BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0121.0007.p (426 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770969.1| hypothetical protein bll4329 [Bradyrhizobium ja... 599 e-169 ref|YP_001991721.1| major facilitator superfamily protein [Rhodo... 553 e-155 ref|NP_947801.1| putative permease [Rhodopseudomonas palustris C... 549 e-154 ref|YP_004109367.1| major facilitator superfamily protein [Rhodo... 545 e-153 ref|ZP_08629054.1| major facilitator superfamily protein [Bradyr... 530 e-148 >ref|NP_770969.1| hypothetical protein bll4329 [Bradyrhizobium japonicum USDA 110] dbj|BAC49594.1| bll4329 [Bradyrhizobium japonicum USDA 110] Length = 419 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 313/419 (74%), Positives = 352/419 (84%), Gaps = 3/419 (0%) Query: 11 MDQQT---TPPNDTLATPAKQSRVALNVLALCFVLSVLGRGLSDSFTVFLKPISENFGWD 67 MDQ+T + + ATP RVAL VLALCF L+VLGRGL DSFTVFLKPISE+FGWD Sbjct: 1 MDQKTPRESRKDGVAATPGGAVRVALTVLALCFTLAVLGRGLGDSFTVFLKPISESFGWD 60 Query: 68 RASVVSVYSLTWLASGLTAPLVGRLFDRSGPRVVYALGLSLLGCAFLVASRAQALWQFQL 127 RA +VSVYSLTWLASGLTAP VGRLFD SGPR+VYALGLSLLG AFL+A+ AQ LWQFQL Sbjct: 61 RAQIVSVYSLTWLASGLTAPFVGRLFDHSGPRIVYALGLSLLGAAFLIAAHAQHLWQFQL 120 Query: 128 SVGLCVGFGTALIGNVSNSILLGRWFGPRLPTAMAVMYSATGAGLLLLLPLSQVLIDRIG 187 S+GLCVG G A IG V NSILLGRWFGPRLPTAM+V+YSA G G+L LLP SQ+LID IG Sbjct: 121 SIGLCVGIGVAFIGIVPNSILLGRWFGPRLPTAMSVVYSAMGGGVLALLPASQLLIDHIG 180 Query: 188 WREAYQVFGIGALCLLVPLVFLPWRLLAGGSPHIVRKSESSLADEGWTLLSAMRHHAFWA 247 WR YQ+FG AL LLVPL+ LPWRL A GSPH+V++++ D GWTLL AMRHHAFWA Sbjct: 181 WRGTYQLFGFAALGLLVPLLLLPWRLFATGSPHVVKRTDPDFIDNGWTLLGAMRHHAFWA 240 Query: 248 LFSTFFFTAIAMYALTAQIVAYLIDVGFPPLQAATAWGFSGVALFVGMLGVSTLDGIIGR 307 LFSTFFFTA+ MYA+ AQIVAYLID GFPPLQAATAWGFSGV L GMLGVS LDG+IGR Sbjct: 241 LFSTFFFTAVGMYAIAAQIVAYLIDAGFPPLQAATAWGFSGVVLVFGMLGVSALDGLIGR 300 Query: 308 RPSVLFSYGVSILGIILLWLLQWYPNYWLLTGFIICFGSMIGSRGPLITATALKIFRGER 367 RPSVL SY +SILGI LLWLLQ+ PN +L+GF++CFGSM+GSRGPLI+ATA++IF+G+R Sbjct: 301 RPSVLLSYAISILGIALLWLLQYVPNILVLSGFVVCFGSMMGSRGPLISATAMRIFQGKR 360 Query: 368 VGTIYGTIMIGSGLGSGLGSWGGGLIHDWTHSYNPLIAFALVNVVLGLIPFLVVPALRR 426 VGTIYGTI IGSGLGS GSW GGLIHD H YN L+AFAL +VVLG+IPFLVVPALRR Sbjct: 361 VGTIYGTISIGSGLGSAFGSWSGGLIHDAAHGYNALLAFALASVVLGMIPFLVVPALRR 419 >ref|YP_001991721.