BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0124.0009.p (554 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202959.1| hypothetical protein BRADO0799 [Bradyrhizobi... 917 0.0 ref|YP_001232758.1| hypothetical protein Gura_4041 [Geobacter ur... 705 0.0 ref|YP_003629104.1| hypothetical protein Plim_1066 [Planctomyces... 667 0.0 ref|YP_004487206.1| hypothetical protein DelCs14_1828 [Delftia s... 614 e-173 ref|YP_003853923.1| hypothetical protein PB2503_03532 [Parvularc... 385 e-104 >ref|YP_001202959.1| hypothetical protein BRADO0799 [Bradyrhizobium sp. ORS 278] emb|CAL74722.1| conserved hypothetical protein, putative DHS-like NAD/FAD-binding domain [Bradyrhizobium sp. ORS 278] Length = 580 Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/554 (81%), Positives = 496/554 (89%) Query: 1 MWLLGAGGSAAAGIPTAWDMIWEFKQQLYISQRRVSPKMVADLANPAVRRELQSFVDGIG 60 MWLLGAG SAAAGIPTAWDMIWEFKQQLY+SQRRVSPK VADLANPAVRRELQSF+DGIG Sbjct: 27 MWLLGAGASAAAGIPTAWDMIWEFKQQLYVSQRRVSPKQVADLANPAVRRELQSFIDGIG 86 Query: 61 NLPPPGAPDEYAALFEAVYPSEADRRTYIASKVSGAKPSYGHVALATMMRAGRARLVWTT 120 +LP PG+PDEYAALFE+VYPSEADRRTYIASK+SGAKPSYGHVALAT+M+ R +LVWTT Sbjct: 87 SLPAPGSPDEYAALFESVYPSEADRRTYIASKISGAKPSYGHVALATLMKGARCQLVWTT 146 Query: 121 NFDPLIADGCAKVYGGTGQLTTVAIETRSLGRQVIDEGRWPVEVKMHGDFRSRRLKNTGD 180 NFDPL+ADGCAKVYGGTGQLTTVAIET SLGR IDEGRWPVEVK+HGDFRSRRLKNTGD Sbjct: 147 NFDPLVADGCAKVYGGTGQLTTVAIETGSLGRDAIDEGRWPVEVKLHGDFRSRRLKNTGD 206 Query: 181 ELREQDAKLRSLLIDSCGRWGLIVAGYSGRDDSIMDTLETALERDTPFPAGIFWLHRGED 240 ELREQDAKLR+LLIDSC RWGL+ GYSGRD S+MDTLE ALERD FPAG+FWLHRGED Sbjct: 207 ELREQDAKLRALLIDSCCRWGLVATGYSGRDASVMDTLEAALERDACFPAGLFWLHRGED 266 Query: 241 PPLPRVKRLLAAAARKGVDGGLVPIENFDEVLRDLVRLAEDLDTKALDELASERRIWSPA 300 PPLPRV+RLLAAAARK +D GLVPIENFDE LRDL+RL LDT LDE+ASERR+WSPA Sbjct: 267 PPLPRVQRLLAAAARKEIDSGLVPIENFDETLRDLMRLLPGLDTTVLDEIASERRVWSPA 326 Query: 301 PRPTGKRGFPVVRLNALELIETPTVCRRVGCGIGGVAEVRSAIEAAALPVLATRSRAGVL 360 PRPTG RG+PVVRLNALELIETPT+CRRV C GGVAEV+S IEA+ LPV+ TRS+AGVL Sbjct: 327 PRPTGNRGYPVVRLNALELIETPTLCRRVVCDAGGVAEVKSTIEASGLPVIGTRSKAGVL 386 Query: 361 AFGSDANVRAVLSAYDIESFDLHAIEVRRLRYESQERGLLREALTRALTRTHAMTADRRR 420 AFG+DA+VRAVLSAY+IESFDLH IE RRLRY+S ERGLLREALTRALTR H MTA RRR Sbjct: 387 AFGADADVRAVLSAYEIESFDLHPIEARRLRYDSHERGLLREALTRALTREHPMTAARRR 446 Query: 421 SSDLLTPASIDDAKWGPLKKLTGSLGGTVPKHPELSWREGLGIRLDWADERLWLLLEPRT 