BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0121.0001.p (263 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770963.1| hypothetical protein bll4323 [Bradyrhizobium ja... 334 8e-90 ref|YP_001239931.1| putative metalloendopeptidase [Bradyrhizobiu... 315 5e-84 ref|YP_486616.1| peptidase M23B [Rhodopseudomonas palustris HaA2... 309 3e-82 ref|YP_569578.1| peptidase M23B [Rhodopseudomonas palustris BisB... 308 4e-82 ref|YP_781892.1| peptidase M23B [Rhodopseudomonas palustris BisA... 303 2e-80 >ref|NP_770963.1| hypothetical protein bll4323 [Bradyrhizobium japonicum USDA 110] dbj|BAC49588.1| bll4323 [Bradyrhizobium japonicum USDA 110] Length = 457 Score = 334 bits (857), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 186/264 (70%), Positives = 204/264 (77%), Gaps = 19/264 (7%) Query: 3 SRSGHHQEHHKHHHPQDHGRTPARRPAAHHPAPAAAAVAASGEGYTLVHAGKQVRFGPVV 62 S+S + HHP DHGR RRPAA A A + A+ + YT+VHAGKQVRFGPVV Sbjct: 4 SKSSAQYSQYPQHHPHDHGRALHRRPAAATAA-IAIPLPATDDAYTIVHAGKQVRFGPVV 62 Query: 63 FWIIVGTVVLLGMWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRISELRAKVDRTTSR 122 FWI+VGTVVLLG+WSAATATYFAFRDDVLTRLIARQAEMQYAYEDRI+ELRAKVDRTTSR Sbjct: 63 FWIVVGTVVLLGLWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRIAELRAKVDRTTSR 122 Query: 123 QLLDQEQFDQKLDQIMKRQSTLESRATALGAMPDVTSTGSI---KPQ-GRAEAAPSSGPL 178 QLLDQEQFDQKLDQIMKRQ+ LESRATALGAMPDV TGSI PQ G A + + G Sbjct: 123 QLLDQEQFDQKLDQIMKRQTALESRATALGAMPDV--TGSIPRSTPQRGDAGQSTTQGTP 180 Query: 179 KPSPISDTVIFV--------LESRAPLIAKTQPNQFAKAQGVDNVLVRLQTSLDQVERRQ 230 KPSPISDTVIFV LESRAP + Q NQFAK QG DNVLVRL TSLDQVERRQ Sbjct: 181 KPSPISDTVIFVAPPDREARLESRAPAVMAPQANQFAKNQGFDNVLVRLTTSLDQVERRQ 240 Query: 231 VAALASVEDSIDSKVXDRLRRRRA 254 +AAL++VED +DS R+RR R Sbjct: 241 MAALSAVEDGMDS----RMRRMRG 260 >ref|YP_001239931.1| putative metalloendopeptidase [Bradyrhizobium sp. BTAi1] gb|ABQ36025.1| putative metalloendopeptidase [Bradyrhizobium sp. BTAi1] Length = 453 Score = 315 bits (807), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 175/266 (65%), Positives = 198/266 (74%), Gaps = 22/266 (8%) Query: 1 MSSRSGHHQEHHKHHHPQDHGR-TPARRPAAHHPAPAAAAVAASGEGYTLVHAGKQVRFG 59 MS RSG + E+ +HH D GR RR HPAPA A S YTLVHAG+QVR G Sbjct: 1 MSHRSGQYAEYPQHHS-HDRGRAVQQRRSPVGHPAPAPAT---SQSDYTLVHAGRQVRIG 56 Query: 60 PVVFWIIVGTVVLLGMWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRISELRAKVDRT 119 PVVFWI+VGTV LLG+WSAATATYFAFRDDVLTRLIARQAEMQYAYEDRI+ELRAKVDR Sbjct: 57 PVVFWIVVGTVSLLGLWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRIAELRAKVDRA 116 Query: 120 TSRQLLDQEQFDQKLDQIMKRQSTLESRATALGAMPDVTSTGSIKPQGRAEA-APSSGPL 178 TSRQLLDQEQFDQKLDQI+KRQ+ LE RATALG++PDV TG+I+P R A PS+ P Sbjct: 117 TSRQLLDQEQFDQKLDQILKRQTALEGRATALGSIPDV--TGAIRPPARGPAIEPSAAPA 174 Query: 179 --KPSPISDTVIFV--------LESRAPLIAKTQPNQFAKAQGVDNVLVRLQTSLDQVER 228 KPSPISDTVIF LESR+P++A QPNQ K GVDNVL RL SLDQVE Sbjct: 175 TPKPSPISDTVIFTAPPDREARLESRSPVLANVQPNQATKLAGVDNVLTRLTRSLDQVEA 234 Query: 229 RQVAALASVEDSIDSKVXDRLRRRRA 254 RQ+A L+S E++++SK LRR R Sbjct: 235 RQLAMLSSAEETLESK----LRRMRG 256 >ref|YP_486616.1| peptidase M23B [Rhodopseudomonas palustris HaA2] gb|ABD07705.1| Peptidase M23B [Rhodopseudomonas palustris HaA2] Length = 457 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 167/265 (63%), Positives = 193/265 (72%), Gaps = 18/265 (6%) Query: 1 MSSRSGHHQEHHKHHHPQDHGRTPARRPAAHHPAPAAAAVAASGEGYTLVHAGKQVRFGP 