BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0121.0005.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_781890.1| hypothetical protein RPE_2973 [Rhodopseudomonas... 570 e-160 ref|NP_770965.1| hypothetical protein blr4325 [Bradyrhizobium ja... 555 e-156 ref|YP_577585.1| hypothetical protein Nham_2333 [Nitrobacter ham... 547 e-154 ref|YP_001205536.1| hypothetical protein BRADO3530 [Bradyrhizobi... 546 e-153 ref|YP_569580.1| hypothetical protein RPD_2449 [Rhodopseudomonas... 544 e-152 >ref|YP_781890.1| hypothetical protein RPE_2973 [Rhodopseudomonas palustris BisA53] gb|ABJ06910.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 1247 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 281/392 (71%), Positives = 329/392 (83%), Gaps = 7/392 (1%) Query: 1 MGVEADLTQLKLDNILPGWVKAQGRAGKATFNVVPKGQSTRFEDISIDGAGVSIKGALEV 60 +G+EADLT LKLDNILPGWVK QG+AG+A FNVV K QSTR EDI I+G G SIKG+LE+ Sbjct: 856 LGIEADLTSLKLDNILPGWVKVQGKAGRAVFNVVQKPQSTRLEDIVIEGGGASIKGSLEL 915 Query: 61 DQNGDLMNAYFPTYAPSEGDKTSLRADRGPDGVIKVTMRGDVFDGRGFLKSAISGRDSDP 120 DQ+GDL+NA FPTY+PS+GDK SL+A+R PDGV+KVTMRGDVFDGRGF+KSAISGRDSDP Sbjct: 916 DQDGDLLNANFPTYSPSDGDKASLKAERSPDGVMKVTMRGDVFDGRGFIKSAISGRDSDP 975 Query: 121 KSKTRTTDFDVDLKLGAVAGFNGEALRSVDAKVSRRNGFFKAFTLSGKVGRDTPVTVDMR 180 K+KT++ DFD+D+KLG VAG+ GE +RS+DAK+SRRNG ++F LSGK+GRDTP+ D+R Sbjct: 976 KNKTKSIDFDLDVKLGVVAGYFGETVRSIDAKMSRRNGAIRSFALSGKLGRDTPLNGDLR 1035 Query: 181 GRQQGREVIYLQTSDAGAFLRFIDTYSKVVGGQLTLAMEPPIPEPSPREGLINITGFSVK 240 GR QGREVIYL+TSDAGAF RF DTY K+ GGQL+LAM+PP+ +P REGLIN+ F +K Sbjct: 1036 GRTQGREVIYLETSDAGAFFRFTDTYGKMYGGQLSLAMDPPVSDPREREGLINVRDFVIK 1095 Query: 241 GETQLDRAVAGGPVSTQ----NGIGFDALRAEFTRQSGQLSIRNGVVKGPTIGATIEGSI 296 GETQLDR AG T +G+ F LRAEFTRQ+GQL+IR GVVKGP IGAT+EGSI Sbjct: 1096 GETQLDRVAAGAQAGTAQGVPSGLTFSRLRAEFTRQNGQLNIREGVVKGPMIGATLEGSI 1155 Query: 297 DYIGNQVRMNGTFIPMYGLNNMFGQIPFFGIFLGAGSNEGLIGVTYEVVGTPSAPVLRVN 356 DY NQVRM+GTF+PMYGLNNMFGQIP G+FLG GSNEGLIGVTYEVVGTP APVLRVN Sbjct: 1156 DYPANQVRMSGTFVPMYGLNNMFGQIPIVGLFLGGGSNEGLIGVTYEVVGTPGAPVLRVN 1215 Query: 357 PISALAPGLTRKIFEF---KQYGPNDLPTTNN 385 PISA+APG+ RKIFEF +Q ND P TNN Sbjct: 1216 PISAMAPGVLRKIFEFGTGRQNNQNDFPGTNN 1247 >ref|NP_770965.1| hypothetical