BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0125.0007.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767342.1| hypothetical protein bll0702 [Bradyrhizobium ja... 507 e-141 ref|YP_001236411.1| hypothetical protein BBta_0208 [Bradyrhizobi... 495 e-138 ref|YP_001202362.1| hypothetical protein BRADO0145 [Bradyrhizobi... 486 e-135 ref|YP_567301.1| hypothetical protein RPD_0160 [Rhodopseudomonas... 482 e-134 ref|YP_575431.1| hypothetical protein Nham_0070 [Nitrobacter ham... 478 e-133 >ref|NP_767342.1| hypothetical protein bll0702 [Bradyrhizobium japonicum USDA 110] dbj|BAC45967.1| bll0702 [Bradyrhizobium japonicum USDA 110] Length = 327 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 245/288 (85%), Positives = 262/288 (90%), Gaps = 3/288 (1%) Query: 1 MLDTVGKWIAGYLQKEVPGYEPFTPSDPDHLRSIMQPGDVLLVEGNNRISGIIKYLTQST 60 +LD+VGK IA YL KEVPGYEPFTPSDP+HLR +++PGDVLLVEGNNRISGIIKYLTQST Sbjct: 4 VLDSVGKLIAAYLSKEVPGYEPFTPSDPEHLRGVIEPGDVLLVEGNNRISGIIKYLTQST 63 Query: 61 WSHAALFVGPIDGAFEPDGEQHVLIEANIGEGVTSAPLSKYLAYHTRLCRPVGLSFEDRT 120 WSHAAL+VGPI+GA EP GE HVLIEANIGEGVTSAPLSKY YHTR+CRPVGLS EDRT Sbjct: 64 WSHAALYVGPIEGAEEPSGEPHVLIEANIGEGVTSAPLSKYFPYHTRVCRPVGLSHEDRT 123 Query: 121 TVCRYAINRIGFGYDTKNIVDLARYLFPLPIPQRWRRRMIAFGSGDPTKIICSALIAQAF 180 TVCRYAINRIGFGYDTKNIVDL R+LFPLPIPQRWRRRMIA GSGDPTKIICSALIAQAF Sbjct: 124 TVCRYAINRIGFGYDTKNIVDLMRFLFPLPIPQRWRRRMIAIGSGDPTKIICSALIAQAF 183 Query: 181 DAVRYPILPKITRAASRKARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYTALH 240 DAVRYPILPKIT+A SR ARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYT LH Sbjct: 184 DAVRYPILPKITKAGSRAARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYTTLH 243 Query: 241 WADKQKPLQEVAGEFGVFPEHKS-PPLVPEATDEET--ALPAAEMTAE 285 WADKQKPL+EVAG F VFPE S PPLVPEA DEE +PA +++A+ Sbjct: 244 WADKQKPLEEVAGTFSVFPETISAPPLVPEAADEEAPDEIPAEQVSAQ 291 >ref|YP_001236411.1| hypothetical protein BBta_0208 [Bradyrhizobium sp. BTAi1] gb|ABQ32505.1| hypothetical protein BBta_0208 [Bradyrhizobium sp. BTAi1] Length = 326 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 236/281 (83%), Positives = 255/281 (90%), Gaps = 1/281 (0%) Query: 1 MLDTVGKWIAGYLQKEVPGYEPFTPSDPDHLRSIMQPGDVLLVEGNNRISGIIKYLTQST 60 +LD +GK IA YLQKE+PGYEPFTPSDP++LR MQPGDVLLVEGN+RISGIIKYLTQST Sbjct: 4 VLDQIGKLIAAYLQKEIPGYEPFTPSDPEYLRKDMQPGDVLLVEGNSRISGIIKYLTQST 