BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0124.0045.p         (118 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002495492.1| response regulator receiver protein [Methylo...    90   1e-16
ref|ZP_00051481.2| COG0784: FOG: CheY-like receiver [Magnetospir...    86   1e-15
ref|ZP_00050744.2| COG0784: FOG: CheY-like receiver [Magnetospir...    86   2e-15
ref|YP_003449422.1| two-component hybrid sensor and regulator [A...    84   9e-15
ref|YP_532993.1| PAS/PAC sensor hybrid histidine kinase [Rhodops...    83   1e-14

>ref|YP_002495492.1| response regulator receiver protein [Methylobacterium nodulans ORS
           2060]
 gb|ACL55189.1| response regulator receiver protein [Methylobacterium nodulans ORS
           2060]
          Length = 130

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 2/117 (1%)

Query: 1   MVEDDPLVRELVVDALREEGYEVFHASNGEQALALCKRQI-ADVLVTDIRLPGGVDGWQI 59
           +VED+ L+ +LV   L + G  V  A N   AL +       D+L TDIRLPG +DGW +
Sbjct: 11  VVEDEVLLLDLVTAELEDAGLTVLQADNANAALGMLATDTPVDLLFTDIRLPGPMDGWTL 70

Query: 60  AERCREHDPQLQVIYATGFSPVEARPVLGSLTLHKPYQPDRIVEAVRQMGKERRPPS 116
           AE   +  P L+VIYATGF+    R   GSL   KPY+P  ++ A+   G    PPS
Sbjct: 71  AEAALKLRPGLKVIYATGFAGDAPRLAPGSLFFTKPYRPSAVIAAIAAFGTA-EPPS 126


>ref|ZP_00051481.2| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
           MS-1]
          Length = 132

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 2/110 (1%)

Query: 1   MVEDDPLVRELVVDALREEGYEVFHASNGEQALALCKR--QIADVLVTDIRLPGGVDGWQ 58
           +VED+ L+ E++      EG  V  AS+GE AL   +   +  D L TDIRLPG +DGW 
Sbjct: 9   IVEDNYLLLEMLTKLCEHEGMRVLAASSGEAALTTLRAGGEAIDWLFTDIRLPGLIDGWT 68

Query: 59  IAERCREHDPQLQVIYATGFSPVEARPVLGSLTLHKPYQPDRIVEAVRQM 108
           +A+  RE  P   +IYA+  +P+E R V GS+ + KP+Q   I+   R M
Sbjct: 69  VADAYRERHPHRPIIYASTSAPIEGRTVSGSIFVRKPFQARDILALARMM 118


>ref|ZP_00050744.2| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
           MS-1]
          Length = 120

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 1/110 (0%)

Query: 1   MVEDDPLVRELVVDALREEGYEVFHASNGEQALALCKR-QIADVLVTDIRLPGGVDGWQI 59
           +VED+ ++   V     + G+ V  A   E+A  L K  +  D+L TDIRLPG +DGW +
Sbjct: 9   VVEDEEMLLNAVAMEFEDAGFTVLCAGTAEEAYGLLKDGRTFDLLFTDIRLPGQLDGWDL 68

Query: 60  AERCREHDPQLQVIYATGFSPVEARPVLGSLTLHKPYQPDRIVEAVRQMG 109
           AER RE  P L VIY TG+S  + R V  S  + KPY+   ++ A RQ+G
Sbjct: 69  AERARELHPALPVIYVTGYSTEQPRQVSESTLVMKPYRMTAVMNAARQLG 118


>ref|YP_003449422.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
 dbj|BAI72878.1| two-component hybrid sensor and regulator [Azospirillum sp. B510]
          Length = 748

 Score = 83.6 bits (205), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 5/119 (4%)

Query: 1   MVEDDPLVRELVVDALREEGYEVFHASNGEQALALCKRQIA-DVLVTDIRLPGGVDGWQI 59
           +VED+PLVR  +V+ L E+G+ V  A +G  ALAL +   A D++V+D+ +PGGV G  +
Sbjct: 631 VVEDNPLVRMAMVEGLTEDGFTVETAEDGVSALALLETDRAFDLVVSDVVMPGGVSGIDL 690

Query: 60  AERCREHDPQLQVIYATGFSPVEARPVLGSLT---LHKPYQPDRIVEAVRQMGKERRPP 115
           A   R H P L+V+ A+G+SP E+   +G+ T   L KP+ PD++   +R + +    P
Sbjct: 691 ARHIRGHWPHLRVLLASGYSP-ESLATMGADTASVLAKPFTPDQLAARIRSLARASSAP 748


>ref|YP_532993.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris
           BisB18]
 gb|ABD88674.1| PAS/PAC sensor hybrid histidine kinase [Rhodopseudomonas palustris
           BisB18]
          Length = 743

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 5/113 (4%)

Query: 1   MVEDDPLVRELVVDALREEGYEVFHASNGEQALALCKRQI-ADVLVTDIRLPGGVDGWQI 59
           +VEDDP VR   V  LR  GY V  A +G +AL L       D+L TDI +PGG +GW +
Sbjct: 623 IVEDDPFVRSYAVMCLRSLGYTVLSAVDGNEALQLLGGDARIDILFTDIVMPGGTNGWDL 682

Query: 60  AERCREHDPQLQVIYATGFS----PVEARPVLGSLTLHKPYQPDRIVEAVRQM 108
           AER ++  P+++V+  +G++       AR   GS+ L KPY+   +   +RQM
Sbjct: 683 AERAQQMRPEMRVLLTSGYALETMAARARIRDGSVILTKPYRKADLARRLRQM 735