protein blr4325 [Bradyrhizobium japonicum USDA 110] dbj|BAC49590.1| blr4325 [Bradyrhizobium japonicum USDA 110] Length = 1279 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 282/393 (71%), Positives = 324/393 (82%), Gaps = 8/393 (2%) Query: 1 MGVEADLTQLKLDNILPGWVKAQGRAGKATFNVVPKGQSTRFEDISIDGAGVSIKGALEV 60 +GVEADLT +KLDNILPGWVK G++GKA+F VVP QSTRFEDI I+G G SIKG+LEV Sbjct: 867 LGVEADLTSVKLDNILPGWVKLPGKSGKASFKVVPTAQSTRFEDIVIEGGGASIKGSLEV 926 Query: 61 DQNGDLMNAYFPTYAPSEGDKTSLRADRGPDGVIKVTMRGDVFDGRGFLKSAISGRDSD- 119 D NGDLMNA FP YAPS+GDK SL+ +R DGV++ TMRGDVFDGRGFLKSAISG D Sbjct: 927 DPNGDLMNANFPIYAPSDGDKASLKVERSQDGVVRGTMRGDVFDGRGFLKSAISGNSKDD 986 Query: 120 PKSKTRTTDFDVDLKLGAVAGFNGEALRSVDAKVSRRNGFFKAFTLSGKVGRDTPVTVDM 179 KSK + DFD+D+KLGAVAGFNGEA+RSVDAK+SRR+G KAFTLSGK+GRDTPV D+ Sbjct: 987 AKSKMKNVDFDIDVKLGAVAGFNGEAMRSVDAKMSRRSGAVKAFTLSGKIGRDTPVAADL 1046 Query: 180 RG-RQQG-REVIYLQTSDAGAFLRFIDTYSKVVGGQLTLAMEPPIPEPSPREGLINITGF 237 RG R QG REVIYLQT+DAGA LRF DT +KV GGQ+ +AMEPP EP+ REGLIN+ F Sbjct: 1047 RGGRAQGAREVIYLQTNDAGALLRFTDTTNKVFGGQMVVAMEPPTSEPTTREGLINVRDF 1106 Query: 238 SVKGETQLDRAVAGGPVSTQNGIGFDALRAEFTRQSGQLSIRNGVVKGPTIGATIEGSID 297 +VKG QLDR AGGP Q+G+ F ALRAEFTRQ+G L+IR+GVVKGP IG TIEGSID Sbjct: 1107 TVKGMDQLDRVAAGGPNGAQSGVSFTALRAEFTRQNGALTIRDGVVKGPMIGGTIEGSID 1166 Query: 298 YIGNQVRMNGTFIPMYGLNNMFGQIPFFGIFLGAGSNEGLIGVTYEVVGTPSAPVLRVNP 357 Y GNQV M+GTF+PMYG+NN+FGQIP FGIFLG G+NEGLIGVTYEVVGTP+APV+RVNP Sbjct: 1167 YPGNQVCMSGTFVPMYGVNNIFGQIPLFGIFLGGGNNEGLIGVTYEVVGTPAAPVMRVNP 1226 Query: 358 ISALAPGLTRKIFEF---KQYGPND--LPTTNN 385 ISA+APGL RKIFEF KQ P D LP+ + Sbjct: 1227 ISAMAPGLFRKIFEFNTGKQNTPFDEQLPSAQS 1259 >ref|YP_577585.1| hypothetical protein Nham_2333 [Nitrobacter hamburgensis X14] gb|ABE63125.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 1255 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 260/377 (68%), Positives = 311/377 (82%) Query: 1 MGVEADLTQLKLDNILPGWVKAQGRAGKATFNVVPKGQSTRFEDISIDGAGVSIKGALEV 60 +G++ADLT LKLDN+LPGWVK G++G ATFNVV K QSTR EDI IDG G IKG+LE+ Sbjct: 867 IGIDADLTSLKLDNVLPGWVKLPGKSGHATFNVVQKAQSTRLEDIVIDGGGAMIKGSLEI 926 Query: 61 DQNGDLMNAYFPTYAPSEGDKTSLRADRGPDGVIKVTMRGDVFDGRGFLKSAISGRDSDP 120 DQNGDL+NA FP YAPSEGDK