BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0127.0005.p         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08627045.1| lytic transglycosylase [Bradyrhizobiaceae bac...   142   1e-32
ref|YP_001417769.1| lytic transglycosylase catalytic [Xanthobact...   127   5e-28
ref|ZP_08664721.1| lytic transglycosylase catalytic [Paracoccus ...   123   1e-26
ref|YP_001685447.1| lytic transglycosylase catalytic subunit [Ca...   122   2e-26
ref|YP_001925772.1| lytic transglycosylase [Methylobacterium pop...   122   2e-26

>ref|ZP_08627045.1| lytic transglycosylase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP10325.1| lytic transglycosylase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 158

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/152 (50%), Positives = 97/152 (63%)

Query: 1   MPATWAELRERYHLGSDPYDPRNNILAGTAYLGELLDRYGSPGAFAAYNAGPTCYDGHLA 60
           MP TW ELR RY LG+DP DPR+NILAGTAYL EL DRYGSPG+ AAYNAGP  Y+ HLA
Sbjct: 7   MPKTWEELRLRYDLGNDPCDPRDNILAGTAYLRELRDRYGSPGSLAAYNAGPARYEEHLA 66

Query: 61  GGPLSDETRVYVAKLANLLGIELPATWAASQQPSAAATLFVGRIDPVKAGDRKPAFLSST 120
           G PL  ET+ Y+ KL  ++G ++  + A      +A +LF+ R +  KA  R        
Sbjct: 67  GRPLPAETQAYLQKLTPVIGGDIATSSALESLRPSAGSLFIVRSESSKAAGRLQLVRPPN 126

Query: 121 GATTAISSRDVLQMVPTATDVFVARSNSGTAR 152
            A  A S RD+  +VP A  +FVARS++G  R
Sbjct: 127 PAPMAASIRDISAIVPQARGLFVARSDTGGPR 158


>ref|YP_001417769.1| lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2]
 gb|ABS68112.1| Lytic transglycosylase catalytic [Xanthobacter autotrophicus Py2]
          Length = 258

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 93/154 (60%), Gaps = 9/154 (5%)

Query: 1   MPATWAELRERYHLGSDPYDPRNNILAGTAYLGELLDRYGSPGAFAAYNAGPTCYDGHLA 60
           MP TW ELR R+ LG DPY PR+NILAG AYL E+ DRYGSPG  AAYNAGP  Y+ +LA
Sbjct: 102 MPHTWTELRTRHRLGRDPYSPRDNILAGAAYLREMYDRYGSPGFLAAYNAGPGRYEEYLA 161

Query: 61  GGPLSDETRVYVAKLANLLG---IELPATWAASQQPSA--AATLFVGRIDPVKAGD--RK 113
           G PL  ETR YVA L  L G   +  P   A +  P A   A LFV RI+ + A D  + 
Sbjct: 162 GRPLPAETRAYVAALVPLFGGGDLPSPVAVAVADPPQAWTRAPLFVARIERISAADPAQT 221

Query: 114 PAFLSSTGATTAISSRDVLQMVPTATDVFVARSN 147
           P       AT  +  R+V  ++P ++ +FVAR +
Sbjct: 222 PHHPDDAPATPPV--REVSAIMPQSSGLFVARPD 253


>ref|ZP_08664721.1| lytic transglycosylase catalytic [Paracoccus sp. TRP]
          Length = 261

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/165 (47%), Positives = 95/165 (57%), Gaps = 24/165 (14%)

Query: 1   MPATWAELRERYHLGSDPYDPRNNILAGTAYLGELLDRYGSPGAFAAYNAGPTCYDGHLA 60
           MPATWAELR RY LG DP+DPR+NI+AGTAYL E+ DRYGSPG  AAYNAGP  Y+ +LA
Sbjct: 102 MPATWAELRVRYGLGRDPFDPRDNIIAGTAYLREMYDRYGSPGFLAAYNAGPGRYEEYLA 161

Query: 61  GGPLSDETRVYVAKLANLLGIELPATWAASQQPSAAATLFVGRIDPVKAGDRKPAFLSST 120
           G PL  ETR YVA LA L+G        A+  P A  T+ V   DP  A  R P F++ +
Sbjct: 162 GRPLPAETRAYVATLAPLIG-------GANLSPPAPGTVTVAAADP-HAWRRAPLFVTPS 213

Query: 121 G----------------ATTAISSRDVLQMVPTATDVFVARSNSG 149
                            A TA SS +       +  +FVAR++ G
Sbjct: 214 AHGLDARKTISEPQENDARTAPSSGEGPTNSVQSGSIFVARADDG 258


>ref|YP_001685447.1| lytic transglycosylase catalytic subunit [Caulobacter sp. K31]
 gb|ABZ72949.1| Lytic transglycosylase catalytic [Caulobacter sp. K31]
          Length = 310

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/153 (51%), Positives = 94/153 (61%), Gaps = 7/153 (4%)

Query: 1   MPATWAELRERYHLGSDPYDPRNNILAGTAYLGELLDRYGSPGAFAAYNAGPTCYDGHLA 60
           MPATWA+LR R+ LG +PYDPR+NILAG AYL EL DRYGSPG  AAYNAGP  Y+ ++A
Sbjct: 154 MPATWADLRARHRLGDNPYDPRDNILAGAAYLRELHDRYGSPGFLAAYNAGPGRYEEYVA 213

Query: 61  GG-PLSDETRVYVAKLANLLG---IELPATWAASQQPSA--AATLFVGRIDPVKAGDRKP 114
            G  L  ETR YVA L  L+G      P T  A+  P A   A LF+GR + + A D   
Sbjct: 214 TGRALPAETRAYVAVLTPLVGDGATTGPIT-VATVDPLAWVRAPLFIGRNERIAAADPVQ 272

Query: 115 AFLSSTGATTAISSRDVLQMVPTATDVFVARSN 147
              SS  A TAI  RD   + P +  +FVARS 
Sbjct: 273 PDRSSIDAPTAIPVRDPAAIAPQSDGLFVARSE 305


>ref|YP_001925772.1| lytic transglycosylase [Methylobacterium populi BJ001]
 gb|ACB81237.1| Lytic transglycosylase catalytic [Methylobacterium populi BJ001]
          Length = 257

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/156 (47%), Positives = 96/156 (61%), Gaps = 4/156 (2%)

Query: 1   MPATWAELRERYHLGSDPYDPRNNILAGTAYLGELLDRYGSPGAFAAYNAGPTCYDGHLA 60
           MP TWA LR R+ LG+DPYDP +NI+AG AY+ EL DRYGSPG  AAYNAGP  Y+  L 
Sbjct: 102 MPETWAGLRARHRLGADPYDPHDNIIAGAAYIRELSDRYGSPGWIAAYNAGPGRYEDSLD 161

Query: 61  GGPLSDETRVYVAKLANLLGIELPAT--WAASQQPSA--AATLFVGRIDPVKAGDRKPAF 116
           G PL  ETR Y+A +A  +    PA+    A+  P A   A LFV + +   A D  P  
Sbjct: 162 GRPLPAETRAYLAIIAPSVSSGDPASPVIVAAADPLAWTRAPLFVAQSERSAAADPLPVE 221

Query: 117 LSSTGATTAISSRDVLQMVPTATDVFVARSNSGTAR 152
            +S+ A+   + RDV  +VP +  +FVAR++  TAR
Sbjct: 222 RASSDASATPAVRDVSAIVPQSGGLFVARADDRTAR 257