BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0130.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769194.1| glycine cleavage system T protein, aminomethylt... 468 e-130 ref|YP_579148.1| glycine cleavage T protein (aminomethyl transfe... 418 e-115 ref|YP_319309.1| glycine cleavage T protein (aminomethyl transfe... 413 e-113 ref|ZP_01045351.1| Glycine cleavage T protein (aminomethyl trans... 411 e-113 ref|YP_568377.1| glycine cleavage T protein (aminomethyl transfe... 405 e-111 >ref|NP_769194.1| glycine cleavage system T protein, aminomethyltransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC47819.1| glycine cleavage system T protein, aminomethyltransferase [Bradyrhizobium japonicum USDA 110] Length = 293 Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust. Identities = 236/293 (80%), Positives = 256/293 (87%) Query: 3 MKAAFLPDRGVVKVSGEDARNFLNGLITADIAELRAGQARFGALLTPQGKIIVDFLITEI 62 MK+AFLPDRGVVKV+GEDARNFLNGL+T D+ L+ G RFGALLTPQGKIIVDFLITE+ Sbjct: 1 MKSAFLPDRGVVKVAGEDARNFLNGLVTTDLDRLKPGLGRFGALLTPQGKIIVDFLITEV 60 Query: 63 PAGHGGGFLIDAPRALAKGLADKLGFYKLRAKVVVENLSDSLGVLAAWDGEPVATPDLAF 122 PAGHGGGFLID P+ALA+GLA KL FYKLRAK VENLSD LGVLAAWDG A PDLAF Sbjct: 61 PAGHGGGFLIDCPKALAEGLATKLKFYKLRAKATVENLSDDLGVLAAWDGALAAQPDLAF 120 Query: 123 ADPRTPTLGWRILIPEDLKQKLAELIGADLVDPGAYEAHRIATGVPRGGLDFMYGDAFPH 182 ADPR LG RILIPEDLKQKL++LIGA+LVD AYEAHRIA GVPRGGLDFMY DAFPH Sbjct: 121 ADPRHDGLGTRILIPEDLKQKLSDLIGAELVDAAAYEAHRIALGVPRGGLDFMYSDAFPH 180 Query: 183 ETNMDRLSGVDFDKGCYVGQEVVSRMQHRGTARTRTVKIILDGPAPEAGATILAGDKQVG 242 ETNMDRL+GVDFDKGCYVGQEVVSRMQHRGTARTR+VK++LDGP+PE GA ILAGDK VG Sbjct: 181 ETNMDRLAGVDFDKGCYVGQEVVSRMQHRGTARTRSVKVLLDGPSPEIGAAILAGDKPVG 240 Query: 243 TIGSTAGEKGLALVRIDRVADALDAGLALTAGGLSLHLAEPDAVRITPKQTVA 295 TIGS+A KG+ALVRIDRVADALDAG LTAGGL+L LAEP+ VRI KQ A Sbjct: 241 TIGSSADGKGIALVRIDRVADALDAGQPLTAGGLALTLAEPEVVRIPAKQPTA 293 >ref|YP_579148.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter hamburgensis X14] gb|ABE64688.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter hamburgensis X14] Length = 293 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/293 (68%), Positives = 242/293 (82%) Query: 3 MKAAFLPDRGVVKVSGEDARNFLNGLITADIAELRAGQARFGALLTPQGKIIVDFLITEI 62 MKAAFLPDRGVVKVSG+DARNFLNGL+T D+ +++ G RFGALLTPQGKI DFLITE Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKIQPGFGRFGALLTPQGKITFDFLITEA 60 Query: 63 