04
ref|YP_001314198.1| transposase IS66 [Sinorhizobium medicae WSM4...    50   1e-04
ref|YP_001965512.1| putative transposase [Sinorhizobium meliloti...    50   1e-04

>ref|YP_001831561.1| peptidase M23 [Beijerinckia indica subsp. indica ATCC 9039]
 gb|ACB94072.1| Peptidase M23 [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 695

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 6/83 (7%)

Query: 24  GEPPLTGEGK---LPDRRAVSFRWMAGTILIGSAAVALLAGALRGAFGDHARFAAAPVVS 80
            EP +  +G+   + DRR VS RW+AGTIL G +   L+  A+  AF   + FA AP+++
Sbjct: 30  NEPAIDTDGEQHDIFDRRQVSLRWLAGTILTGLSGAGLIGAAIYAAFDHQSHFAEAPMLA 89

Query: 81  LP---RFAGQVVDEARRGDRLXQ 100
            P     A +     R+GDRL +
Sbjct: 90  APPHRETAQESGINGRKGDRLVK 112


>ref|YP_001314667.1| transposase IS66 [Sinorhizobium medicae WSM419]
 gb|ABR64734.1| transposase IS66 [Sinorhizobium medicae WSM419]
          Length = 290

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)

Query: 81  LPRFAGQVVDEARRGDRLXQFWAHAMDDRPWGGPSPPAVAH 121
           LPR      D  R+  +L Q WA A+DDRPW GP+PPAVA+
Sbjct: 11  LPRL-----DPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAY 46


>ref|YP_001314887.1| transposase IS66 [Sinorhizobium medicae WSM419]
 gb|ABR64954.1| transposase IS66 [Sinorhizobium medicae WSM419]
          Length = 524

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)

Query: 81  LPRFAGQVVDEARRGDRLXQFWAHAMDDRPWGGPSPPAVAH 121
           LPR      D  R+  +L Q WA A+DDRPW GP+PPAVA+
Sbjct: 245 LPRL-----DPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAY 280


>ref|YP_001314198.1| transposase IS66 [Sinorhizobium medicae WSM419]
 ref|YP_001326909.1| transposase IS66 [Sinorhizobium medicae WSM419]
 gb|ABR60074.1| transposase IS66 [Sinorhizobium medicae WSM419]
 gb|ABR64265.1| transposase IS66 [Sinorhizobium medicae WSM419]
          Length = 290

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)

Query: 81  LPRFAGQVVDEARRGDRLXQFWAHAMDDRPWGGPSPPAVAH 121
           LPR      D  R+  +L Q WA A+DDRPW GP+PPAVA+
Sbjct: 11  LPRL-----DPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAY 46


>ref|YP_001965512.1| putative transposase [Sinorhizobium meliloti]
 gb|ABN47019.1| putative transposase [Sinorhizobium meliloti SM11]
          Length = 524

 Score = 49.7 bits (117), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 5/41 (12%)

Query: 81  LPRFAGQVVDEARRGDRLXQFWAHAMDDRPWGGPSPPAVAH 121
           LPR      D  R+  +L Q WA A+DDRPW GP+PPAVA+
Sbjct: 245 LPRL-----DPGRKRTKLCQLWAQAIDDRPWNGPAPPAVAY 280