BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0127.0003.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08627047.1| hypothetical protein CSIRO_0104 [Bradyrhizobi...   287   3e-76
ref|YP_001237614.1| hypothetical protein BBta_1489 [Bradyrhizobi...   249   7e-65
ref|YP_533752.1| hypothetical protein RPC_3907 [Rhodopseudomonas...   243   5e-63
ref|YP_782937.1| hypothetical protein RPE_4031 [Rhodopseudomonas...   238   3e-61
ref|YP_001239355.1| hypothetical protein BBta_3348 [Bradyrhizobi...   225   2e-57

>ref|ZP_08627047.1| hypothetical protein CSIRO_0104 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP10327.1| hypothetical protein CSIRO_0104 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 154

 Score =  287 bits (735), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 135/154 (87%), Positives = 144/154 (93%)

Query: 1   MSDLTEVEVLWLEKRIENRVRFGRIVKERKLDRHRRILSFAAGGIFAFVRWTSNDFGTVI 60
           MSDLTEVEVLWLEKRIENR+RFGR  +E+K+DRHRR+LSFA G IFAFVRWTSNDFGT+I
Sbjct: 1   MSDLTEVEVLWLEKRIENRIRFGRPAEEKKIDRHRRVLSFAPGSIFAFVRWTSNDFGTII 60

Query: 61  SRIDILRAVAAGQRCSTVPYVKPGGEILLRLSGWPKVERALQMIDAIDALSIDPADVAPD 120
           SRIDILRAV  GQRCSTVPYVKPGGEILLRLS WPKVER LQM+DAI+AL IDPADVAPD
Sbjct: 61  SRIDILRAVRPGQRCSTVPYVKPGGEILLRLSSWPKVERVLQMVDAIEALGIDPADVAPD 120

Query: 121 HWHHVHNRLSVNENPRPYTKGRHQAWLHRQRVMR 154
           HWHH+HNRLSVNENPRPYTK RHQAWLHRQRVMR
Sbjct: 121 HWHHIHNRLSVNENPRPYTKARHQAWLHRQRVMR 154


>ref|YP_001237614.1| hypothetical protein BBta_1489 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33708.1| hypothetical protein BBta_1489 [Bradyrhizobium sp. BTAi1]
          Length = 171

 Score =  249 bits (637), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 116/153 (75%), Positives = 134/153 (87%)

Query: 1   MSDLTEVEVLWLEKRIENRVRFGRIVKERKLDRHRRILSFAAGGIFAFVRWTSNDFGTVI 60
           + DLT VE+LWLEKRIENRVRFGR V E+ +DR+RR+LSFA G IFAFVRWTSNDFGT++
Sbjct: 18  VGDLTTVEILWLEKRIENRVRFGRSVVEKIIDRNRRVLSFAPGSIFAFVRWTSNDFGTML 77

Query: 61  SRIDILRAVAAGQRCSTVPYVKPGGEILLRLSGWPKVERALQMIDAIDALSIDPADVAPD 120
           SRIDILRA   GQR STVP++ PGGE LLRLSGWPKVER LQMID ++AL +DPAD AP+
Sbjct: 78  SRIDILRAATPGQRYSTVPWITPGGESLLRLSGWPKVERVLQMIDIVEALDVDPADAAPE 137

Query: 121 HWHHVHNRLSVNENPRPYTKGRHQAWLHRQRVM 153
           +WHHVHNR+SVNE PRPYT+ RHQAWLHR+RVM
Sbjct: 138 YWHHVHNRVSVNEAPRPYTRSRHQAWLHRRRVM 170


>ref|YP_533752.1| hypothetical protein RPC_3907 [Rhodopseudomonas palustris BisB18]
 gb|ABD89433.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 154

 Score =  243 bits (621), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 113/152 (74%), Positives = 131/152 (86%)

Query: 1   MSDLTEVEVLWLEKRIENRVRFGRIVKERKLDRHRRILSFAAGGIFAFVRWTSNDFGTVI 60
           M +LT VE+LWLEKRIEN +RFG   +E+ LDR RRILSFA G IFAFVRWTSNDFGTV+
Sbjct: 1   MDNLTHVELLWLEKRIENWIRFGHAAQEQILDRKRRILSFAPGSIFAFVRWTSNDFGTVV 60