480 S+DLL PAS+DD +W PL+KLTGSLGG VPK P L W+EGLGIRLDWADERLWLL EPRT Sbjct: 447 SADLLAPASVDDERWLPLRKLTGSLGGMVPKQPGLRWQEGLGIRLDWADERLWLLFEPRT 506 Query: 481 VFEGITQGNRTTATDFARERTVRRYNPALNALLSFWSTLFACPERDILALGISAGVDAAF 540 VFEG+TQ NR A+DFARER+VRRYNPALN LL FWSTL A +RD+ ALGISAGVDA F Sbjct: 507 VFEGLTQANRAAASDFARERSVRRYNPALNVLLEFWSTLLASSQRDLPALGISAGVDAVF 566 Query: 541 RLDDTTAYSGRGRP 554 +L + TA+SGR RP Sbjct: 567 KLGNVTAFSGRARP 580 >ref|YP_001232758.1| hypothetical protein Gura_4041 [Geobacter uraniireducens Rf4] gb|ABQ28185.1| hypothetical protein Gura_4041 [Geobacter uraniireducens Rf4] Length = 579 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/551 (63%), Positives = 427/551 (77%), Gaps = 1/551 (0%) Query: 1 MWLLGAGGSAAAGIPTAWDMIWEFKQQLYISQRRVSPKMVADLANPAVRRELQSFVDGIG 60 MWLLGAG SA+AGIPTA DM+WEFKQQL+ISQRRVS + +ADL+NP +R +LQ++VD G Sbjct: 27 MWLLGAGASASAGIPTAGDMVWEFKQQLFISQRRVSHQSMADLSNPTIRAQLQAYVDSSG 86 Query: 61 NLPPPGAPDEYAALFEAVYPSEADRRTYIASKVSGAKPSYGHVALATMMRAGRARLVWTT 120 +LP PG+PDEYAALFEAVYP+E+DRR Y+ +K+ GAK SYGH+ALA++M A RLVWTT Sbjct: 87 SLPSPGSPDEYAALFEAVYPAESDRRAYLDAKMGGAKLSYGHLALASLMHAQLTRLVWTT 146 Query: 121 NFDPLIADGCAKVYGGTGQLTTVAIETRSLGRQVIDEGRWPVEVKMHGDFRSRRLKNTGD 180 NFDPL+AD CAKVY GTG LTTVA+E L Q I GRWP+EVK+HGDFRSRRLKNTGD Sbjct: 147 NFDPLVADACAKVYDGTGPLTTVALEAPDLAAQCIGGGRWPIEVKLHGDFRSRRLKNTGD 206 Query: 181 ELREQDAKLRSLLIDSCGRWGLIVAGYSGRDDSIMDTLETALERDTPFPAGIFWLHRGED 240 ELR QD +LR LL+DSC R+GL+V GYSGRDDSIMD LE LE++ +P+G+FWLHRGED Sbjct: 207 ELRYQDQRLRQLLVDSCKRFGLVVVGYSGRDDSIMDALEEVLEQNGAYPSGLFWLHRGED 266 Query: 241 PPLPRVKRLLAAAARKGVDGGLVPIENFDEVLRDLVRLAEDLDTKALDELASERRIWSPA 300 PPL RV++LLA A + GV+ L+ ++NFDE +RDLVR+ + +DT LD A+ERR WS A Sbjct: 267 PPLARVEQLLARAKQAGVESALIRVQNFDEAMRDLVRMVKSIDTTILDTFAAERRRWSSA 326 Query: 301 PRPTGKRGFPVVRLNALELIETPTVCRRVGCGIGGVAEVRSAIEAAALPVLATRSRAGVL 360 P P GKRG+PVVRLNA+ +++ PTVCRRV C IGG AE R A++ A + VL R+RAGVL Sbjct: 327 PPPGGKRGWPVVRLNAIPVVQIPTVCRRVVCEIGGHAEAREAVKQAGVDVLVARTRAGVL 386 Query: 361 AFGSDANVRAVLSAYDIESFDLHAIEVRRLRYESQERGLLREALTRALTRTHAMTADRRR 420 AFG+D +VRA Y+I FDLH I+ +RLRY+S ERGLLR ALTRAL R H + A RRR Sbjct: 387 AFGADGDVRAAFGGYNITDFDLHTIDNKRLRYDSGERGLLRSALTRALERHHRLDATRRR 446 Query: 421 SSDLLTPASIDDAKWGPLKKLTGSLGGTVPKHPELSWREGLGIRLDWADERLWLLLEPRT 480 S+DLL P+ ++ W PLK+L GSL GTV P L WREG+G