BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0124.0003.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01046459.1| polysaccharide deacetylase [Nitrobacter sp. N... 396 e-108 ref|YP_577364.1| polysaccharide deacetylase [Nitrobacter hamburg... 394 e-107 ref|NP_770788.1| oligosaccharide deacetylase [Bradyrhizobium jap... 376 e-102 ref|YP_318198.1| polysaccharide deacetylase [Nitrobacter winogra... 372 e-101 ref|YP_570071.1| polysaccharide deacetylase [Rhodopseudomonas pa... 369 e-100 >ref|ZP_01046459.1| polysaccharide deacetylase [Nitrobacter sp. Nb-311A] gb|EAQ35549.1| polysaccharide deacetylase [Nitrobacter sp. Nb-311A] Length = 312 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 200/312 (64%), Positives = 232/312 (74%), Gaps = 20/312 (6%) Query: 1 MRIATGLIFAGTVSLLASSAAWSQTSPPKG----ATAAPAAPAXTGH-RNRSPGSAEATA 55 MR+ATGLI AG VSL A + AWSQT P+G ATA PA + GS +A Sbjct: 1 MRMATGLILAGAVSLCAITVAWSQTPAPRGTQNVATATAPVPARVKRAQVACNGSPDALG 60 Query: 56 TAGARRLXRT----------RSASAARSRSIPPAVX-----GNTPAVLKALADECTTGIF 100 A ++ T + R + + GNTPAVLKALAD+CTTGIF Sbjct: 61 VARVVQIDTTGGPGFGFEHFKQLDFLRDKEVVLTFDDGPWPGNTPAVLKALADQCTTGIF 120 Query: 101 FPIGKHATYHPEILRQVYAAGHTVGAHTWSHANLNNKKLTEDQKKDEIERGYAAVKWALE 160 F IGKHATYHPEILRQV A+GHTVGAHTWSHANLNNKKL+E Q+KDEIE+G++AVKWALE Sbjct: 121 FSIGKHATYHPEILRQVLASGHTVGAHTWSHANLNNKKLSEAQRKDEIEKGFSAVKWALE 180 Query: 161 TSPSPFFRFPALQHPPEMVTYLGNRNIAIFSCDLDSFDFKASKPQQVIDTVMKKLNKLGK 220 T+P+PFFRFPALQHPPEMVTYLG RNIAIFSCD+DSFDF++ K QQV+D + KKL+K+GK Sbjct: 181 TAPAPFFRFPALQHPPEMVTYLGERNIAIFSCDVDSFDFRSHKAQQVVDNIFKKLDKVGK 240 Query: 221 GIILMHDFQKHTAEALPTLLTQLKAGGYKVVAMRAKFPVTVLPQYEQELAKDVKLPTVSS 280 GIILMHDFQKHTAEALP +L +LKAGGYKVV M+AK PV L QY+ EL KD KLPTVSS Sbjct: 241 GIILMHDFQKHTAEALPEILRRLKAGGYKVVQMKAKAPVETLAQYDDELKKDTKLPTVSS 300 Query: 281 RPVNSVVTTVDQ 292 RPVNSVV T+ + Sbjct: 301 RPVNSVVQTISE 312 >ref|YP_577364.1| polysaccharide deacetylase [Nitrobacter hamburgensis X14] gb|ABE62904.1| polysaccharide deacetylase [Nitrobacter hamburgensis X14] Length = 310 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 200/310 (64%), Positives = 234/310 (75%), Gaps = 18/310 (5%) Query: 1 MRIATGLIFAGTVSLLASSAAWSQTSPPKGATAAPAAPAX---TGHRNRSPGSAEATATA 57 MRIA GLIFAG VSL A++ AW+QT PKGA A +A A +G + GS +A A Sbjct: 1 MRIAAGLIFAGAVSLCATTVAWAQTPTPKGAQQAASATASTPPSGPKVACNGSPDALGVA 