BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0129.p (586 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769195.1| dihydroorotase [Bradyrhizobium japonicum USDA 1... 711 0.0 ref|YP_579147.1| dihydroorotase [Nitrobacter hamburgensis X14] >... 687 0.0 ref|ZP_08628707.1| dihydroorotase [Bradyrhizobiaceae bacterium S... 685 0.0 ref|YP_319308.1| dihydroorotase [Nitrobacter winogradskyi Nb-255... 682 0.0 ref|ZP_01045350.1| dihydroorotase [Nitrobacter sp. Nb-311A] >gi|... 682 0.0 >ref|NP_769195.1| dihydroorotase [Bradyrhizobium japonicum USDA 110] dbj|BAC47820.1| dihydroorotase [Bradyrhizobium japonicum USDA 110] Length = 444 Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/377 (90%), Positives = 354/377 (93%) Query: 1 MNQHFDTILKSGTVVNQDGEGVRDIGIAGGRIAAIGSLGQASAGEVIDCKGLHILPGVMD 60 M Q FD IL+ GTVVNQDGEG+RDIGIA GRIA IG+L QASA EVIDCKGLHILPGVMD Sbjct: 1 MTQRFDVILRGGTVVNQDGEGLRDIGIASGRIAEIGALSQASAAEVIDCKGLHILPGVMD 60 Query: 61 TQVHFREPGLTQKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEEAFTDKIKRGRHRMHC 120 TQVHFREPGL QKEDLETGSRSAVMGGVTAVFEMPNT+PLTVTE +FTDK+KR RHRMHC Sbjct: 61 TQVHFREPGLDQKEDLETGSRSAVMGGVTAVFEMPNTSPLTVTEASFTDKVKRARHRMHC 120 Query: 121 DFAFFIGGTRENVQDLPELERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF 180 DFAFFIGGTRENVQDLP LERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF Sbjct: 121 DFAFFIGGTRENVQDLPVLERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF 180 Query: 181 HAEDEYRLNERKPRRIEGDSRSHPVWRDETAALMATERLVNLARETGKRIHVLHISTKEE 240 HAEDEYRLNERKP RIEGD RSHPVWRDETAALMAT+RLV LA ETGKRIHVLHISTKEE Sbjct: 181 HAEDEYRLNERKPLRIEGDPRSHPVWRDETAALMATQRLVKLAHETGKRIHVLHISTKEE 240 Query: 241 ILYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRSADHRAGIWYGIEQGIID 300 I +LRDHKDVASCEATPHHLT+ APECYERLGTLAQMNPPVR ADHRAGIW GIEQGIID Sbjct: 241 IEFLRDHKDVASCEATPHHLTLVAPECYERLGTLAQMNPPVRGADHRAGIWRGIEQGIID 300 Query: 301 VLGSDHAPHTLEEKAKSYPASPSGMTGVQTLVPLMLDHVNAGRLSLQRFVDLTSAGPARL 360 VLGSDHAPHTLEEK K+YPASPSGMTGVQTLVPLMLDHVNAGRLSL RFVDLTSAGPARL Sbjct: 301 VLGSDHAPHTLEEKQKTYPASPSGMTGVQTLVPLMLDHVNAGRLSLARFVDLTSAGPARL 360 Query: 361 FNIACKGRIAAGYDADI 377 +N+ACKGRIAAGYDAD Sbjct: 361 YNMACKGRIAAGYDADF 377 >ref|YP_579147.1| dihydroorotase [Nitrobacter hamburgensis X14] gb|ABE64687.1| dihydroorotase, multifunctional complex type [Nitrobacter hamburgensis X14] Length = 464 Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/377 (87%), Positives = 352/377 (93%) Query: 1 MNQHFDTILKSGTVVNQDGEGVRDIGIAGGRIAAIGSLGQASAGEVIDCKGLHILPGVMD 60 M + FD IL++GT+VNQDGEGV DI ++GGRIAAIG LG A AGEVIDC+GLHILPGV+D Sbjct: 21 MTKTFDVILRAGTIVNQDGEGVGDIAVSGGRIAAIGGLGHADAGEVIDCRGLHILPGVID 80 Query: 61 TQVHFREPGLTQKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEEAFTDKIKRGRHRMHC 120 TQVHFREPGLT KEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEE FT K++ G HRMHC Sbjct: 81 TQVHFREPGLTHKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEETFTAKVRAGHHRMHC 140 Query: 121 DFAFFIGGTRENVQDLPELERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF 180 DFAFFIGGTR+NVQDLPELERAPGCAGVKVF+GSSTGALLVEDD+SLR+IF+VIRRRA+F Sbjct: 141 DFAFFIGGTRDNVQDLPELERAPGCAGVKVFVGSSTGALLVEDDDSLRKIFRVIRRRASF 200 Query: 181 HAEDEYRLNERKPRRIEGDSRSHPVWRDETAALMATERLVNLARETGKRIHVLHISTKEE 240 HAEDEYRLN+RK RIEGD RSHPVWRDETAAL+AT+RLVNLARETGKRIHVLHIST+EE Sbjct: 201 HAEDEYRLNDRKGLRIEGDPRSHPVWRDETAALLATQRLVNLARETGKRIHVLHISTREE 260 Query: 241 ILYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRSADHRAGIWYGIEQGIID 300 I YLRDHKDVASCEATPHHLTM AP CYERLGTLAQMNPPVR+A HRAGIW GI+QGIID Sbjct: 261 IEYLRDHKDVASCEATPHHLTMVAPGCYERLGTLAQMNPPVRNAAHRAGIWNGIKQGIID 320 Query: 301 VLGSDHAPHTLEEKAKSYPASPSGMTGVQTLVPLMLDHVNAGRLSLQRFVDLTSAGPARL 360 VLGSDHAPHTLEEK K+YPASPSGMTGVQTLVPLMLDHVNA RLSL RFVDLTSAGPARL Sbjct: 321 VLGSDHAPHTLEEKRKTYPASPSGMTGVQTLVPLMLDHVNADRLSLARFVDLTSAGPARL 380 Query: 361 FNIACKGRIAAGYDADI 377 FNIACKGRIAAGYDAD Sbjct: 381 FNIACKGRIAAGYDADF 397 >ref|ZP_08628707.1| dihydroorotase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08608.1| dihydroorotase [Bradyrhizobiaceae bacterium SG-6C] Length = 444 Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/377 (88%), Positives = 347/377 (92%) Query: 1 MNQHFDTILKSGTVVNQDGEGVRDIGIAGGRIAAIGSLGQASAGEVIDCKGLHILPGVMD 60 M Q FD ILKSGTVVNQDGEGVRDIG+ GGRIA IGSLG A AGEVIDCKGLHILPGVMD Sbjct: 1 MAQTFDVILKSGTVVNQDGEGVRDIGVIGGRIAEIGSLGGAGAGEVIDCKGLHILPGVMD 60 Query: 61 TQVHFREPGLTQKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEEAFTDKIKRGRHRMHC 120 TQVHFREPGLT KEDLETGSRSAV+GGVTAVFEMPNTNPLTVTEE FT K+K G HRMHC Sbjct: 61 TQVHFREPGLTHKEDLETGSRSAVLGGVTAVFEMPNTNPLTVTEETFTAKVKAGHHRMHC 120 Query: 121 DFAFFIGGTRENVQDLPELERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF 180 DFAFFIGGTRENV LP+LERAPGCAGVKVFIGSSTG+LLVEDD+SLRRIF+VIRRRAAF Sbjct: 121 DFAFFIGGTRENVNHLPDLERAPGCAGVKVFIGSSTGSLLVEDDDSLRRIFKVIRRRAAF 180 Query: 181 HAEDEYRLNERKPRRIEGDSRSHPVWRDETAALMATERLVNLARETGKRIHVLHISTKEE 240 HAEDEYRLN+RK RIEGD RSHPVWRDE AAL+AT+RLVNLARETGKRIHVLHISTK+E Sbjct: 181 HAEDEYRLNDRKHLRIEGDPRSHPVWRDEDAALIATQRLVNLARETGKRIHVLHISTKQE 240 Query: 241 ILYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRSADHRAGIWYGIEQGIID 300 I YLRDHKDVASCEATPHHLT+A PE YERLGT AQMNPPVR A HR GIW GIEQGIID Sbjct: 241 IEYLRDHKDVASCEATPHHLTLAGPEAYERLGTRAQMNPPVRDASHRDGIWRGIEQGIID 300 Query: 301 VLGSDHAPHTLEEKAKSYPASPSGMTGVQTLVPLMLDHVNAGRLSLQRFVDLTSAGPARL 360 VLGSDHAPHTLEEK K YPASPSGMTGVQTLVP+MLDHVNAGRLSL RFVDLTSAGPARL Sbjct: 301 VLGSDHAPHTLEEKDKVYPASPSGMTGVQTLVPIMLDHVNAGRLSLLRFVDLTSAGPARL 360 Query: 361 FNIACKGRIAAGYDADI 377 FNIACKGRIAAGYDAD Sbjct: 361 FNIACKGRIAAGYDADF 377 >ref|YP_319308.1| dihydroorotase [Nitrobacter winogradskyi Nb-255] gb|ABA05956.1| dihydroorotase multifunctional complex type [Nitrobacter winogradskyi Nb-255] Length = 442 Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/377 (86%), Positives = 348/377 (92%) Query: 1 MNQHFDTILKSGTVVNQDGEGVRDIGIAGGRIAAIGSLGQASAGEVIDCKGLHILPGVMD 60 M + FD IL+SG +VNQDGEGV DIG++GGRIAAIG