SL+A+R DGV+KV MRGDVFDGRGF+KSAISG+ +D Sbjct: 927 DQNGDLLNANFPVYAPSEGDKASLKAERNADGVLKVVMRGDVFDGRGFIKSAISGKQADT 986 Query: 121 KSKTRTTDFDVDLKLGAVAGFNGEALRSVDAKVSRRNGFFKAFTLSGKVGRDTPVTVDMR 180 K K ++ DFD+DLKLGAVAGF GEA+RS D K++RRNG ++ T+SGK+GRDT +T +R Sbjct: 987 KGKAKSIDFDIDLKLGAVAGFYGEAVRSADVKMARRNGSIRSLTMSGKIGRDTSLTGGLR 1046 Query: 181 GRQQGREVIYLQTSDAGAFLRFIDTYSKVVGGQLTLAMEPPIPEPSPREGLINITGFSVK 240 GR QGR++I ++T DAGAF RF DTY K+ GG+L LAM+PP EP ++GLIN+ F++K Sbjct: 1047 GRPQGRDIILIETDDAGAFFRFTDTYGKMFGGELALAMDPPTAEPRAKQGLINVRDFTIK 1106 Query: 241 GETQLDRAVAGGPVSTQNGIGFDALRAEFTRQSGQLSIRNGVVKGPTIGATIEGSIDYIG 300 GET LDRA AGGP QNGI F LRAEFTRQ+GQL++R GVVKGPTIGATIEG ID+ G Sbjct: 1107 GETALDRAAAGGPQGAQNGISFSRLRAEFTRQNGQLTVREGVVKGPTIGATIEGHIDFPG 1166 Query: 301 NQVRMNGTFIPMYGLNNMFGQIPFFGIFLGAGSNEGLIGVTYEVVGTPSAPVLRVNPISA 360 NQVRM+GTF+PMYGLNN+FGQ+P G+FLG GSNEGLIGVTYEVVGTP P LRVNPISA Sbjct: 1167 NQVRMSGTFVPMYGLNNIFGQLPIVGLFLGGGSNEGLIGVTYEVVGTPGQPQLRVNPISA 1226 Query: 361 LAPGLTRKIFEFKQYGP 377 +APG+ RKIFEF+ P Sbjct: 1227 MAPGVLRKIFEFQTGKP 1243 >ref|YP_001205536.1| hypothetical protein BRADO3530 [Bradyrhizobium sp. ORS 278] emb|CAL77310.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 1232 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 282/400 (70%), Positives = 329/400 (82%), Gaps = 16/400 (4%) Query: 1 MGVEADLTQLKLDNILPGWVKAQGRAGKATFNVVPKGQSTRFEDISIDGAGVSIKGALEV 60 +GVEADL++LKLDN+LPGWVK G+AGKATFNVV K QSTRFEDI+I+G GVSIKG+LE+ Sbjct: 833 IGVEADLSKLKLDNLLPGWVKTPGKAGKATFNVVAKPQSTRFEDINIEGGGVSIKGSLEI 892 Query: 61 DQNGDLMNAYFPTYAPSEGDKTSLRADRGPDGVIKVTMRGDVFDGRGFLKSAISGRDSDP 120 DQNGDLMNA FPTY+PSEGDKT ++A+RG DGV+K+TMRGDVFDGRGFLKSAISG + D Sbjct: 893 DQNGDLMNANFPTYSPSEGDKTQIKAERGQDGVLKLTMRGDVFDGRGFLKSAISGTNKDA 952 Query: 121 -KSKTRT-TDFDVDLKLGAVAGFNGEALRSVDAKVSRRNGFFKAFTLSGKVGRDTPVTVD 178 K+K+R+ DFD ++KLGAVAGFNGEALR VDAKVSRR G FKAFTLSGKVGRDTPVT D Sbjct: 953 DKNKSRSNVDFDAEIKLGAVAGFNGEALRGVDAKVSRRGGAFKAFTLSGKVGRDTPVTAD 1012 Query: 179 M--------RGRQQGREVIYLQTSDAGAFLRFIDTYSKVVGGQLTLAMEPPIPEPSPREG 230 + RGR+QGREVIYL T+DAGA LRF DTYSKV GGQL LA+EPP +P P+EG Sbjct: 1013 LRVGREADQRGRRQGREVIYLTTNDAGALLRFADTYSKVQGGQLELALEPPTADPGPKEG 1072 Query: 231 LINITGFSVKGETQLDRAVA--GGPVSTQNGIGFDALRAEFTRQSGQLSIRNGVVKGPTI 