BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0123.0004.p (288 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766778.1| hypothetical protein blr0138 [Bradyrhizobium ja... 462 e-128 ref|YP_567411.1| acyl-CoA dehydrogenase-like protein [Rhodopseud... 414 e-114 ref|YP_004106521.1| acyl-CoA dehydrogenase domain-containing pro... 408 e-112 ref|YP_484181.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas p... 408 e-112 ref|NP_945833.1| acyl-CoA dehydrogenase [Rhodopseudomonas palust... 402 e-110 >ref|NP_766778.1| hypothetical protein blr0138 [Bradyrhizobium japonicum USDA 110] dbj|BAC45403.1| blr0138 [Bradyrhizobium japonicum USDA 110] Length = 354 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 245/288 (85%), Positives = 263/288 (91%), Gaps = 1/288 (0%) Query: 1 VLNVAGRHAIAVPLAETMLAGWLLTQGKINSPEGEMTVLPASPKDRVTLNADGSLSGRAR 60 +LN AGR A+AVPLAETMLAGWLL Q +I SPEGEMTV PASPKDR+TL+ADG+LSGRAR Sbjct: 68 LLNAAGRFAVAVPLAETMLAGWLLAQARIASPEGEMTVAPASPKDRITLDADGALSGRAR 127 Query: 61 GVPFAKDAKHFAVLAVGNGGVSIALVDAAKCRIESGIGLGGDHNDTVTLDKVQPVTTRPA 120 GVPFAK AKHFAVLA G GVSIALVDA+K RIESG+ +G DH+DTVTLDK QP+T +PA Sbjct: 128 GVPFAKAAKHFAVLAHGKDGVSIALVDASKGRIESGLNVGYDHSDTVTLDKAQPITIKPA 187 Query: 121 PKGFDQTTLMLMGGVVRSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA 180 PKGFDQT LMLMGGV RSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA Sbjct: 188 PKGFDQTALMLMGGVARSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA 247 Query: 181 GENAAALAAATSAADTIVNATSLDTDAVFLEAASAKIRCSEAAEKGSGIAHQVHGAIGFT 240 GE+AAALAAATSAAD I NATS + D V+LEAASAKIRC+EAAEKG IAHQVHGAIGFT Sbjct: 248 GESAAALAAATSAADAIANATSFN-DEVYLEAASAKIRCAEAAEKGGAIAHQVHGAIGFT 306 Query: 241 IEHILHRYSLRALAWRDDFGSESYWAVELGKLVANRGADELWPLVASR 288 +EHILHRYSLRALAWRDDFGSES+WAVELGKLVA RGADELWPLVASR Sbjct: 307 MEHILHRYSLRALAWRDDFGSESHWAVELGKLVARRGADELWPLVASR 354 >ref|YP_567411.1| acyl-CoA dehydrogenase-like protein [Rhodopseudomonas palustris BisB5] gb|ABE37510.1| acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris BisB5] Length = 355 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 217/288 (75%), Positives = 245/288 (85%), Gaps = 1/288 (0%) Query: 1 VLNVAGRHAIAVPLAETMLAGWLLTQGKINSPEGEMTVLPASPKDRVTLNADGSLSGRAR 60 VLN AGR +A PLAETMLAGWLL Q I SPEG MT+ P PKDR+TL DG+LSGRAR Sbjct: 69 VLNAAGRAGLAAPLAETMLAGWLLAQANIASPEGAMTIAPVHPKDRITLGPDGTLSGRAR 128 