BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0121.0008.p (417 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770970.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonic... 779 0.0 ref|YP_577584.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgens... 768 0.0 ref|ZP_01047293.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-3... 756 0.0 ref|YP_001205538.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. ... 735 0.0 ref|YP_001239936.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. ... 735 0.0 >ref|NP_770970.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] sp|Q89M63.1|SYY_BRAJA RecName: Full=Tyrosyl-tRNA synthetase; AltName: Full=Tyrosine--tRNA ligase; Short=TyrRS dbj|BAC49595.1| tyrosyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 417 Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/417 (89%), Positives = 392/417 (94%) Query: 1 MTAFKSDFLNTLQERGFVHQCSDFEGLDALAAKGQATAYVGYDCTAPSLHIGNFLTMMML 60 MTAFKSDFLN LQERGF+HQCSDFEGLDALAAKG+ATAYVGYDCTA SLHIGN+LTMMML Sbjct: 1 MTAFKSDFLNILQERGFIHQCSDFEGLDALAAKGEATAYVGYDCTARSLHIGNYLTMMML 60 Query: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKASIRGVFAKVLRYGDGH 120 +WLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANK SIRGVFAKVLRYGDG Sbjct: 61 HWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKESIRGVFAKVLRYGDGK 120 Query: 121 SDAIMLDNAEWLTRLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 SDA+MLDNAEWLT+LNWIEMLRD+GRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ Sbjct: 121 SDAVMLDNAEWLTKLNWIEMLRDVGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 Query: 181 AYDFVELSRRAGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGDKMGKT 240 AYDFVEL++R GC+LQMGGSDQWGNI+ GVDLGRRMGT QLFALTTPLLTTASG KMGKT Sbjct: 181 AYDFVELAKRTGCKLQMGGSDQWGNIIMGVDLGRRMGTHQLFALTTPLLTTASGAKMGKT 240 Query: 241 AKGAVWLNADQFSPYDFWQYWRNVEDADVVKFLKLFTILPMSEISKLATLAGGEINEAKK 300 A+GAVWLNADQFSPYDFWQYWRN EDADV KFLKLFT LPMSEI KL L G EINEAKK Sbjct: 241 AQGAVWLNADQFSPYDFWQYWRNTEDADVGKFLKLFTTLPMSEIGKLEALGGSEINEAKK 300 Query: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAETLPTVEIPRGEFEAGVGVLVAFVKAE 360 VLATEATALLHGRDAANEAAETARRTFEEGALAE+LPTVEIPRGE +AG GVL AFVKA Sbjct: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAESLPTVEIPRGELDAGFGVLNAFVKAG 360 Query: 361 LVASNGEARRQIKGGGLRVNDAAVTDEKMLLSSADLTPEGVVKLSLGKKRHVLLKPA 417 LVASNGEARRQIKGGGLRVND VTD+KM LS+A LTPEGV+KLS GKK+H+L+KPA Sbjct: 361 LVASNGEARRQIKGGGLRVNDEPVTDDKMALSAAHLTPEGVIKLSFGKKKHILIKPA 417 >ref|YP_577584.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14] gb|ABE63124.1| tyrosyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 418 Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/418 (87%), Positives = 390/418 (93%), Gaps = 1/418 (0%) Query: 1 MTAFKSDFLNTLQERGFVHQCSDFEGLDALAAKGQATAYVGYDCTAPSLHIGNFLTMMML 60 M AFKSDFLN LQERGF+HQCSD EGLDALAAKGQATAYVGYDCTAPSLHIGN+LTMMML Sbjct: 1 MAAFKSDFLNILQERGFIHQCSDVEGLDALAAKGQATAYVGYDCTAPSLHIGNYLTMMML 60 Query: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKASIRGVFAKVLRYGDGH 120 YWLQQSGNKPITLMGGGTTMVGDPSGKDE+RA+R+VAEIEANKASIRGVFAKVL YG G Sbjct: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFAKVLHYGSGA 120 Query: 121 SDAIMLDNAEWLTRLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 +DA+MLDNAEWLT+LNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ Sbjct: 121 NDAVMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 Query: 181 AYDFVELSRRAGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGDKMGKT 240 AYDFVELSRR GCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASG KMGKT Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240 Query: 241 AKGAVWLNADQFSPYDFWQYWRNVEDADVVKFLKLFTILPMSEISKLATLAGGEINEAKK 300 A+GAVWLNAD FSPYDFWQYWRNVEDADVV+FLKLFTILPM EI+KLA L EINEAKK Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVVRFLKLFTILPMDEIAKLAALRDAEINEAKK 300 Query: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAETLPTVEIPRGEFEAGVGVLVAFV-KA 359 VLATEATALLHGRD A +AA+TAR TFE+GA+AE+LPTV+IP E + G+GVLVAF +A Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGAIAESLPTVDIPHSELKKGIGVLVAFSERA 360 Query: 360 ELVASNGEARRQIKGGGLRVNDAAVTDEKMLLSSADLTPEGVVKLSLGKKRHVLLKPA 417 LVASNGEARRQIK GGLRVND AVTDEKM+L+S LTPEGV+KLS+GKKRHVLL+PA Sbjct: 361 RLVASNGEARRQIKSGGLRVNDVAVTDEKMMLTSDHLTPEGVIKLSMGKKRHVLLRPA 418 >ref|ZP_01047293.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A] gb|EAQ34721.1| tyrosyl-tRNA synthetase [Nitrobacter sp. Nb-311A] Length = 418 Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/418 (86%), Positives = 388/418 (92%), Gaps = 1/418 (0%) Query: 1 MTAFKSDFLNTLQERGFVHQCSDFEGLDALAAKGQATAYVGYDCTAPSLHIGNFLTMMML 60 M+AFKSDFLN LQERGF+HQCSDF GLDALAAKG+ATAYVGYDCTAPSLHIGN+LTMMML Sbjct: 1 MSAFKSDFLNILQERGFIHQCSDFAGLDALAAKGEATAYVGYDCTAPSLHIGNYLTMMML 60 Query: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKASIRGVFAKVLRYGDGH 120 YWLQQSGNKPITLMGGGTTMVGDPSGKDE+RA+R+VAEIEANKASIRGVF KVLRYG G Sbjct: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDESRAIRSVAEIEANKASIRGVFDKVLRYGSGP 120 Query: 121 SDAIMLDNAEWLTRLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 +DA+MLDNAEWLT+LNWIE LRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ Sbjct: 121 NDAVMLDNAEWLTKLNWIETLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 Query: 181 AYDFVELSRRAGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGDKMGKT 240 AYDFVELSRR GCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASG KMGKT Sbjct: 181 AYDFVELSRRVGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGAKMGKT 240 Query: 241 AKGAVWLNADQFSPYDFWQYWRNVEDADVVKFLKLFTILPMSEISKLATLAGGEINEAKK 300 A+GAVWLNAD FSPYDFWQYWRNVEDADV +FLKLFTILPMSEI+KLA L EINEAKK Sbjct: 241 AQGAVWLNADAFSPYDFWQYWRNVEDADVGRFLKLFTILPMSEIAKLAALRDAEINEAKK 300 Query: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAETLPTVEIPRGEFEAGVGVLVAFV-KA 359 VLATEATALLHGRD A +AA+TAR TFE+G++AE+LPTV+I E E G+GVLVAF +A Sbjct: 301 VLATEATALLHGRDEAEKAADTARTTFEQGSIAESLPTVDIKHDELERGIGVLVAFSERA 360 Query: 360 ELVASNGEARRQIKGGGLRVNDAAVTDEKMLLSSADLTPEGVVKLSLGKKRHVLLKPA 417 LVASNGEARRQIKGGGLRVND AV DEKM+L+ LTPEGV+KLS+GKKRHVLL+PA Sbjct: 361 RLVASNGEARRQIKGGGLRVNDVAVADEKMILTPDHLTPEGVIKLSMGKKRHVLLRPA 418 >ref|YP_001205538.