60 Query: 58 GARRLXRT----------RSASAARSRSIPPAVX-----GNTPAVLKALADECTTGIFFP 102 ++ T + R + + G+TPAVLKALAD+CTTGIFF Sbjct: 61 RVVQIDTTGGPGFGFEHFKQLDFLRDKEVVLTFDDGPWPGHTPAVLKALADQCTTGIFFA 120 Query: 103 IGKHATYHPEILRQVYAAGHTVGAHTWSHANLNNKKLTEDQKKDEIERGYAAVKWALETS 162 IGKHATYHPEILRQV AAGHT+G HTWSHANLNNKKLTE Q+KDEIE+G++AVKWALE + Sbjct: 121 IGKHATYHPEILRQVAAAGHTIGGHTWSHANLNNKKLTEAQRKDEIEKGFSAVKWALEAA 180 Query: 163 PSPFFRFPALQHPPEMVTYLGNRNIAIFSCDLDSFDFKASKPQQVIDTVMKKLNKLGKGI 222 P+PFFRFPALQHPPEMVTYLG RNIAIFSCD+DSFDFKA KP+QV+D + KKL+K+GKGI Sbjct: 181 PAPFFRFPALQHPPEMVTYLGERNIAIFSCDVDSFDFKARKPEQVVDNIFKKLDKIGKGI 240 Query: 223 ILMHDFQKHTAEALPTLLTQLKAGGYKVVAMRAKFPVTVLPQYEQELAKDVKLPTVSSRP 282 ILMHDFQKHTAEALP +L +LKAGGYKVV M+AK PV L QY+ EL KD KLPTVS+RP Sbjct: 241 ILMHDFQKHTAEALPEILRRLKAGGYKVVQMKAKAPVETLAQYDDELKKDTKLPTVSTRP 300 Query: 283 VNSVVTTVDQ 292 VNSVV T+ + Sbjct: 301 VNSVVQTISE 310 >ref|NP_770788.1| oligosaccharide deacetylase [Bradyrhizobium japonicum USDA 110] dbj|BAC49413.1| bll4148 [Bradyrhizobium japonicum USDA 110] Length = 335 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/211 (83%), Positives = 193/211 (91%), Gaps = 1/211 (0%) Query: 83 NTPAVLKALADECTTGIFFPIGKHATYHPEILRQVYAAGHTVGAHTWSHANLNNKKLTED 142 NTPAVLKALADECTTGIFF IGKHATY PEIL+QVYAAGHTVG HTWSHANLNNKKLTE Sbjct: 125 NTPAVLKALADECTTGIFFSIGKHATYEPEILKQVYAAGHTVGTHTWSHANLNNKKLTEA 184 Query: 143 QKKDEIERGYAAVKWALE-TSPSPFFRFPALQHPPEMVTYLGNRNIAIFSCDLDSFDFKA 201 Q+K+EIE+G +AVKWAL SPSPFFRFPALQHPPEMVTYLGNRN AIFSCD+DSFDFKA Sbjct: 185 QRKEEIEKGLSAVKWALGGISPSPFFRFPALQHPPEMVTYLGNRNTAIFSCDIDSFDFKA 244 Query: 202 SKPQQVIDTVMKKLNKLGKGIILMHDFQKHTAEALPTLLTQLKAGGYKVVAMRAKFPVTV 261 SKP++VI+TVMKKL+ GKGI+LMHDFQKHTAEALP LL +LKAGGYKVVAMRAKFP + Sbjct: 245 SKPEKVIETVMKKLDSKGKGIVLMHDFQKHTAEALPELLKRLKAGGYKVVAMRAKFPASS 304 Query: 262 LPQYEQELAKDVKLPTVSSRPVNSVVTTVDQ 292 LP+Y+QEL KDVKLPTVS RPVNSVVTTV + Sbjct: 305 LPEYDQELLKDVKLPTVSQRPVNSVVTTVSE 335 >ref|YP_318198.1| polysaccharide deacetylase [Nitrobacter winogradskyi Nb-255] gb|ABA04846.1| polysaccharide deacetylase [Nitrobacter winogradskyi Nb-255] Length = 308 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/308 (59%), Positives = 223/308 (72%), Gaps = 16/308 (5%) Query: 1 MRIATGLIFAGTVSLLASSAAWSQTSPPKGA-TAAPAAPAXTGHRNRSPGSAEATATAGA 59 MR+ LI AG +SL A++ AWSQT PKGA AAP +G + GS +A A Sbjct: 1 MRMTAVLISAGVISLCAATVAWSQTPAPKGAQNAAPVPVRASGPQVACNGSPDALGVARV 60 Query: 60 RRLXRT----------RSASAARSRSIPPAVX-----GNTPAVLKALADECTTGIFFPIG 104 ++ T + R + + G TPAVLKALAD+CTTGIFF IG Sbjct: 61 VQIDTTGGPGFGFEHFKQLDFLRDKEVVLTFDDGPWPGKTPAVLKALADQCTTGIFFSIG 120 Query: 105 KHATYHPEILRQVYAAGHTVGAHTWSHANLNNKKLTEDQKKDEIERGYAAVKWALETSPS 164 KHATYHPEILR V AAGHT+G HTWSHANLNNKKL+EDQ+K+EIE+G++AVKWALE P+ Sbjct: 121 KHATYHPEILRNVAAAGHTIGGHTWSHANLNNKKLSEDQRKEEIEKGFSAVKWALEAEPA 180 Query: 165 PFFRFPALQHPPEMVTYLGNRNIAIFSCDLDSFDFKASKPQQVIDTVMKKLNKLGKGIIL 224 PFFRFPALQHPPE+VTYLG RN+AIFSCD+DSFDFK +QV+ + KKL+K+GKGIIL Sbjct: 181 PFFRFPALQHPPEIVTYLGERNVAIFSCDVDSFDFKTRNAEQVVTNIFKKLDKVGKGIIL 240 Query: 225 MHDFQKHTAEALPTLLTQLKAGGYKVVAMRAKFPVTVLPQYEQELAKDVKLPTVSSRPVN 284 MHDFQKHTAEALP +L +LKAGGYKV M+AK P+ L QY++ L KD KLPTVS+RP++ Sbjct: 241 MHDFQKHTAEALPEILRRLKAGGYKVAQMKAKAPIQTLAQYDEALKKDTKLPTVSTRPID 300 Query: 285 SVVTTVDQ 292 SVV T+ + Sbjct: 301 SVVQTISE 308 >ref|YP_570071.1| polysaccharide deacetylase [Rhodopseudomonas palustris BisB5] gb|ABE40170.1| polysaccharide deacetylase [Rhodopseudomonas palustris BisB5] Length = 313 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 193/314 (61%), Positives = 224/314 (71%), Gaps = 23/314 (7%) Query: 1 MRIATGLIFAGTVSLLASSAAWSQTSPPKGATAAPAAPAXTGHRNR---------SPGS- 50 MRIATGL+ AG VSL A AAWSQ +P A AP +P + Sbjct: 1 MRIATGLLVAGAVSLSALGAAWSQAAPKTNGATAQPAPPQAAPAPAPAPAKQACANPDAL 60 Query: 51 -----AEATATAGA-------RRLXRTRSASAARSRSIPPAVXGNTPAVLKALADECTTG 98 E T G ++L R + P NTPAV+KALAD+CT Sbjct: 61 GVGRVVEIDTTGGPGFGFEHFKQLDFLRDKEVVLTFDDGPW-PSNTPAVVKALADQCTKA 119 Query: 99 IFFPIGKHATYHPEILRQVYAAGHTVGAHTWSHANLNNKKLTEDQKKDEIERGYAAVKWA 158 IFFPIGKHATYHPEIL+QV AAGHT+G+HTWSHANL+NKKLTE Q KDEIE+G+AAVKWA Sbjct: 120 IFFPIGKHATYHPEILKQVAAAGHTIGSHTWSHANLSNKKLTEQQAKDEIEKGFAAVKWA 179 Query: 159 LETSPSPFFRFPALQHPPEMVTYLGNRNIAIFSCDLDSFDFKASKPQQVIDTVMKKLNKL 218 + T+PSPFFRFPALQHPP +VTYLG RN+A+FSCDLDSFDFKA KP+QVIDTVMKK++KL Sbjct: 180 IGTAPSPFFRFPALQHPPALVTYLGTRNVAMFSCDLDSFDFKARKPEQVIDTVMKKVDKL 239 Query: 219 GKGIILMHDFQKHTAEALPTLLTQLKAGGYKVVAMRAKFPVTVLPQYEQELAKDVKLPTV 278 GKGIILMHDFQK TAEALP LL +LKAGGYKVV M+AK PV LPQY++EL K LPTV Sbjct: 240 GKGIILMHDFQKSTAEALPELLRRLKAGGYKVVQMKAKAPVQTLPQYDEELVKSAALPTV 299 Query: 279 SSRPVNSVVTTVDQ 292 S+RPV+SVV T+ + Sbjct: 300 SARPVSSVVQTISE 313