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACF01246.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 405 Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust. Identities = 286/400 (71%), Positives = 333/400 (83%) Query: 27 KQSRVALNVLALCFVLSVLGRGLSDSFTVFLKPISENFGWDRASVVSVYSLTWLASGLTA 86 + SR L +L LCFVLS+LGRGL +SFTVFL PIS +FGWDRA VVS+YSLT L++GL + Sbjct: 4 RASRTGLFILGLCFVLSLLGRGLGESFTVFLLPISASFGWDRAEVVSIYSLTALSTGLAS 63 Query: 87 PLVGRLFDRSGPRVVYALGLSLLGCAFLVASRAQALWQFQLSVGLCVGFGTALIGNVSNS 146 PLVGRLFDRSGPRVVY LG++LLG A L+A+ A+ LWQ QL+VGLCVG G A GNV NS Sbjct: 64 PLVGRLFDRSGPRVVYTLGMTLLGGALLIAAYAERLWQLQLTVGLCVGLGIAFTGNVPNS 123 Query: 147 ILLGRWFGPRLPTAMAVMYSATGAGLLLLLPLSQVLIDRIGWREAYQVFGIGALCLLVPL 206 ILLGRWFG RLPTAMAV+YSA GAG+L++LP++Q+LIDR GWREAY + G L LLVPL Sbjct: 124 ILLGRWFGARLPTAMAVVYSAIGAGVLVMLPIAQLLIDRHGWREAYLILGGAMLILLVPL 183 Query: 207 VFLPWRLLAGGSPHIVRKSESSLADEGWTLLSAMRHHAFWALFSTFFFTAIAMYALTAQI 266 +PWR A G+ ++ D+GWTL SAMRHHAFWALF+TFFFTAI MY+++AQ+ Sbjct: 184 SLMPWRRFAAGADAHAQRPAQDADDDGWTLGSAMRHHAFWALFATFFFTAIGMYSISAQV 243 Query: 267 VAYLIDVGFPPLQAATAWGFSGVALFVGMLGVSTLDGIIGRRPSVLFSYGVSILGIILLW 326 VAYL+D GF PLQAATAWGFSGV L VGMLGVS LDG+IGRRPS+LFSY +SI G++LLW Sbjct: 244 VAYLVDAGFTPLQAATAWGFSGVVLVVGMLGVSWLDGVIGRRPSILFSYAISITGLVLLW 303 Query: 327 LLQWYPNYWLLTGFIICFGSMIGSRGPLITATALKIFRGERVGTIYGTIMIGSGLGSGLG 386 LLQWYPN LL GF+ICFGSMIGSRGPLITATA+ IFRG+RVGTIYGTI IGSGLGS G Sbjct: 304 LLQWYPNLLLLGGFVICFGSMIGSRGPLITATAMSIFRGKRVGTIYGTISIGSGLGSAFG 363 Query: 387 SWGGGLIHDWTHSYNPLIAFALVNVVLGLIPFLVVPALRR 426 SW GGL+HD T SYNP++ FALV+VVLG+IPFLVVPALR Sbjct: 364 SWCGGLLHDLTQSYNPVLGFALVSVVLGMIPFLVVPALRE 403 >ref|NP_947801.1| putative permease [Rhodopseudomonas palustris CGA009] emb|CAE27900.1| putative permease [Rhodopseudomonas palustris CGA009] Length = 405 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 285/400 (71%), Positives = 331/400 (82%) Query: 27 KQSRVALNVLALCFVLSVLGRGLSDSFTVFLKPISENFGWDRASVVSVYSLTWLASGLTA 86 + SR L +L LCFVLS+LGRGL +SFTVFL PIS +FGWDRA VVS+YSLT L +GL + Sbjct: 4 RASRTGLFILGLCFVLSLLGRGLGESFTVFLLPISGSFGWDRAEVVSIYSLTALCTGLAS 63 Query: 87 PLVGRLFDRSGPRVVYALGLSLLGCAFLVASRAQALWQFQLSVGLCVGFGTALIGNVSNS 146 PLVGRLFDRSGPRVVY LG++LLG A L+A+ A+ LWQ QL+VGLCVG G A GNV NS Sbjct: 64 