Query: 61 GVPFAKDAKHFAVLAVGNGGVSIALVDAAKCRIESGIGLGGDHNDTVTLDKVQPVTTRPA 120 GVPFA+DAK AVLA + G S+ALVDA+ CRI+ G+GLGGD +DTVT DKV P+ A Sbjct: 129 GVPFARDAKFIAVLAQRSDGASVALVDASTCRIDHGLGLGGDPSDTVTFDKVSPLKLAAA 188 Query: 121 PKGFDQTTLMLMGGVVRSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA 180 P+GFD T L+L+G V RSLQIAGALE ML+ISVRYSNERVAFEKKISKFQAVQHNLA+LA Sbjct: 189 PQGFDATALLLIGSVARSLQIAGALETMLEISVRYSNERVAFEKKISKFQAVQHNLAKLA 248 Query: 181 GENAAALAAATSAADTIVNATSLDTDAVFLEAASAKIRCSEAAEKGSGIAHQVHGAIGFT 240 GE +AALAAATSAADT+ NAT+ D DAV LEAA+AKIRC+EAAEKG+ IAHQV GAIGFT Sbjct: 249 GETSAALAAATSAADTLANATAFD-DAVMLEAAAAKIRCAEAAEKGAAIAHQVFGAIGFT 307 Query: 241 IEHILHRYSLRALAWRDDFGSESYWAVELGKLVANRGADELWPLVASR 288 EHILHRYSLRALAWRDDFG+ES+WAVELG++VA RGAD+LWPLVASR Sbjct: 308 SEHILHRYSLRALAWRDDFGNESHWAVELGRMVARRGADDLWPLVASR 355 >ref|YP_004106521.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU41788.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 354 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 213/288 (73%), Positives = 243/288 (84%), Gaps = 1/288 (0%) Query: 1 VLNVAGRHAIAVPLAETMLAGWLLTQGKINSPEGEMTVLPASPKDRVTLNADGSLSGRAR 60 VLN AGR +AVPLAETMLAGWLL QGKI +PEG MTV PA PKDR+ L+ADG LSGRAR Sbjct: 68 VLNAAGRAGLAVPLAETMLAGWLLAQGKIAAPEGAMTVAPAHPKDRIALDADGKLSGRAR 127 Query: 61 GVPFAKDAKHFAVLAVGNGGVSIALVDAAKCRIESGIGLGGDHNDTVTLDKVQPVTTRPA 120 VPFA+ +H AVLA G +IALV A+ CRI+ G+G+GGD +D VTLDKV P+ T PA Sbjct: 128 SVPFAQGVRHIAVLAQSAAGATIALVPASACRIDKGLGVGGDASDVVTLDKVAPIATAPA 187 Query: 121 PKGFDQTTLMLMGGVVRSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA 180 P+G QT+LMLMG V RSLQIAGALE +LD SV Y+NERVAFEKKI KFQAVQHNLA+LA Sbjct: 188 PQGLGQTSLMLMGAVARSLQIAGALETLLDRSVTYANERVAFEKKIGKFQAVQHNLAKLA 247 Query: 181 GENAAALAAATSAADTIVNATSLDTDAVFLEAASAKIRCSEAAEKGSGIAHQVHGAIGFT 240 GE +AALAAATSAAD I +A D DA+FLEAA+AKIRC+EAAEKG+ IAHQVHGAIGFT Sbjct: 248 GETSAALAAATSAADAISSADGFD-DALFLEAAAAKIRCAEAAEKGAAIAHQVHGAIGFT 306 Query: 241 IEHILHRYSLRALAWRDDFGSESYWAVELGKLVANRGADELWPLVASR 288 EHILHR+SLRALAWRDDFG+ES+WAVELG++VA RGAD+LWPLVASR Sbjct: 307 AEHILHRFSLRALAWRDDFGNESHWAVELGRMVAKRGADDLWPLVASR 354 >ref|YP_484181.