RLDWADERLWLL+EPRT Sbjct: 447 SADLLAPSDPRESVWAPLKQLVGSLNGTVSGFPGLHWREGIGTRLDWADERLWLLIEPRT 506 Query: 481 VFEGITQGNRTTATDFARERTVRRYNPALNALLSFWSTLFACPERDILALGISAGVDAAF 540 VF+GI N+ A DFARERTV+RYN LN L+ FW+ L + D+ AL I GVDA F Sbjct: 507 VFDGINDENKAAAADFARERTVKRYNKQLNDLIVFWADLLSGGG-DLRALDIGGGVDAVF 565 Query: 541 RLDDTTAYSGR 551 L + T +S R Sbjct: 566 SLSNITGFSRR 576 >ref|YP_003629104.1| hypothetical protein Plim_1066 [Planctomyces limnophilus DSM 3776] gb|ADG66905.1| conserved hypothetical protein [Planctomyces limnophilus DSM 3776] Length = 578 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/554 (58%), Positives = 408/554 (73%), Gaps = 2/554 (0%) Query: 1 MWLLGAGGSAAAGIPTAWDMIWEFKQQLYISQRRVSPKMVADLANPAVRRELQSFVDGIG 60 MW+LGAG SA+AGIPTA DMIWEFKQ+L++SQRRVSP+ VADL+N VR +LQ+ +D G Sbjct: 27 MWMLGAGASASAGIPTASDMIWEFKQRLFVSQRRVSPQTVADLSNSVVRAQLQAHIDSSG 86 Query: 61 NLPPPGAPDEYAALFEAVYPSEADRRTYIASKVSGAKPSYGHVALATMMRAGRARLVWTT 120 L G+P+EYA+LFE+VYP+E DRR Y+ SK++GAKPS GH+A+AT+M++ R++WTT Sbjct: 87 QLASAGSPEEYASLFESVYPAETDRRAYLDSKLNGAKPSVGHLAIATLMQSDLTRILWTT 146 Query: 121 NFDPLIADGCAKVYGGTGQLTTVAIETRSLGRQVIDEGRWPVEVKMHGDFRSRRLKNTGD 180 NFD L+AD CAKVYG TG L TV ++ + Q++ + RWP+E+K+HGDFRSRRLKNT D Sbjct: 147 NFDSLVADACAKVYGNTGALATVGLDAPEVATQLVGDQRWPIEIKLHGDFRSRRLKNTDD 206 Query: 181 ELREQDAKLRSLLIDSCGRWGLIVAGYSGRDDSIMDTLETALERDTPFPAGIFWLHRGED 240 ELR QD +LR LL++ C R+GL+VAGYSGRDDSIMD LE A+ FPAG+FWL RG+ Sbjct: 207 ELRHQDVRLRQLLVECCRRFGLVVAGYSGRDDSIMDALEEAVT-SGAFPAGLFWLQRGDG 265 Query: 241 PPLPRVKRLLAAAARKGVDGGLVPIENFDEVLRDLVRLAEDLDTKALDELASERRIWSPA 300 PLPRV++LL A ++ L+PIENFDE LRD+ RL E +DTK LD +SERR WS A Sbjct: 266 RPLPRVEQLLRHAMASNIEVALIPIENFDETLRDVTRLLEGIDTKVLDAFSSERRHWSGA 325 Query: 301 PRPTGKRGFPVVRLNALELIETPTVCRRVGCGIGGVAEVRSAIEAAALPVLATRSRAGVL 360 P PTG+ G+PVVR NAL I+TPTVCRRV C IGG AEV A++ + VL R +GVL Sbjct: 326 PPPTGRMGWPVVRFNALP-IQTPTVCRRVVCEIGGHAEVADAVKQVGVNVLVGRVSSGVL 384 Query: 361 AFGSDANVRAVLSAYDIESFDLHAIEVRRLRYESQERGLLREALTRALTRTHAMTADRRR 420 AFG D+ +R S + I FDLH IE RLRY+S ERGLLR ALT AL R + A R R Sbjct: 385 AFGQDSEIRQAFSNHAISEFDLHTIEKARLRYDSGERGLLRAALTTALVRERGLDAFRHR 444 Query: 421 SSDLLTPASIDDAKWGPLKKLTGSLGGTVPKHPELSWREGLGIRLDWADERLWLLLEPRT 480 +DLL P + D +W LK LTGS+ G+VP+ EL+WREG+G+RLDWA+ERLW+L+EPR Sbjct: 445 RADLLAPQNPSDPRWARLKALTGSISGSVPRDSELTWREGIGVRLDWAEERLWVLIEPRV 504 Query: 481 