60 M RSGHH +H +HH P HGR R P P +AA YT HAG+QVR GP Sbjct: 1 MPYRSGHHSDHPQHHAPH-HGRQAPYRARRPQPGPQPQ-IAAEASSYTFAHAGRQVRIGP 58 Query: 61 VVFWIIVGTVVLLGMWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRISELRAKVDRTT 120 V+FWI+VGT+V LG WSAATATYFAFRDDVLTRLIARQAEMQYAYEDRI+ELRAKVDRTT Sbjct: 59 VLFWIVVGTIVALGCWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRIAELRAKVDRTT 118 Query: 121 SRQLLDQEQFDQKLDQIMKRQSTLESRATALGAMPDVTSTGSIKPQGRAEAAPSS--GPL 178 SRQLLDQEQFDQKLDQ+M+RQ+ LESRA+A+ +PDV TGSIK R A S+ GPL Sbjct: 119 SRQLLDQEQFDQKLDQVMRRQTMLESRASAMSTLPDVAVTGSIK-SSRTPAPDSTPAGPL 177 Query: 179 KPSPISDTVIFV--------LESRAPLIAKTQP-NQFAKAQGVDNVLVRLQTSLDQVERR 229 KPSPI+DTVIFV LESR+P A + P Q+AKAQG+D L +L+ SLDQVE+R Sbjct: 178 KPSPINDTVIFVAPPDREARLESRSPAAAPSLPTTQYAKAQGLDTALTKLEQSLDQVEKR 237 Query: 230 QVAALASVEDSIDSKVXDRLRRRRA 254 Q+A L SVE+S +S R RR R Sbjct: 238 QIATLGSVEESFES----RARRMRG 258 >ref|YP_569578.1| peptidase M23B [Rhodopseudomonas palustris BisB5] gb|ABE39677.1| peptidase M23B [Rhodopseudomonas palustris BisB5] Length = 459 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 172/269 (63%), Positives = 200/269 (74%), Gaps = 24/269 (8%) Query: 1 MSSRSGHHQEHHKHHHPQDHGRTP---ARRP-AAHHPAPAAAAVAASGEGYTLVHAGKQV 56 MS RSGH EHH +H P ++GR A+RP P+P A A+S YT+ HAGKQV Sbjct: 1 MSYRSGHPSEHHPNHAP-NYGRPQPHRAQRPHPGQRPSPEVPAEASS---YTIAHAGKQV 56 Query: 57 RFGPVVFWIIVGTVVLLGMWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRISELRAKV 116 R GPVVFWI+VGT+V LG WSAATATYFAFRDDVLTRLIARQAEMQYAYEDRI+ELRAKV Sbjct: 57 RIGPVVFWIVVGTIVALGCWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRIAELRAKV 116 Query: 117 DRTTSRQLLDQEQFDQKLDQIMKRQSTLESRATALGAMPDVTSTGSIKPQ--GRAEAAPS 174 DRTTSRQLLDQEQFDQKLDQ+M+RQ+ LESRA+AL +PDV TGSIK + AP Sbjct: 117 DRTTSRQLLDQEQFDQKLDQVMRRQTMLESRASALNTLPDVVVTGSIKSSRTPSTDTAP- 175 Query: 175 SGPLKPSPISDTVIFV--------LESRAPLIAKTQP-NQFAKAQGVDNVLVRLQTSLDQ 225 +GPLKPSPI+DTVIFV LESR+P A P Q+AKAQG+D L +L+ SLDQ Sbjct: 176 AGPLKPSPINDTVIFVAPPDREARLESRSPAAAPALPTTQYAKAQGLDTALSKLEQSLDQ 235 Query: 226 VERRQVAALASVEDSIDSKVXDRLRRRRA 254 VE+RQ+AAL SVE+S ++ R RR R Sbjct: 236 VEKRQIAALGSVEESYET----RARRMRG 260 >ref|YP_781892.1| peptidase M23B [Rhodopseudomonas palustris BisA53] gb|ABJ06912.1| peptidase M23B [Rhodopseudomonas palustris BisA53] Length = 455 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 177/269 (65%), Positives = 196/269 (72%), Gaps = 27/269 (10%) Query: 1 MSSRSGHHQEHHKHHHPQDHGRTPARRPAAHHPAPAAAAV---AASGEGYTLVHAGKQVR 57 MS SG + E HHH DHGR AA HP+ A A+ GY +VHAGKQVR Sbjct: 1 MSHHSGPYSES-LHHHGHDHGR------AAQHPSAKIHAKRHQPAARNGYAIVHAGKQVR 53 Query: 58 FGPVVFWIIVGTVVLLGMWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRISELRAKVD 117 FGPVVFWI+VGT+VLLG+WSAATATYFAFRDDVLTRLIARQAEMQYAYEDRI+ELRAKVD Sbjct: 54 FGPVVFWIVVGTIVLLGIWSAATATYFAFRDDVLTRLIARQAEMQYAYEDRIAELRAKVD 113 Query: 118 RTTSRQLLDQEQFDQKLDQIMKRQSTLESRATALGAMPDVTSTGSI-KPQGRAEAAP--S 174 RTTSRQLLDQEQFDQKLDQ+M+RQ+ LESR+ ALG++PD+ TGSI KP A AA S Sbjct: 114 RTTSRQLLDQEQFDQKLDQVMRRQNQLESRSNALGSLPDLGITGSIGKPPRAAPAADLGS 173 Query: 175 SGPLKPSPISDTVIFV--------LESR-APLIAKTQPNQFAKAQGVDNVLVRLQTSLDQ 225 SG KPSPISDTV+F LESR AP+IA P Q AK QGVD V+ RLQ SLDQ Sbjct: 174 SGIPKPSPISDTVVFTAPPDREARLESRTAPVIAPA-PTQLAKHQGVDTVITRLQRSLDQ 232 Query: 226 VERRQVAALASVEDSIDSKVXDRLRRRRA 254 VE RQVA L VEDS +S R RR R Sbjct: 233 VETRQVAVLGLVEDSFES----RARRMRG 257