PAGHGGGFLIDAPRALAKGLADKLGFYKLRAKVVVENLSDSLGVLAAWDGEPVATPDLAF 122 GHGGGFLID P +LA+ LA KLGFYKLRAKV V+N+S +LGVLAAWDGEP PDL F Sbjct: 61 QPGHGGGFLIDCPLSLAQSLATKLGFYKLRAKVTVDNISSTLGVLAAWDGEPAMKPDLTF 120 Query: 123 ADPRTPTLGWRILIPEDLKQKLAELIGADLVDPGAYEAHRIATGVPRGGLDFMYGDAFPH 182 ADPR+ LGWRIL PE+L + A +IGA+LV+ Y+AHRIA GVP GG DFM+GDAFPH Sbjct: 121 ADPRSDRLGWRILAPEELATRAATVIGAELVESADYDAHRIAAGVPSGGTDFMFGDAFPH 180 Query: 183 ETNMDRLSGVDFDKGCYVGQEVVSRMQHRGTARTRTVKIILDGPAPEAGATILAGDKQVG 242 E NMDRL GVDFDKGCYVGQEVVSRM+HRGTAR+R V+++LD AP+AG I+A DK VG Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVLLDDGAPDAGTAIVAADKSVG 240 Query: 243 TIGSTAGEKGLALVRIDRVADALDAGLALTAGGLSLHLAEPDAVRITPKQTVA 295 T+GS+A +GLAL+R+DR ADA++AG+ALTAGG+ + +A+PD +++ K TVA Sbjct: 241 TMGSSAASQGLALLRLDRAADAIEAGIALTAGGIPIRVADPDDLKLPAKTTVA 293 >ref|YP_319309.1| glycine cleavage T protein (aminomethyl transferase) [Nitrobacter winogradskyi Nb-255] gb|ABA05957.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter winogradskyi Nb-255] Length = 293 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 202/293 (68%), Positives = 238/293 (81%) Query: 3 MKAAFLPDRGVVKVSGEDARNFLNGLITADIAELRAGQARFGALLTPQGKIIVDFLITEI 62 MKAAFLPDRGVVKVSG+DARNFLNGL+T D+ +++ G RFGALLTPQGKI VDFLITE Sbjct: 1 MKAAFLPDRGVVKVSGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKITVDFLITEA 60 Query: 63 PAGHGGGFLIDAPRALAKGLADKLGFYKLRAKVVVENLSDSLGVLAAWDGEPVATPDLAF 122 GHGGGFLID P LA+ LA KLGFYKLRAKV VENLS LGVLAAWDGEP PDL F Sbjct: 61 QPGHGGGFLIDCPLPLAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120 Query: 123 ADPRTPTLGWRILIPEDLKQKLAELIGADLVDPGAYEAHRIATGVPRGGLDFMYGDAFPH 182 ADPR+ LGWR L+PE+L + A +IGA+LV+ YEAHRI GVP GG DF +GDAFPH Sbjct: 121 ADPRSDRLGWRSLVPEELAARAATVIGAELVESADYEAHRIRAGVPSGGADFNFGDAFPH 180 Query: 183 ETNMDRLSGVDFDKGCYVGQEVVSRMQHRGTARTRTVKIILDGPAPEAGATILAGDKQVG 242 E NMDRL GVDFDKGCYVGQEVVSRM+HRGTAR R V++ LDG APE G ++AG+K VG Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARNRIVRVHLDGGAPEPGTAVVAGEKPVG 240 Query: 243 TIGSTAGEKGLALVRIDRVADALDAGLALTAGGLSLHLAEPDAVRITPKQTVA 295 T+GS+A ++GLAL+R+DR ADA++AG+ LTAGG+ + +AEPD +++ K TVA Sbjct: 241 TMGSSAADQGLALLRLDRAADAIEAGIPLTAGGVPIRVAEPDELKLPAKNTVA 293 >ref|ZP_01045351.