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] gb|ABD05270.1| Acyl-CoA dehydrogenase-like [Rhodopseudomonas palustris HaA2] Length = 355 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 215/288 (74%), Positives = 244/288 (84%), Gaps = 1/288 (0%) Query: 1 VLNVAGRHAIAVPLAETMLAGWLLTQGKINSPEGEMTVLPASPKDRVTLNADGSLSGRAR 60 VLN AGR +AVPLAETMLAGWLL QGKI SPEG MTV P PKDR+ L ADG+LSGRAR Sbjct: 69 VLNAAGRAGLAVPLAETMLAGWLLAQGKIASPEGAMTVAPVHPKDRIALAADGTLSGRAR 128 Query: 61 GVPFAKDAKHFAVLAVGNGGVSIALVDAAKCRIESGIGLGGDHNDTVTLDKVQPVTTRPA 120 GVPFA+DA+H AVLA N IALV+AA CRI+ G+G+GGD +D VT D V P+T A Sbjct: 129 GVPFAQDARHIAVLAHSNDIAVIALVEAAACRIDHGLGVGGDPSDAVTFDGVTPLTFAVA 188 Query: 121 PKGFDQTTLMLMGGVVRSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA 180 P+GFDQT L+L+G VVRSLQIAGALEA+L+ISV Y+N+RVAFEK I+KFQAVQHNLARLA Sbjct: 189 PQGFDQTALLLIGCVVRSLQIAGALEALLEISVAYANQRVAFEKPIAKFQAVQHNLARLA 248 Query: 181 GENAAALAAATSAADTIVNATSLDTDAVFLEAASAKIRCSEAAEKGSGIAHQVHGAIGFT 240 GE +AALAAATSAAD I NAT+ D DAV LEAA+AKIRC+EAAEKG+ IAHQV GAIGFT Sbjct: 249 GETSAALAAATSAADAISNATTFD-DAVMLEAAAAKIRCAEAAEKGAAIAHQVFGAIGFT 307 Query: 241 IEHILHRYSLRALAWRDDFGSESYWAVELGKLVANRGADELWPLVASR 288 EHILHRYSLRAL WRDDFG+ES+WAV LG++VA RGAD+LWPLVASR Sbjct: 308 SEHILHRYSLRALGWRDDFGNESHWAVALGRMVAARGADDLWPLVASR 355 >ref|NP_945833.1| acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] emb|CAE25924.1| possible acyl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] Length = 354 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 211/288 (73%), Positives = 240/288 (83%), Gaps = 1/288 (0%) Query: 1 VLNVAGRHAIAVPLAETMLAGWLLTQGKINSPEGEMTVLPASPKDRVTLNADGSLSGRAR 60 VLN AGR +AVPLAETMLAGWLL QGKI +PEG MT+ PA PKD +TL+ADG LSGRAR Sbjct: 68 VLNAAGRAGLAVPLAETMLAGWLLAQGKIAAPEGAMTIAPAHPKDHLTLDADGRLSGRAR 127 Query: 61 GVPFAKDAKHFAVLAVGNGGVSIALVDAAKCRIESGIGLGGDHNDTVTLDKVQPVTTRPA 120 VPFA+ A+H AVLA G IALV A+ CRI+ G+G+GGD +D VT DK+ P+ T A Sbjct: 128 SVPFAQHAQHIAVLAQSAAGAKIALVLASACRIDKGLGVGGDASDVVTFDKIAPIATASA 187 Query: 121 PKGFDQTTLMLMGGVVRSLQIAGALEAMLDISVRYSNERVAFEKKISKFQAVQHNLARLA 180 PK DQT+LMLMG V RSLQIAGALE +LD SV Y+NERVAFEKKI KFQAVQHNLA+LA Sbjct: 188 PKDLDQTSLMLMGAVARSLQIAGALETLLDRSVTYANERVAFEKKIGKFQAVQHNLAKLA 247 Query: 181 GENAAALAAATSAADTIVNATSLDTDAVFLEAASAKIRCSEAAEKGSGIAHQVHGAIGFT 240 GE +AALAAATSAAD I +A D DAVFLEA++AKIRC+EAAEKG+ IAHQVHGAIGFT Sbjct: 248 GETSAALAAATSAADAISSADGFD-DAVFLEASAAKIRCAEAAEKGAAIAHQVHGAIGFT 306 Query: 241 IEHILHRYSLRALAWRDDFGSESYWAVELGKLVANRGADELWPLVASR 288 EHILHR+SLRALAWRDDFG+ES+WAVELG++VA RGAD LWPLVASR Sbjct: 307 AEHILHRFSLRALAWRDDFGNESHWAVELGRMVAKRGADNLWPLVASR 354