63 Query: 61 WSHAALFVGPIDGAFEPDGEQHVLIEANIGEGVTSAPLSKYLAYHTRLCRPVGLSFEDRT 120 WSHAAL+VGPIDGA EPDGE HVL+EA +G+GV SAPLSKY YHTRLCRPVGL+FEDR Sbjct: 64 WSHAALYVGPIDGAVEPDGEPHVLVEAYVGDGVISAPLSKYFDYHTRLCRPVGLTFEDRH 123 Query: 121 TVCRYAINRIGFGYDTKNIVDLARYLFPLPIPQRWRRRMIAFGSGDPTKIICSALIAQAF 180 TVCRYAINRIGFGYDTKNIVDL RYL PLPIPQRWRRRMIA GSGDPTK+ICSALIAQAF Sbjct: 124 TVCRYAINRIGFGYDTKNIVDLMRYLIPLPIPQRWRRRMIALGSGDPTKMICSALIAQAF 183 Query: 181 DAVRYPILPKITRAASRKARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYTALH 240 DAVRYPILPKITRA SR+A+REILHIRDSSLYMPRDFDISPYFE+VKPTIV+GFDYT LH Sbjct: 184 DAVRYPILPKITRAPSRRAKREILHIRDSSLYMPRDFDISPYFEIVKPTIVNGFDYTTLH 243 Query: 241 WADKQKPLQEVAGEFGVFPEH-KSPPLVPEATDEETALPAA 280 WADKQKPL EVAGEF VFP ++PPLVPEA D+E A P A Sbjct: 244 WADKQKPLAEVAGEFAVFPGSVQAPPLVPEAADQEAAQPVA 284 >ref|YP_001202362.1| hypothetical protein BRADO0145 [Bradyrhizobium sp. ORS 278] emb|CAL74112.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 325 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 230/273 (84%), Positives = 250/273 (91%), Gaps = 1/273 (0%) Query: 1 MLDTVGKWIAGYLQKEVPGYEPFTPSDPDHLRSIMQPGDVLLVEGNNRISGIIKYLTQST 60 +LD +GK IA YLQKE+PGYEPFTPSDPD+LR +QPGDVLLVEGN+RISGIIKYLTQST Sbjct: 4 VLDQIGKLIAAYLQKEIPGYEPFTPSDPDYLRKDIQPGDVLLVEGNSRISGIIKYLTQST 63 Query: 61 WSHAALFVGPIDGAFEPDGEQHVLIEANIGEGVTSAPLSKYLAYHTRLCRPVGLSFEDRT 120 WSHAAL+VGPIDGA EPDGE HVL+EA +G+GV SAPLSKY AYHTR+CRPVGL+FEDR Sbjct: 64 WSHAALYVGPIDGAVEPDGEPHVLVEAYVGDGVISAPLSKYFAYHTRVCRPVGLTFEDRH 123 Query: 121 TVCRYAINRIGFGYDTKNIVDLARYLFPLPIPQRWRRRMIAFGSGDPTKIICSALIAQAF 180 TVCRYAINRIGFGYDTKNI+DL RYL P+PIPQRWRRRMIA GSGDPTK+ICSALIAQAF Sbjct: 124 TVCRYAINRIGFGYDTKNIIDLMRYLIPMPIPQRWRRRMIALGSGDPTKMICSALIAQAF 183 Query: 181 DAVRYPILPKITRAASRKARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYTALH 240 DAVRYPILPKITRA SR+A+REILHIRDSSLYMPRDFDISPYFE+VKPTIV+GFDYT LH Sbjct: 184 DAVRYPILPKITRAPSRRAKREILHIRDSSLYMPRDFDISPYFEIVKPTIVNGFDYTMLH 243 Query: 241 WADKQKPLQEVAGEFGVFPEH-KSPPLVPEATD 272 WADKQKPL EVAGEF VFP K+PPLVPE D Sbjct: 244 WADKQKPLAEVAGEFAVFPGSVKAPPLVPETVD 276 >ref|YP_567301.1| hypothetical protein RPD_0160 [Rhodopseudomonas palustris BisB5] gb|ABE37400.