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter sp. Nb-311A] gb|EAQ36679.1| Glycine cleavage T protein (aminomethyl transferase) [Nitrobacter sp. Nb-311A] Length = 293 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/292 (68%), Positives = 238/292 (81%) Query: 3 MKAAFLPDRGVVKVSGEDARNFLNGLITADIAELRAGQARFGALLTPQGKIIVDFLITEI 62 MKAAFLPDRGVVKV G+DARNFLNGL+T D+ +++ G RFGALLTPQGKII DFLITE Sbjct: 1 MKAAFLPDRGVVKVIGDDARNFLNGLVTTDVTKVQPGLGRFGALLTPQGKIIFDFLITEA 60 Query: 63 PAGHGGGFLIDAPRALAKGLADKLGFYKLRAKVVVENLSDSLGVLAAWDGEPVATPDLAF 122 GHGGGFLID P ALA+ LA KLGFYKLRAKV VENLS LGVLAAWDGEP PDL F Sbjct: 61 QPGHGGGFLIDCPLALAQPLATKLGFYKLRAKVTVENLSGKLGVLAAWDGEPAMHPDLTF 120 Query: 123 ADPRTPTLGWRILIPEDLKQKLAELIGADLVDPGAYEAHRIATGVPRGGLDFMYGDAFPH 182 ADPR+ LGWRIL PE+L + A +IGA+LV+ YEAHRIA G+P GG DF +GDAFPH Sbjct: 121 ADPRSDKLGWRILAPEELAGRAATVIGAELVESADYEAHRIAAGIPSGGNDFKFGDAFPH 180 Query: 183 ETNMDRLSGVDFDKGCYVGQEVVSRMQHRGTARTRTVKIILDGPAPEAGATILAGDKQVG 242 E NMDRL GVDFDKGCYVGQEVVSRM+HRGTAR+R V++ LD APE G ++AG+K VG Sbjct: 181 EANMDRLHGVDFDKGCYVGQEVVSRMEHRGTARSRIVRVRLDAGAPEPGTAVVAGEKAVG 240 Query: 243 TIGSTAGEKGLALVRIDRVADALDAGLALTAGGLSLHLAEPDAVRITPKQTV 294 T+GS+A ++GLAL+R+DR ADA++AG+ LTAG + +H+AEPD +++ K TV Sbjct: 241 TMGSSAADQGLALLRLDRAADAIEAGIPLTAGDIPIHVAEPDDLKLPAKNTV 292 >ref|YP_568377.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB5] gb|ABE38476.1| glycine cleavage T protein (aminomethyl transferase) [Rhodopseudomonas palustris BisB5] Length = 293 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 202/293 (68%), Positives = 236/293 (80%) Query: 3 MKAAFLPDRGVVKVSGEDARNFLNGLITADIAELRAGQARFGALLTPQGKIIVDFLITEI 62 MKAAFLPDRGV+K+SG DAR+ LNGL+T D+ L+ G RFGALLTPQGKI+ DFLITE Sbjct: 1 MKAAFLPDRGVIKISGADARHLLNGLVTTDLTLLKPGLGRFGALLTPQGKIVADFLITEG 60 Query: 63 PAGHGGGFLIDAPRALAKGLADKLGFYKLRAKVVVENLSDSLGVLAAWDGEPVATPDLAF 122 A GGFLID P+ALA+ LADKL FYKLRAKV++ENLSD LGVLAAW G P TP+LAF Sbjct: 61 AAADDGGFLIDCPKALAQPLADKLKFYKLRAKVLIENLSDRLGVLAAWGGAPAETPELAF 120 Query: 123 ADPRTPTLGWRILIPEDLKQKLAELIGADLVDPGAYEAHRIATGVPRGGLDFMYGDAFPH 182 ADPR LGWRI+ PE L QK A IGA+LVD AYEAHRIA G P GG+DF YGDAFPH Sbjct: 121 ADPRHDDLGWRIITPELLAQKTAAAIGAELVDVAAYEAHRIACGAPAGGVDFAYGDAFPH 180 Query: 183 ETNMDRLSGVDFDKGCYVGQEVVSRMQHRGTARTRTVKIILDGPAPEAGATILAGDKQVG 242 E+NMDRL GVDF KGCY+GQEVVSRM HRGTARTR V+++LDG PEAGA I+AG+K VG Sbjct: 181 ESNMDRLHGVDFGKGCYIGQEVVSRMHHRGTARTRIVRVLLDGAGPEAGAEIIAGEKSVG 240 Query: 243 TIGSTAGEKGLALVRIDRVADALDAGLALTAGGLSLHLAEPDAVRITPKQTVA 295 T+GS+ GLAL+RIDRVADA DA L ++AGG++L LA+PD ++ ++TVA Sbjct: 241 TMGSSVDGHGLALLRIDRVADARDASLPISAGGITLRLADPDELKPITRRTVA 293