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. ORS 278] emb|CAL77312.1| tyrosine tRNA synthetase [Bradyrhizobium sp. ORS 278] Length = 417 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/417 (87%), Positives = 381/417 (91%) Query: 1 MTAFKSDFLNTLQERGFVHQCSDFEGLDALAAKGQATAYVGYDCTAPSLHIGNFLTMMML 60 MT FKSDFLN LQ RGF+HQCSDFEGLD LAAKGQATAYVGYDCTA SLHIGNFLTMMML Sbjct: 1 MTGFKSDFLNVLQSRGFIHQCSDFEGLDTLAAKGQATAYVGYDCTARSLHIGNFLTMMML 60 Query: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKASIRGVFAKVLRYGDGH 120 YWLQQ+GNKPITLMGGGTTMVGDPSGKDETRAMRTV EIEANKASIRGVFAKVLRYGDG Sbjct: 61 YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLRYGDGA 120 Query: 121 SDAIMLDNAEWLTRLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 +DAIMLDNAEWLT+LNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 Query: 181 AYDFVELSRRAGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGDKMGKT 240 AYDFVELSRR GCRLQMGGSDQWGNIVNGV+LGRRMGT QLFALTTPLLTTASG KMGKT Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240 Query: 241 AKGAVWLNADQFSPYDFWQYWRNVEDADVVKFLKLFTILPMSEISKLATLAGGEINEAKK 300 A+GA+WLNADQ SPY+FWQYWRN EDADVVKFLKLFT LP++EI KL L G EINEAKK Sbjct: 241 AQGAIWLNADQCSPYEFWQYWRNTEDADVVKFLKLFTTLPLAEIEKLGALQGAEINEAKK 300 Query: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAETLPTVEIPRGEFEAGVGVLVAFVKAE 360 LA AT LLHG +AA AAETARRTFEEGA+AE LP VE+ R E +AG+GVL AFVKA Sbjct: 301 ALADAATTLLHGGEAARTAAETARRTFEEGAIAENLPKVEVARSELDAGLGVLNAFVKAG 360 Query: 361 LVASNGEARRQIKGGGLRVNDAAVTDEKMLLSSADLTPEGVVKLSLGKKRHVLLKPA 417 LVASNGEARRQIKGGGLRVND AVTDEKM L+ ADLT EGV+KLSLGKKRHVL+KPA Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMTLTRADLTSEGVIKLSLGKKRHVLVKPA 417 >ref|YP_001239936.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gb|ABQ36030.1| tyrosyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 417 Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/417 (87%), Positives = 382/417 (91%) Query: 1 MTAFKSDFLNTLQERGFVHQCSDFEGLDALAAKGQATAYVGYDCTAPSLHIGNFLTMMML 60 MT FKSDFLN LQ RGF+HQCSDFEGLDALAAKGQATAYVGYDCTA SLHIGNFLTMMML Sbjct: 1 MTGFKSDFLNVLQSRGFIHQCSDFEGLDALAAKGQATAYVGYDCTARSLHIGNFLTMMML 60 Query: 61 YWLQQSGNKPITLMGGGTTMVGDPSGKDETRAMRTVAEIEANKASIRGVFAKVLRYGDGH 120 YWLQQ+GNKPITLMGGGTTMVGDPSGKDETRAMRTV EIEANKASIRGVFAKVL YGDG Sbjct: 61 YWLQQTGNKPITLMGGGTTMVGDPSGKDETRAMRTVEEIEANKASIRGVFAKVLAYGDGA 120 Query: 121 SDAIMLDNAEWLTRLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 +DAIMLDNAEWLT+LNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ Sbjct: 121 TDAIMLDNAEWLTKLNWIEMLRDIGRHFSVNRMLTMDSVRLRLEREQEMSFIEFNYMVCQ 180 Query: 181 AYDFVELSRRAGCRLQMGGSDQWGNIVNGVDLGRRMGTPQLFALTTPLLTTASGDKMGKT 240 AYDFVELSRR GCRLQMGGSDQWGNIVNGV+LGRRMGT QLFALTTPLLTTASG KMGKT Sbjct: 181 AYDFVELSRRTGCRLQMGGSDQWGNIVNGVELGRRMGTEQLFALTTPLLTTASGAKMGKT 240 Query: 241 AKGAVWLNADQFSPYDFWQYWRNVEDADVVKFLKLFTILPMSEISKLATLAGGEINEAKK 300 A+GA+WLNADQ SPYDFWQYWRN EDADVVKFLKLFT LP+SEI KL L G EINEAKK Sbjct: 241 AQGAIWLNADQCSPYDFWQYWRNTEDADVVKFLKLFTTLPLSEIEKLGALQGAEINEAKK 300 Query: 301 VLATEATALLHGRDAANEAAETARRTFEEGALAETLPTVEIPRGEFEAGVGVLVAFVKAE 360 LA AT LLHG +AA AAETARRTFEEGA+AE LPTVE+ + E +AG+GVL AFVKA Sbjct: 301 ALADAATTLLHGEEAARTAAETARRTFEEGAIAENLPTVEVAQAELDAGLGVLNAFVKAG 360 Query: 361 LVASNGEARRQIKGGGLRVNDAAVTDEKMLLSSADLTPEGVVKLSLGKKRHVLLKPA 417 LVASNGEARRQIKGGGLRVND AVTDEKM L++ +LT EGV+KLSLGKKRHVL+KPA Sbjct: 361 LVASNGEARRQIKGGGLRVNDVAVTDEKMALTAKELTAEGVIKLSLGKKRHVLVKPA 417