LGQA A EVIDC+GLHILPGV+D Sbjct: 1 MTKTFDVILRSGAIVNQDGEGVADIGVSGGRIAAIGGLGQADANEVIDCRGLHILPGVID 60 Query: 61 TQVHFREPGLTQKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEEAFTDKIKRGRHRMHC 120 TQVHFREPGLT KEDLETGSRSAVMGGVTAVFEMPNTNPLTVT E F K+K HRMHC Sbjct: 61 TQVHFREPGLTHKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTAETFAAKMKAAHHRMHC 120 Query: 121 DFAFFIGGTRENVQDLPELERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF 180 DFAFFIGGTRENV++LPELERAPGCAGVKVF+GSSTGALLVEDD+SLRRIF VIRRRAAF Sbjct: 121 DFAFFIGGTRENVRELPELERAPGCAGVKVFVGSSTGALLVEDDDSLRRIFNVIRRRAAF 180 Query: 181 HAEDEYRLNERKPRRIEGDSRSHPVWRDETAALMATERLVNLARETGKRIHVLHISTKEE 240 HAEDEYRLNERK R+E D RSHP+WRDETAAL+AT+RLV LARETGKRIHVLHIST+EE Sbjct: 181 HAEDEYRLNERKSLRVENDPRSHPLWRDETAALLATQRLVTLARETGKRIHVLHISTREE 240 Query: 241 ILYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRSADHRAGIWYGIEQGIID 300 I YLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVR A HR+GIW GIEQGIID Sbjct: 241 IEYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRDAAHRSGIWKGIEQGIID 300 Query: 301 VLGSDHAPHTLEEKAKSYPASPSGMTGVQTLVPLMLDHVNAGRLSLQRFVDLTSAGPARL 360 VLGSDHAPHTLEEK K+YPASPSGMTGVQTLVPLMLDHV++GRLSL RFVDLTSAGPARL Sbjct: 301 VLGSDHAPHTLEEKRKTYPASPSGMTGVQTLVPLMLDHVSSGRLSLARFVDLTSAGPARL 360 Query: 361 FNIACKGRIAAGYDADI 377 FNIACKGR+AAG+DAD Sbjct: 361 FNIACKGRVAAGFDADF 377 >ref|ZP_01045350.1| dihydroorotase [Nitrobacter sp. Nb-311A] gb|EAQ36678.1| dihydroorotase [Nitrobacter sp. Nb-311A] Length = 446 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/377 (86%), Positives = 347/377 (92%) Query: 1 MNQHFDTILKSGTVVNQDGEGVRDIGIAGGRIAAIGSLGQASAGEVIDCKGLHILPGVMD 60 M + FD IL+SG +VNQDGEGV DIG++GGRIA IG LGQA AGEVIDC+GLHILPGV+D Sbjct: 1 MTKTFDVILRSGAIVNQDGEGVGDIGVSGGRIAEIGGLGQADAGEVIDCRGLHILPGVID 60 Query: 61 TQVHFREPGLTQKEDLETGSRSAVMGGVTAVFEMPNTNPLTVTEEAFTDKIKRGRHRMHC 120 TQVHFREPGLT KEDLETGSRSA MGGVTAVFEMPNTNPLTVT E F K+K HRMHC Sbjct: 61 TQVHFREPGLTHKEDLETGSRSAAMGGVTAVFEMPNTNPLTVTAETFAAKMKAAHHRMHC 120 Query: 121 DFAFFIGGTRENVQDLPELERAPGCAGVKVFIGSSTGALLVEDDESLRRIFQVIRRRAAF 180 DFAFFIGGTRENVQDLPELERAPGCAGVKVF+GSSTGALLVEDD+SLR+IF VIRRRAAF Sbjct: 121 DFAFFIGGTRENVQDLPELERAPGCAGVKVFVGSSTGALLVEDDDSLRKIFNVIRRRAAF 180 Query: 181 HAEDEYRLNERKPRRIEGDSRSHPVWRDETAALMATERLVNLARETGKRIHVLHISTKEE 240 HAEDEYRLNERK RIEGD RSHPVWRDETAAL+AT+RLV LAR+TGKRIHVLHIST++E Sbjct: 181 HAEDEYRLNERKGLRIEGDPRSHPVWRDETAALLATQRLVTLARQTGKRIHVLHISTRQE 240 Query: 241 ILYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRSADHRAGIWYGIEQGIID 300 I YLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVR A HR+GIW GIEQGIID Sbjct: 241 IEYLRDHKDVASCEATPHHLTMAAPECYERLGTLAQMNPPVRDAAHRSGIWKGIEQGIID 300 Query: 301 VLGSDHAPHTLEEKAKSYPASPSGMTGVQTLVPLMLDHVNAGRLSLQRFVDLTSAGPARL 360 VLGSDHAPHTLEEK K+YPASPSGMTGVQTLVPLMLDHV++ RLSL RFVDLTSAGPARL Sbjct: 301 VLGSDHAPHTLEEKQKTYPASPSGMTGVQTLVPLMLDHVSSDRLSLARFVDLTSAGPARL 360 Query: 361 FNIACKGRIAAGYDADI 377 FNIACKGRIAAG+DAD Sbjct: 361 FNIACKGRIAAGFDADF 377