VFEGITQGNRTTATDFARERTVRRYNPALNALLSFWSTLFACPERDILALGISAGVDAAF 540 VF G+T+ NR ATDFARERTV+RYN LN ++ FW+ +I ALGI GVDA F Sbjct: 505 VFVGMTEANRAAATDFARERTVKRYNRQLNDVIEFWAKYLEGDGIEIRALGIGNGVDATF 564 Query: 541 RLDDTTAYSGRGRP 554 + TAYS R P Sbjct: 565 SIGSETAYSRRLSP 578 >ref|YP_004487206.1| hypothetical protein DelCs14_1828 [Delftia sp. Cs1-4] gb|AEF88851.1| hypothetical protein DelCs14_1828 [Delftia sp. Cs1-4] Length = 555 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 310/553 (56%), Positives = 397/553 (71%), Gaps = 1/553 (0%) Query: 1 MWLLGAGGSAAAGIPTAWDMIWEFKQQLYISQRRVSPKMVADLANPAVRRELQSFVDGIG 60 MW LGAG SAAAGIPTA DMIWEFKQ+L++SQRR SP+MVADL+ P+VR+ LQS +D Sbjct: 1 MWFLGAGASAAAGIPTAGDMIWEFKQKLFVSQRRASPEMVADLSAPSVRQHLQSHIDSTS 60 Query: 61 NLPPPGAPDEYAALFEAVYPSEADRRTYIASKVSGAKPSYGHVALATMMRAGRARLVWTT 120 +LP GAP+EY+ +FE V+P+EADRR Y+ +K+SGAKPSYGH+ALA +M+A R+VWTT Sbjct: 61 SLPAEGAPNEYSVIFEKVFPAEADRRAYLDAKLSGAKPSYGHMALAALMKADHTRIVWTT 120 Query: 121 NFDPLIADGCAKVYGGTGQLTTVAIETR-SLGRQVIDEGRWPVEVKMHGDFRSRRLKNTG 179 NFDPL+AD CAKV+ GTG LT+VA + R+ + + RWP+E+K+HGDFR R+LKNT Sbjct: 121 NFDPLVADACAKVFDGTGALTSVAFGVGPEIARKAMADSRWPIELKLHGDFRWRQLKNTD 180 Query: 180 DELREQDAKLRSLLIDSCGRWGLIVAGYSGRDDSIMDTLETALERDTPFPAGIFWLHRGE 239 DELR QD +LR++L+DSC R GLIV GYSGRDDSIMD LE A FPAG+FWLHRG+ Sbjct: 181 DELRHQDRELRAVLVDSCRRSGLIVCGYSGRDDSIMDALEEAAAIPGAFPAGLFWLHRGD 240 Query: 240 DPPLPRVKRLLAAAARKGVDGGLVPIENFDEVLRDLVRLAEDLDTKALDELASERRIWSP 299 PP RV LL A GV+ GLV +++FDE LRDLVR+ LD K+L+ +R + + Sbjct: 241 GPPYERVTALLNLAHTHGVETGLVRVQSFDEGLRDLVRVVSKLDAKSLEAFGKQREVKTA 300 Query: 300 APRPTGKRGFPVVRLNALELIETPTVCRRVGCGIGGVAEVRSAIEAAALPVLATRSRAGV 359 AP GK +PVVRLNAL + + PTV RRV C +GG +VR A+ AA + VLA R+R GV Sbjct: 301 APAIVGKAHWPVVRLNALRIAQMPTVFRRVVCKVGGTGDVREAVAAAGVDVLAARTRPGV 360 Query: 360 LAFGSDANVRAVLSAYDIESFDLHAIEVRRLRYESQERGLLREALTRALTRTHAMTADRR 419 LAFG+DA+VR + +DI FDL +IE RRLRY+S ERGLLR+A+ RAL R + R+ Sbjct: 361 LAFGADADVRKAFAPFDIAEFDLASIETRRLRYDSAERGLLRDAVVRALCRHRGLGRIRK 420 Query: 420 RSSDLLTPASIDDAKWGPLKKLTGSLGGTVPKHPELSWREGLGIRLDWADERLWLLLEPR 479 R++DLL P S+D+ LKK LGGTVPK P L WREG +R++WA + LWLLLEP Sbjct: 421 RTTDLLYPMSVDEPGLQELKKHAAPLGGTVPKFPNLQWREGCAVRIEWAADALWLLLEPG 480 Query: 480 TVFEGITQGNRTTATDFARERTVRRYNPALNALLSFWSTLFACPERDILALGISAGVDAA 539 +F +T R A+ F RERT +RYN L++L+ FWS+ ++ ALG+S GVDAA Sbjct: 481 