PLVGRLFDRSGPRVVYTLGMTLLGGALLIAAYAERLWQLQLTVGLCVGLGIAFTGNVPNS 123 Query: 147 ILLGRWFGPRLPTAMAVMYSATGAGLLLLLPLSQVLIDRIGWREAYQVFGIGALCLLVPL 206 ILLGRWFG RLPTAMAV+YSA GAG+L++LP++Q+LIDR GWREAY + G L LLVPL Sbjct: 124 ILLGRWFGARLPTAMAVVYSAIGAGVLVMLPIAQLLIDRYGWREAYLILGGAMLILLVPL 183 Query: 207 VFLPWRLLAGGSPHIVRKSESSLADEGWTLLSAMRHHAFWALFSTFFFTAIAMYALTAQI 266 +PWR A G+ ++ ++GWTL SAMRHHAFWALF+TFFFTAI MY+++AQ+ Sbjct: 184 SLMPWRRFAAGADAHAQRPAQDADEDGWTLGSAMRHHAFWALFATFFFTAIGMYSISAQV 243 Query: 267 VAYLIDVGFPPLQAATAWGFSGVALFVGMLGVSTLDGIIGRRPSVLFSYGVSILGIILLW 326 VAYL+D GF PLQAATAWGFSGV L VGMLGVS LDG+IGRRPS+LFSY +SI G++LLW Sbjct: 244 VAYLVDAGFTPLQAATAWGFSGVVLVVGMLGVSWLDGVIGRRPSILFSYAISITGLVLLW 303 Query: 327 LLQWYPNYWLLTGFIICFGSMIGSRGPLITATALKIFRGERVGTIYGTIMIGSGLGSGLG 386 LLQWYPN LL GF+ICFGSMIGSRGPLITATA+ IFRG RVGTIYGTI IGSGLGS G Sbjct: 304 LLQWYPNLLLLGGFVICFGSMIGSRGPLITATAMSIFRGRRVGTIYGTISIGSGLGSAFG 363 Query: 387 SWGGGLIHDWTHSYNPLIAFALVNVVLGLIPFLVVPALRR 426 SW GGL+HD T SYNP++ FALV+VVLG+IPFLVVPALR Sbjct: 364 SWCGGLLHDLTQSYNPVLGFALVSVVLGMIPFLVVPALRE 403 >ref|YP_004109367.1| major facilitator superfamily protein [Rhodopseudomonas palustris DX-1] gb|ADU44634.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris DX-1] Length = 405 Score = 545 bits (1403), Expect = e-153, Method: Compositional matrix adjust. Identities = 282/400 (70%), Positives = 329/400 (82%) Query: 27 KQSRVALNVLALCFVLSVLGRGLSDSFTVFLKPISENFGWDRASVVSVYSLTWLASGLTA 86 + SR L +L LCFVLS+LGRGL +SFTVFL PIS +FGWDRA VVS+YSLT L +GL + Sbjct: 4 RASRTGLFILGLCFVLSLLGRGLGESFTVFLLPISASFGWDRAEVVSIYSLTALCTGLAS 63 Query: 87 PLVGRLFDRSGPRVVYALGLSLLGCAFLVASRAQALWQFQLSVGLCVGFGTALIGNVSNS 146 PLVGRLFDRSGPR VY LG+ LLG AF+VA+ A+ LWQ Q++VGLC G G AL GNV NS Sbjct: 64 PLVGRLFDRSGPRAVYTLGMLLLGGAFVVAAYAERLWQLQITVGLCAGLGIALTGNVPNS 123 Query: 147 ILLGRWFGPRLPTAMAVMYSATGAGLLLLLPLSQVLIDRIGWREAYQVFGIGALCLLVPL 206 ILLGRWFG +LPTAMAV+YSA GAG+L++LP++QVLI+R+GWREAY + G L LL+PL Sbjct: 124 ILLGRWFGAKLPTAMAVVYSAIGAGVLVILPIAQVLIERVGWREAYLMLGGAMLVLLLPL 183 Query: 207 VFLPWRLLAGGSPHIVRKSESSLADEGWTLLSAMRHHAFWALFSTFFFTAIAMYALTAQI 266 LPWR A G+ ++ + D+GWTL SAMRH+AFWALF+TFFFTAI MY++ AQ+ Sbjct: 184 SLLPWRRFAAGADAHAQRPQQDADDDGWTLRSAMRHNAFWALFATFFFTAIGMYSIAAQV 243 Query: 267 VAYLIDVGFPPLQAATAWGFSGVALFVGMLGVSTLDGIIGRRPSVLFSYGVSILGIILLW 