BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0120.0116.p         (155 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001208819.1| hypothetical protein BRADO7018 [Bradyrhizobi...   122   2e-26
ref|YP_001237220.1| hypothetical protein BBta_1062 [Bradyrhizobi...   120   8e-26
ref|NP_772521.1| hypothetical protein blr5881 [Bradyrhizobium ja...    95   4e-18
ref|XP_002889257.1| ABC1 family protein [Arabidopsis lyrata subs...    37   1.1  
gb|AAK63973.1| At1g79600/F20B17_3 [Arabidopsis thaliana]               37   1.3  

>ref|YP_001208819.1| hypothetical protein BRADO7018 [Bradyrhizobium sp. ORS 278]
 emb|CAL80604.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 392

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 8/161 (4%)

Query: 1   MIRLEPMNIRLPDSRIAVSVLTTKPRTVVVPHGPLSFVAYQRELMTSAPDNAQLRILAQV 60
           +  LE +  R PD R+A+S   TKP T V+P G + F+ ++RE   +A D  ++RI+A+V
Sbjct: 231 LFELEILQGRAPDPRVAISAAITKPSTTVLPDGHVKFIVFRRESGAAASDPIEVRIIARV 290

Query: 61  --------ARTPSSPAVAMANDAWAIRSVSVDLTVAPVPESREMVELQPVNPDLVLSPGR 112
                   +  P   A +     W +R+VS+    AP+ E  +M+E+QP  PD  L PGR
Sbjct: 291 NQVTTFDASGKPLLAAASSEEKTWVMRNVSIPFRAAPLKEDPQMIEVQPREPDAPLPPGR 350

Query: 113 YVLVFKNQAYDFVVAGKVTDKAHCLERAETPDGDRFTECRN 153
           Y LV K QA+DF V G VTD+  C++R    +G  ++EC  
Sbjct: 351 YALVLKTQAFDFTVEGTVTDRRQCMQRLSAANGTFYSECEK 391


>ref|YP_001237220.1| hypothetical protein BBta_1062 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33314.1| hypothetical protein BBta_1062 [Bradyrhizobium sp. BTAi1]
          Length = 399

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 5/157 (3%)

Query: 4   LEPMNIRLPDSRIAVSVLTTKPRTVVVPHGPLSFVAYQRELMTSAPDNAQLRILAQVART 63
           LE +  R+PD RI++S    +P    +P G + F+ ++R+L  +AP+  ++R++A+V R 
Sbjct: 243 LELLPERVPDKRISISTPINQPSRTTLPDGKVRFLLFRRDLAGNAPERLEVRVVARVTRA 302

Query: 64  PSSPA-----VAMANDAWAIRSVSVDLTVAPVPESREMVELQPVNPDLVLSPGRYVLVFK 118
            S  A     V    DAW IR+ S +L + PV    EM+  Q    D  L PGRYVL F+
Sbjct: 303 LSFDAKGKLVVTPVTDAWNIRNKSYELRLRPVAGHPEMLLAQSEKVDFALPPGRYVLAFR 362

Query: 119 NQAYDFVVAGKVTDKAHCLERAETPDGDRFTECRNLP 155
            QAYDF VAG VT+ A CLER +  +G  ++EC N P
Sbjct: 363 EQAYDFTVAGAVTELAQCLERTDAVNGSFYSECNNKP 399


>ref|NP_772521.1| hypothetical protein blr5881 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51146.1| blr5881 [Bradyrhizobium japonicum USDA 110]
          Length = 381

 Score = 94.7 bits (234), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 4/157 (2%)

Query: 1   MIRLEPMNIRLPDSRIAVSVLTTKPRTVVVPHGPLSFVAYQRELMTSAPDNAQLRILAQV 60
           +  L    +  PD R+A+S    KP    +P+G + F+ ++R+   + P+  ++R++A++
Sbjct: 221 LAELNATGVMAPDMRVAISPEFKKPDRPHLPNGRVKFIVFRRDAAHAIPERVEVRVVAKI 280

Query: 61  ARTPSSPAVAM----ANDAWAIRSVSVDLTVAPVPESREMVELQPVNPDLVLSPGRYVLV 116
           AR  S+ A        +D   IR+ +    V+P+P + EM EL   + +L L+PG YVL 
Sbjct: 281 AREFSTDAAGKTLNGGDDVGVIRNFAYPFRVSPIPGTPEMHELHTGDSELELAPGHYVLS 340

Query: 117 FKNQAYDFVVAGKVTDKAHCLERAETPDGDRFTECRN 153
              QAY F V G++TD   CLER    +G  +  C+ 
Sbjct: 341 LGTQAYYFQVDGEITDPRQCLERVVAGNGTFYAPCKK 377


>ref|XP_002889257.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
 gb|EFH65516.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 707

 Score = 36.6 bits (83), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 28  VVVPHGPLSFVAYQRELMTSAPDNAQLRILAQVARTPSSPAVAMANDAWAIRSVSVDLTV 87
           +  P G L+F+ +   +M+  P+ A+  I+  V    +    AMA D +A++ +S D+ V
Sbjct: 382 LATPDGKLAFLDFG--MMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDV 439

Query: 88  AP-VPESREMVE 98
            P VP  R+  +
Sbjct: 440 TPIVPALRDFFD 451


>gb|AAK63973.1| At1g79600/F20B17_3 [Arabidopsis thaliana]
          Length = 569

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 28  VVVPHGPLSFVAYQRELMTSAPDNAQLRILAQVARTPSSPAVAMANDAWAIRSVSVDLTV 87
           +  P G L+F+ +   +M+  P+ A+  I+  V    +    AMA D +A++ +S D+ V
Sbjct: 244 LATPDGKLAFLDFG--MMSETPEEARFAIIGHVVHLVNRDYEAMARDYYALKFLSPDVDV 301

Query: 88  AP-VPESREMVE 98
            P +P  R+  +
Sbjct: 302 TPIIPALRDFFD 313