Query: 61  SRIDILRAVAAGQRCSTVPYVKPGGEILLRLSGWPKVERALQMIDAIDALSIDPADVAPD 120
           SRIDI+RAV  GQRC+TVP+V+PGGEILLRL+GWPKVER LQ +DA++AL  DPAD APD
Sbjct: 61  SRIDIVRAVPPGQRCTTVPFVRPGGEILLRLAGWPKVERVLQFVDAVEALGFDPADAAPD 120

Query: 121 HWHHVHNRLSVNENPRPYTKGRHQAWLHRQRV 152
           +WHHVHNRLSVNE PR YT+ RHQAWL R+R+
Sbjct: 121 YWHHVHNRLSVNEVPRAYTRTRHQAWLQRRRI 152


>ref|YP_782937.1| hypothetical protein RPE_4031 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07957.1| hypothetical protein RPE_4031 [Rhodopseudomonas palustris BisA53]
          Length = 154

 Score =  238 bits (606), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 111/152 (73%), Positives = 130/152 (85%)

Query: 1   MSDLTEVEVLWLEKRIENRVRFGRIVKERKLDRHRRILSFAAGGIFAFVRWTSNDFGTVI 60
           M +L  VE+LWLEKRIEN +RFG   +E+ LDR RRILSFA G IFAFVRWTSNDFGTV+
Sbjct: 1   MDNLMHVELLWLEKRIENWIRFGHAAQEQILDRKRRILSFAPGSIFAFVRWTSNDFGTVV 60

Query: 61  SRIDILRAVAAGQRCSTVPYVKPGGEILLRLSGWPKVERALQMIDAIDALSIDPADVAPD 120
           SRIDI+RAV  GQRC+TVP+V+PGGEILLRL+GWPKVER LQ++DA++AL  DPA  APD
Sbjct: 61  SRIDIVRAVPPGQRCTTVPFVRPGGEILLRLAGWPKVERVLQIVDAVEALGFDPAAAAPD 120

Query: 121 HWHHVHNRLSVNENPRPYTKGRHQAWLHRQRV 152
           +WHHVHNRLSVNE PR YT+ RHQAWL R+R+
Sbjct: 121 YWHHVHNRLSVNEVPRAYTRTRHQAWLLRRRI 152


>ref|YP_001239355.1| hypothetical protein BBta_3348 [Bradyrhizobium sp. BTAi1]
 gb|ABQ35449.1| hypothetical protein BBta_3348 [Bradyrhizobium sp. BTAi1]
          Length = 167

 Score =  225 bits (574), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 106/154 (68%), Positives = 128/154 (83%)

Query: 1   MSDLTEVEVLWLEKRIENRVRFGRIVKERKLDRHRRILSFAAGGIFAFVRWTSNDFGTVI 60
           MSDLT+VE+LWLEKRIEN +RFG  V+E  +D+ RR+LSFA G IFAFVRW SNDFGTV+
Sbjct: 14  MSDLTQVELLWLEKRIENWIRFGHAVEETIIDKRRRVLSFAPGAIFAFVRWASNDFGTVV 73

Query: 61  SRIDILRAVAAGQRCSTVPYVKPGGEILLRLSGWPKVERALQMIDAIDALSIDPADVAPD 120
           SRI+I+RAVA GQ  +TVP+V+PGGEILLRL+GW +VE  LQ ID ++AL IDPA+ APD
Sbjct: 74  SRIEIVRAVAPGQAYTTVPFVRPGGEILLRLAGWSRVEAVLQRIDRVEALGIDPAEAAPD 133

Query: 121 HWHHVHNRLSVNENPRPYTKGRHQAWLHRQRVMR 154
           +W HVHNRLS  + PR YT+GRHQAWLHR+R  R
Sbjct: 134 YWQHVHNRLSAYDVPRDYTRGRHQAWLHRRRFAR 167