326 VAYL+D GF PLQAATAWGFSGV L GMLGVS LDG+IGRRPS+LFSY VSI G+ LLW Sbjct: 244 VAYLVDAGFAPLQAATAWGFSGVVLVAGMLGVSWLDGVIGRRPSILFSYAVSITGLALLW 303 Query: 327 LLQWYPNYWLLTGFIICFGSMIGSRGPLITATALKIFRGERVGTIYGTIMIGSGLGSGLG 386 LLQWYPN LL GF+ICFGSMIGSRGPLITATA+ IFRG+RVGTIYGTI IGSGLGS G Sbjct: 304 LLQWYPNPVLLGGFVICFGSMIGSRGPLITATAMSIFRGKRVGTIYGTIAIGSGLGSAFG 363 Query: 387 SWGGGLIHDWTHSYNPLIAFALVNVVLGLIPFLVVPALRR 426 SW GGL+HD T SYN ++ FALV+VVLG+IPFLVVPALR Sbjct: 364 SWCGGLLHDLTQSYNSVLGFALVSVVLGMIPFLVVPALRE 403 >ref|ZP_08629054.1| major facilitator superfamily protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08413.1| major facilitator superfamily protein [Bradyrhizobiaceae bacterium SG-6C] Length = 412 Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust. Identities = 292/411 (71%), Positives = 342/411 (83%) Query: 16 TPPNDTLATPAKQSRVALNVLALCFVLSVLGRGLSDSFTVFLKPISENFGWDRASVVSVY 75 TP K +ALNVLALCF LSVLGRGL +SFTVFL PIS++ GWDRA V+S+Y Sbjct: 2 TPATPDPKPGMKPVHIALNVLALCFALSVLGRGLGESFTVFLLPISQSSGWDRAEVISIY 61 Query: 76 SLTWLASGLTAPLVGRLFDRSGPRVVYALGLSLLGCAFLVASRAQALWQFQLSVGLCVGF 135 SL LA G AP++GRLFDRSGPR VY+LGL+LLG AFL A+ AQ LWQFQLS+GLC GF Sbjct: 62 SLAALAGGFAAPIIGRLFDRSGPRAVYSLGLALLGGAFLCAAYAQQLWQFQLSLGLCAGF 121 Query: 136 GTALIGNVSNSILLGRWFGPRLPTAMAVMYSATGAGLLLLLPLSQVLIDRIGWREAYQVF 195 G A IGNV NSI+LGRWFGP+LPTAM+V+YSA GAG+LLLLPLSQ+LIDR GWR AYQ+F Sbjct: 122 GIACIGNVPNSIMLGRWFGPKLPTAMSVVYSAAGAGVLLLLPLSQILIDRFGWRGAYQIF 181 Query: 196 GIGALCLLVPLVFLPWRLLAGGSPHIVRKSESSLADEGWTLLSAMRHHAFWALFSTFFFT 255 G AL LL+PL+ LPW+L A GSP + + + + + DEGWTL+ AMRHHAFWALF+TFFFT Sbjct: 182 GTAALVLLLPLLLLPWKLFASGSPVLKKSAAAGMIDEGWTLVRAMRHHAFWALFATFFFT 241 Query: 256 AIAMYALTAQIVAYLIDVGFPPLQAATAWGFSGVALFVGMLGVSTLDGIIGRRPSVLFSY 315 A+ M+A++AQ+VAYL+D GFPPLQAATAWGFSGV L GMLGV+ LDG+IGRR SVLFSY Sbjct: 242 AVGMFAISAQVVAYLVDAGFPPLQAATAWGFSGVVLLFGMLGVTWLDGVIGRRRSVLFSY 301 Query: 316 GVSILGIILLWLLQWYPNYWLLTGFIICFGSMIGSRGPLITATALKIFRGERVGTIYGTI 375 +SI+GI LLWLL+ YPN W+LT F++CFGSMIGSRGPLITATA+KIFRGERVGTIYGTI Sbjct: 302 AMSIVGIGLLWLLKTYPNIWMLTAFVLCFGSMIGSRGPLITATAMKIFRGERVGTIYGTI 361 Query: 376 MIGSGLGSGLGSWGGGLIHDWTHSYNPLIAFALVNVVLGLIPFLVVPALRR 426 IGSGLGS GSW GGLIHD T SY+ L+ FAL++V+LGLIPFLV+ ALR Sbjct: 362 TIGSGLGSSFGSWAGGLIHDMTGSYDALLLFALISVILGLIPFLVIRALRE 412