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 314 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/276 (83%), Positives = 247/276 (89%), Gaps = 2/276 (0%) Query: 1 MLDTVGKWIAGYLQKEVPGYEPFTPSDPDHLRSIMQPGDVLLVEGNNRISGIIKYLTQST 60 +LD +GK IA YLQKE PGYEPFTPSDPDHLRSIMQPGDVLLVEGN RISGIIKYLTQST Sbjct: 4 VLDAIGKVIANYLQKEEPGYEPFTPSDPDHLRSIMQPGDVLLVEGNARISGIIKYLTQST 63 Query: 61 WSHAALFVGPIDGAFEPDGEQHVLIEANIGEGVTSAPLSKYLAYHTRLCRPVGLSFEDRT 120 WSHAAL+VGPIDGA EPDGE HVLIEANIGEGV+S+PLS++L+YHTR+CRPVGLS EDR Sbjct: 64 WSHAALYVGPIDGATEPDGEPHVLIEANIGEGVSSSPLSRHLSYHTRICRPVGLSHEDRH 123 Query: 121 TVCRYAINRIGFGYDTKNIVDLARYLFPLPIPQRWRRRMIAFGSGDPTKIICSALIAQAF 180 TVCRYAINRIGFGYDTKNI+DL RYL PLP+PQRWRRRMIA GSGDPTKIICSALIAQAF Sbjct: 124 TVCRYAINRIGFGYDTKNIIDLMRYLVPLPVPQRWRRRMIALGSGDPTKIICSALIAQAF 183 Query: 181 DAVRYPILPKITRAASRKARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYTALH 240 D+VRYPILPKITRA SRKARREILHIRDSSLYMPRDFDISPYFEVVKPTI++GFDYTALH Sbjct: 184 DSVRYPILPKITRAGSRKARREILHIRDSSLYMPRDFDISPYFEVVKPTIINGFDYTALH 243 Query: 241 WADKQKPLQEVAGEFGVFPE--HKSPPLVPEATDEE 274 WADKQKPL EVAG F F + + PE D E Sbjct: 244 WADKQKPLAEVAGPFNTFQDDLENASSFAPETIDAE 279 >ref|YP_575431.1| hypothetical protein Nham_0070 [Nitrobacter hamburgensis X14] gb|ABE60971.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 311 Score = 478 bits (1230), Expect = e-133, Method: Compositional matrix adjust. Identities = 236/291 (81%), Positives = 254/291 (87%), Gaps = 2/291 (0%) Query: 1 MLDTVGKWIAGYLQKEVPGYEPFTPSDPDHLRSIMQPGDVLLVEGNNRISGIIKYLTQST 60 +LDTVGKWIA YLQKEV GYEPFTPSDP+HLR ++ GDVLL+EGN+RISGIIKYLTQST Sbjct: 4 VLDTVGKWIAAYLQKEVRGYEPFTPSDPEHLRDTIREGDVLLIEGNSRISGIIKYLTQST 63 Query: 61 WSHAALFVGPIDGAFEPDGEQHVLIEANIGEGVTSAPLSKYLAYHTRLCRPVGLSFEDRT 120 WSH+AL+VGP+DGA EPDGE HVLIEA+IGEGVTSAPLSKY YHTRLCRPVGLS EDR Sbjct: 64 WSHSALYVGPVDGAVEPDGEPHVLIEADIGEGVTSAPLSKYFPYHTRLCRPVGLSHEDRV 123 Query: 121 TVCRYAINRIGFGYDTKNIVDLARYLFPLPIPQRWRRRMIAFGSGDPTKIICSALIAQAF 180 TVCRYAINRIGFGYDTKNIVDL RYL PLP+PQRWRRRMIAFGSGDPTKIICSALIAQAF Sbjct: 124 TVCRYAINRIGFGYDTKNIVDLMRYLIPLPVPQRWRRRMIAFGSGDPTKIICSALIAQAF 183 Query: 181 DAVRYPILPKITRAASRKARREILHIRDSSLYMPRDFDISPYFEVVKPTIVHGFDYTALH 240 +AVRYPILPKITRA SRKARREILHIRDSSLYMPRDFDISPYFE+VKPTI GFDY +LH Sbjct: 184 EAVRYPILPKITRAGSRKARREILHIRDSSLYMPRDFDISPYFEIVKPTIERGFDYLSLH 243 Query: 241 WADKQKPLQEVAGEFGVF-PEHKSPPLVPEATDEETALPAAEMTAEGRAQV 290 WAD+QKPL E AG FG F E SPP VP + D A P E++A RA V Sbjct: 244 WADRQKPLAEGAGVFGPFQAEGLSPPSVPASHDAAPA-PVEEVSAIERAAV 293