PIFLTLTAETRFAASSFGRERTFKRYNQKLDSLVDFWSSYLYGDGEEVHALGVSTGVDAA 540 Query: 540 FRLDDTTAYSGRG 552 FR TA++ R Sbjct: 541 FRFGHRTAFTRRA 553 >ref|YP_003853923.1| hypothetical protein PB2503_03532 [Parvularcula bermudensis HTCC2503] gb|ADM08781.1| hypothetical protein PB2503_03532 [Parvularcula bermudensis HTCC2503] Length = 594 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 229/570 (40%), Positives = 311/570 (54%), Gaps = 29/570 (5%) Query: 1 MWLLGAGGSAAAGIPTAWDMIWEFKQQLYISQRRVSPKMVADLANPAVRRELQSFVDGIG 60 MWLLGAG S AAGI T WDMIW+FK+ +Y SQ+ V + D + RR +Q + D G Sbjct: 37 MWLLGAGASRAAGIKTGWDMIWDFKRSIYRSQKGVRDSALPDNTDIRARRLIQRYFDETG 96 Query: 61 NLPPPGAPDEYAALFEAVYPSEADRRTYIASKVSGAKPSYGHVALATMMRAGRARLVWTT 120 + P P EYAA FEA Y +E DRR YI VS A+P++GH L +M +VWTT Sbjct: 97 DYPLSDDPTEYAAYFEAAYHAENDRRRYIEEAVSSARPTHGHRVLVALMDKNLCDIVWTT 156 Query: 121 NFDPLIADGCAKVYGGTGQLTTVAIETRSLGRQVIDEGRWPVEVKMHGDFRSRRLKNTGD 180 NFD L+ D A + TG+LT + S + I E RWPV K+HGDF+SR LKNT Sbjct: 157 NFDRLVEDAAAAKFETTGRLTDGDLNNPSTVVEAISESRWPVYGKLHGDFQSRSLKNTAS 216 Query: 181 ELREQDAKLRSLLIDSCGRWGLIVAGYSGRDDSIMDTLETALERDTPFPAGIFWLHRGED 240 EL+ QD LR L+D+C GL + GYSGRD S+M+ L A++ + G++W HRG+ Sbjct: 217 ELQSQDETLRRALVDACRTRGLAIVGYSGRDGSVMEALTHAID-EGGLSQGLYWFHRGDG 275 Query: 241 PPLPRVKRLLAAAARKGVDGGLVPIENFDEVLRDLVRLAEDLDTKALD---ELASERRIW 297 P V L+ A KG+D LV + FDE + ++ +LD A + E A R Sbjct: 276 EVFPAVSDLIRKARAKGIDAHLVEAQGFDEAMSEIATFLPELDGVAANFRTERAGRR--- 332 Query: 298 SPAPRPTGKRG--FPVVRLNALELIETPTVCRRVGCGIGGVAEVRSAIEAAALPVLATRS 355 A TGKRG FPV+R N + P + R +GC IG EVR +E + +ATR Sbjct: 333 --AAIQTGKRGKKFPVIRTNGFPVTAYPQIARLIGCEIGNAKEVREVLETSGHKGVATRI 390 Query: 356 RAGVLAFGSDANVRAVLSAYDIESFDLHAIEVRRLRYESQERGLLREALTRALTRTHAMT 415 R GV+AFG D ++RA S DI+ ++ H I RL ES ER LLR+AL A++ + Sbjct: 391 RDGVIAFGDDDDLRAAYSDNDIKEWNTHPILDSRLVRESGERRLLRDALFTAISTASRLE 450 Query: 416 ADRRRSSDL------LTPASIDDAKWGPLKKLTGSLGGTVPKHPELSWREGLGIRLDWAD 469 RR L +TPA P + G + GT + W E G+RLD+ D Sbjct: 451 LKYRRGETLVLAEPSVTPAGRFRGLGNP-NVVKGVVAGT-----RIDWIEVCGLRLDYRD 504 Query: 470 ERLWLLLEPRTVF---EGITQGNRTTATDFARERTVRRYNPALNALLSFWSTLFACPERD 526 +RLWLLL PRT + + ++ A DF RER RRYN N LL W T+ ++ Sbjct: 505 DRLWLLLNPRTHLVWNDEASPEDKNKAKDFVRERMARRYNSQSNDLLESWRTILLGADKG 564 Query: 527 ILALG---ISAGVDAAFRLDDTTAYSGRGR 553 +AL + G+ A+F ++ + +SGR + Sbjct: 565 EVALTAGPFTKGIGASFTINTVSGFSGRSQ 594