288 LIN+ F+V+GE QLDRAVA +GIGF ALRAEFTRQ G +S R+G+V+GPTI Sbjct: 1073 LINMRDFTVRGEQQLDRAVAGGTQGGGQGSGIGFTALRAEFTRQPGLMSFRDGIVQGPTI 1132 Query: 289 GATIEGSIDYIGNQVRMNGTFIPMYGLNNMFGQIPFFGIFLGAGSNEGLIGVTYEVVGTP 348 G TIEG+IDY NQVRMNGT +P YGLNN+FGQIPFFG+ LG G+ EGLIGVTYEVVGTP Sbjct: 1133 GLTIEGNIDYNNNQVRMNGTIVPAYGLNNIFGQIPFFGLILGNGNKEGLIGVTYEVVGTP 1192 Query: 349 SAPVLRVNPISALAPGLTRKIFEF----KQYGPNDLPTTN 384 SAPV+RVNPISA+APG+ R IF+F + Y P ++ N Sbjct: 1193 SAPVMRVNPISAMAPGVFRNIFQFNTGRQTYPPAEIAPNN 1232 >ref|YP_569580.1| hypothetical protein RPD_2449 [Rhodopseudomonas palustris BisB5] gb|ABE39679.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 1243 Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust. Identities = 272/388 (70%), Positives = 323/388 (83%), Gaps = 3/388 (0%) Query: 1 MGVEADLTQLKLDNILPGWVKAQGRAGKATFNVVPKGQSTRFEDISIDGAGVSIKGALEV 60 +G++ADLT +KLDN+LPGW K G+A +A+FNV+ KGQSTRFEDI ++G+G IKGALEV Sbjct: 856 LGIDADLTAVKLDNVLPGWTKPPGKAARASFNVLQKGQSTRFEDIQVEGSGTLIKGALEV 915 Query: 61 DQNGDLMNAYFPTYAPSEGDKTSLRADRGPDGVIKVTMRGDVFDGRGFLKSAISGRDSDP 120 DQ+GDL+NA FP Y+PSEGDKT+L+ADRG DGV+KV MRGDVFDGRG +KSA+SG SDP Sbjct: 916 DQDGDLINATFPVYSPSEGDKTTLKADRGQDGVLKVVMRGDVFDGRGVIKSALSGTQSDP 975 Query: 121 KSKTRTTDFDVDLKLGAVAGFNGEALRSVDAKVSRRNGFFKAFTLSGKVGRDTPVTVDMR 180 KSKT+ DFD+DLKLGAVAGF GEALRSVD K+ RRNG F+ F L+GK+GRDTP+T ++R Sbjct: 976 KSKTKGIDFDLDLKLGAVAGFYGEALRSVDVKLVRRNGAFRTFNLAGKLGRDTPITAELR 1035 Query: 181 GRQQGREVIYLQTSDAGAFLRFIDTYSKVVGGQLTLAMEPPIPEPSPREGLINITGFSVK 240 G+ +GREVIYL+T+DAG+F RF DTYSK+ GGQL LA+EPP EP +EGLIN+ F+VK Sbjct: 1036 GKNRGREVIYLETNDAGSFFRFSDTYSKIYGGQLALAVEPPTVEPREKEGLINVRDFTVK 1095 Query: 241 GETQLDRAVAGGPVSTQNGIGFDALRAEFTRQSGQLSIRNGVVKGPTIGATIEGSIDYIG 300 GE L+RA AG P T G+ F LRAEFTRQ+GQL++R+GVVKGPTIGATIEGSIDY Sbjct: 1096 GEAALERAAAGAPGGTSAGLAFSRLRAEFTRQNGQLTVRDGVVKGPTIGATIEGSIDYPA 1155 Query: 301 NQVRMNGTFIPMYGLNNMFGQIPFFGIFLGAGSNEGLIGVTYEVVGTPSAPVLRVNPISA 360 NQVRM+GTF+PMYGLNNMFGQIP G+FLG GSNEGLIGVTYEVVGTP PVLRVNPISA Sbjct: 1156 NQVRMSGTFVPMYGLNNMFGQIPIVGLFLGGGSNEGLIGVTYEVVGTPGQPVLRVNPISA 1215 Query: 361 LAPGLTRKIFEF---KQYGPNDLPTTNN 385 +APG+ RKIFEF +Q D PT N Sbjct: 1216 MAPGVLRKIFEFNTGRQNNGVDFPTPPN 1243