BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0127.0007.p         (106 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01046668.1| putative transposase [Nitrobacter sp. Nb-311A...   125   2e-27
ref|ZP_01047611.1| putative transposase [Nitrobacter sp. Nb-311A...   124   4e-27
ref|ZP_01048453.1| putative transposase [Nitrobacter sp. Nb-311A...   124   4e-27
ref|ZP_08631238.1| Putative transposase [Acidiphilium sp. PM] >g...   114   6e-24
ref|ZP_01047780.1| putative transposase [Nitrobacter sp. Nb-311A...   110   1e-22

>ref|ZP_01046668.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ35221.1| putative transposase [Nitrobacter sp. Nb-311A]
          Length = 253

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 77/105 (73%)

Query: 1   VFASDRKAERPATHLAHFKGLLHIDGYAGFGRLTDAGNVILAACWAHTGHKFYEVAQSED 60
           +++ DRKAERPA HLA+F G++ +DGY GF RL D G + LAACWAH   KFYEV Q+  
Sbjct: 25  LYSPDRKAERPAAHLANFSGIVQVDGYPGFDRLRDGGTIQLAACWAHARRKFYEVQQATA 84

Query: 61  MPVSHEALRRIASLYALEAQLRGQSPAHRLAMRRAFAKPVIDSLR 105
            PV+ EALRRIA LY +EA +RGQ+   R +MRR+ + P++ +++
Sbjct: 85  SPVATEALRRIAELYVIEAAIRGQTAEARQSMRRSKSLPLVTAMK 129


>ref|ZP_01047611.1| putative transposase [Nitrobacter sp. Nb-311A]
 ref|ZP_01048623.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ33406.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ34371.1| putative transposase [Nitrobacter sp. Nb-311A]
          Length = 512

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 77/105 (73%)

Query: 1   VFASDRKAERPATHLAHFKGLLHIDGYAGFGRLTDAGNVILAACWAHTGHKFYEVAQSED 60
           +++ DRKAERPA HLA+F G++ +DGY GF RL D G + LAACWAH   KFYEV Q+  
Sbjct: 285 LYSPDRKAERPAAHLANFSGIVQVDGYPGFDRLRDGGTIQLAACWAHARRKFYEVQQATA 344

Query: 61  MPVSHEALRRIASLYALEAQLRGQSPAHRLAMRRAFAKPVIDSLR 105
            PV+ EALRR+A LY +EA +RGQ+   R +MRR+ + P++ +++
Sbjct: 345 SPVATEALRRVAELYVIEAAIRGQTAEARQSMRRSKSLPLVTAMK 389


>ref|ZP_01048453.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ33572.1| putative transposase [Nitrobacter sp. Nb-311A]
          Length = 513

 Score =  124 bits (311), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 77/105 (73%)

Query: 1   VFASDRKAERPATHLAHFKGLLHIDGYAGFGRLTDAGNVILAACWAHTGHKFYEVAQSED 60
           +++ DRKAERPA HLA+F G++ +DGY GF RL D G + LAACWAH   KFYEV Q+  
Sbjct: 285 LYSPDRKAERPAAHLANFSGIVQVDGYPGFDRLRDGGTIQLAACWAHARRKFYEVQQATA 344

Query: 61  MPVSHEALRRIASLYALEAQLRGQSPAHRLAMRRAFAKPVIDSLR 105
            PV+ EALRR+A LY +EA +RGQ+   R +MRR+ + P++ +++
Sbjct: 345 SPVATEALRRVAELYVIEAAIRGQTAEARQSMRRSKSLPLVTAMK 389


>ref|ZP_08631238.1| Putative transposase [Acidiphilium sp. PM]
 gb|EGO96972.1| Putative transposase [Acidiphilium sp. PM]
          Length = 530

 Score =  114 bits (285), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 77/108 (71%), Gaps = 3/108 (2%)

Query: 1   VFASDRKAERPATHLAHFKGLLHIDGYAGFGRLTDAGN---VILAACWAHTGHKFYEVAQ 57
           V+A+DRK ERPA H++ F+G+L +DGYAGFG++  A +   + LA CW H    FYE  Q
Sbjct: 295 VYATDRKGERPAAHMSSFRGILQVDGYAGFGKVVKARDDDALALAFCWTHARRGFYEFHQ 354

Query: 58  SEDMPVSHEALRRIASLYALEAQLRGQSPAHRLAMRRAFAKPVIDSLR 105
           +   P++ EAL RIA LYA+EA++RGQS   RLA+RR  ++P I+++R
Sbjct: 355 ATQSPIAAEALARIARLYAIEAEIRGQSAERRLAVRRERSRPEIEAMR 402


>ref|ZP_01047780.1| putative transposase [Nitrobacter sp. Nb-311A]
 ref|ZP_01047794.1| putative transposase [Nitrobacter sp. Nb-311A]
 ref|ZP_01047834.1| putative transposase [Nitrobacter sp. Nb-311A]
 ref|ZP_01048013.1| putative transposase [Nitrobacter sp. Nb-311A]
 ref|ZP_01048208.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ33868.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ33987.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ34204.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ34218.1| putative transposase [Nitrobacter sp. Nb-311A]
 gb|EAQ34258.1| putative transposase [Nitrobacter sp. Nb-311A]
          Length = 510

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 73/104 (70%)

Query: 1   VFASDRKAERPATHLAHFKGLLHIDGYAGFGRLTDAGNVILAACWAHTGHKFYEVAQSED 60
           ++A DRKAERP  HLA F G+L +DGYAG+  L + G+V LA CWAH   +FYE+A +  
Sbjct: 279 LYAPDRKAERPIAHLAGFTGILQVDGYAGYRALAERGDVRLAFCWAHVRRRFYELAVAGP 338

Query: 61  MPVSHEALRRIASLYALEAQLRGQSPAHRLAMRRAFAKPVIDSL 104
            P++ EAL+RI  LYA+E Q RG+    R A+R+  ++P++++L
Sbjct: 339 APIASEALKRIVDLYAVETQCRGRCADERRALRQEKSRPILEAL 382