BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0122.0001.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001242083.1| hypothetical protein BBta_6257 [Bradyrhizobi...   244   4e-63
ref|YP_001207630.1| hypothetical protein BRADO5745 [Bradyrhizobi...   242   2e-62
ref|NP_773331.1| hypothetical protein bll6691 [Bradyrhizobium ja...   238   2e-61
ref|NP_948952.1| rhodanese-like protein [Rhodopseudomonas palust...   236   6e-61
ref|YP_001993105.1| rhodanese domain-containing protein [Rhodops...   234   2e-60

>ref|YP_001242083.1| hypothetical protein BBta_6257 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38177.1| hypothetical protein BBta_6257 [Bradyrhizobium sp. BTAi1]
          Length = 137

 Score =  244 bits (622), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 115/136 (84%), Positives = 126/136 (92%)

Query: 1   MPQNIHRGIKVMIDEANAEIETISAADAITLIGKNDVVIVDIRDPREIERDGKIPGAFSC 60
           MPQ I RGIKV++DEANAEI T+SAA+AI    ++DVVIVDIRDPREIERDG+IPGAFSC
Sbjct: 1   MPQTITRGIKVLLDEANAEIATLSAAEAIEAAKRDDVVIVDIRDPREIERDGRIPGAFSC 60

Query: 61  TRGMLEFWIDPNSPYAKPIFQEDKKFIFHCAGGLRSALAAKTAKDMGLKPVAHMGGGFAA 120
           TRGMLEFWIDP SPYAKPIFQ+DK FIFHCAGGLRSALAAKTA+DMGLKPVAH+GGGFAA
Sbjct: 61  TRGMLEFWIDPQSPYAKPIFQQDKTFIFHCAGGLRSALAAKTAQDMGLKPVAHIGGGFAA 120

Query: 121 WREAGGPIEAWEPKKK 136
           WREAGGP+EAW PKKK
Sbjct: 121 WREAGGPVEAWAPKKK 136


>ref|YP_001207630.1| hypothetical protein BRADO5745 [Bradyrhizobium sp. ORS 278]
 emb|CAL79413.1| conserved hypothetical protein; putative Rhodanese domain protein
           [Bradyrhizobium sp. ORS 278]
          Length = 137

 Score =  242 bits (617), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 114/136 (83%), Positives = 125/136 (91%)

Query: 1   MPQNIHRGIKVMIDEANAEIETISAADAITLIGKNDVVIVDIRDPREIERDGKIPGAFSC 60
           MPQ I RGIK +IDEANAEIET+SAA+AI    ++DVVIVDIRDPREIER+GKIPGAFSC
Sbjct: 1   MPQTITRGIKALIDEANAEIETLSAAEAIEAAKRDDVVIVDIRDPREIEREGKIPGAFSC 60

Query: 61  TRGMLEFWIDPNSPYAKPIFQEDKKFIFHCAGGLRSALAAKTAKDMGLKPVAHMGGGFAA 120
           TRGMLEFWIDP SPYAKP+FQ+DK FIFHCAGGLRSALAAKTA+DMGL PVAH+GGGFAA
Sbjct: 61  TRGMLEFWIDPQSPYAKPVFQQDKTFIFHCAGGLRSALAAKTAQDMGLTPVAHIGGGFAA 120

Query: 121 WREAGGPIEAWEPKKK 136
           WREAGGP+EAW PKKK
Sbjct: 121 WREAGGPVEAWVPKKK 136


>ref|NP_773331.1| hypothetical protein bll6691 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51956.1| bll6691 [Bradyrhizobium japonicum USDA 110]
          Length = 137

 Score =  238 bits (608), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 112/137 (81%), Positives = 123/137 (89%)

Query: 1   MPQNIHRGIKVMIDEANAEIETISAADAITLIGKNDVVIVDIRDPREIERDGKIPGAFSC 60
           MPQ I RGIK +I EANAEIET++A DAI +    DVVIVDIRDPREIERDG+IPGAF+C
Sbjct: 1   MPQTITRGIKALIYEANAEIETLTAKDAIEISKNGDVVIVDIRDPREIERDGRIPGAFAC 60

Query: 61  TRGMLEFWIDPNSPYAKPIFQEDKKFIFHCAGGLRSALAAKTAKDMGLKPVAHMGGGFAA 120
           TRGMLEFWIDP SPYAKPIFQEDKKF+FHCAGGLRSALAAKTA+DMGLKPVAH+ GG+AA
Sbjct: 61  TRGMLEFWIDPQSPYAKPIFQEDKKFVFHCAGGLRSALAAKTAQDMGLKPVAHIAGGYAA 120

Query: 121 WREAGGPIEAWEPKKKG 137
           WR+AGGP E WEPKKKG
Sbjct: 121 WRDAGGPTEQWEPKKKG 137


>ref|NP_948952.1| rhodanese-like protein [Rhodopseudomonas palustris CGA009]
 emb|CAE29055.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 138

 Score =  236 bits (603), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 113/138 (81%), Positives = 124/138 (89%), Gaps = 2/138 (1%)

Query: 1   MPQNIHRGIKVMIDEANAEIETISAADAITL--IGKNDVVIVDIRDPREIERDGKIPGAF 58
           MPQ I RGIK M+DEAN+ IET++ ADAI L   G +DVVIVDIRDPREIERDGKIPG+F
Sbjct: 1   MPQTITRGIKAMLDEANSSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF 60

Query: 59  SCTRGMLEFWIDPNSPYAKPIFQEDKKFIFHCAGGLRSALAAKTAKDMGLKPVAHMGGGF 118
           SCTRGMLEFWIDP SPYAKPIFQEDKKF+F+CAGGLRSALAAKTA+DMGLKPVAH+ GGF
Sbjct: 61  SCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGF 120

Query: 119 AAWREAGGPIEAWEPKKK 136
            AWR+AGGPIEAW PKKK
Sbjct: 121 GAWRDAGGPIEAWAPKKK 138


>ref|YP_001993105.1| rhodanese domain-containing protein [Rhodopseudomonas palustris
           TIE-1]
 gb|ACF02630.1| Rhodanese domain protein [Rhodopseudomonas palustris TIE-1]
          Length = 138

 Score =  234 bits (598), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 113/138 (81%), Positives = 123/138 (89%), Gaps = 2/138 (1%)

Query: 1   MPQNIHRGIKVMIDEANAEIETISAADAITL--IGKNDVVIVDIRDPREIERDGKIPGAF 58
           MPQ I RGIK M+DEAN+ IET++ ADAI L   G +DVVIVDIRDPREIERDGKIPG+F
Sbjct: 1   MPQTITRGIKAMLDEANSSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF 60

Query: 59  SCTRGMLEFWIDPNSPYAKPIFQEDKKFIFHCAGGLRSALAAKTAKDMGLKPVAHMGGGF 118
           SCTRGMLEFWIDP SPYAKPIFQEDKKF+F+CAGGLRSALAAKTA DMGLKPVAH+ GGF
Sbjct: 61  SCTRGMLEFWIDPQSPYAKPIFQEDKKFVFYCAGGLRSALAAKTAHDMGLKPVAHIEGGF 120

Query: 119 AAWREAGGPIEAWEPKKK 136
            AWR+AGGPIEAW PKKK
Sbjct: 121 GAWRDAGGPIEAWVPKKK 138