BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0114.p (845 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003755478.1| polysaccharide biosynthesis protein [Hyphomi... 543 e-152 ref|YP_001206770.1| putative polysaccharide transport protein [B... 414 e-113 ref|YP_001206776.1| hypothetical protein BRADO4833 [Bradyrhizobi... 293 8e-77 ref|YP_004139455.1| polysaccharide biosynthesis protein [Mesorhi... 260 6e-67 ref|NP_105963.1| succinoglycan transport protein [Mesorhizobium ... 260 9e-67 >ref|YP_003755478.1| polysaccharide biosynthesis protein [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ23157.1| polysaccharide biosynthesis protein [Hyphomicrobium denitrificans ATCC 51888] Length = 531 Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust. Identities = 257/513 (50%), Positives = 367/513 (71%), Gaps = 1/513 (0%) Query: 333 RIERERPVHRNERTDQYFADNKPYSGLGRRSLHSGVAFIAARGLNIFVQLASTIVLARLL 392 ++++ + + R D+YF +N P +GLGR SLHSG+ +AARG+ + Q+ S I+LARLL Sbjct: 20 QVQQVAKIILSNRADKYFQENVPNAGLGRASLHSGIIVVAARGVGLMSQVVSIIILARLL 79 Query: 393 GPHDFGLVAMMLALIGFAPLFVDLGMSEASAQRSSISRAEVSTLFWLNVLIGVVLAVVLA 452 PHDFGL A++ +L F P+ +DLG SE+S+Q++SISRAEVSTLFW+N+++GV+LA +L Sbjct: 80 TPHDFGLAAIIFSLTSFGPMLIDLGTSESSSQKTSISRAEVSTLFWINLMMGVLLACILI 139 Query: 453 ASGRWIARAFGEPSLAGMALALSVTFLMMALSTQHYALMRRAMQFRRIAMIDISANIIGS 512 A +A + EP L +A+ S+TF+ L+ QH AL+RRAMQFR +A IDI AN+I S Sbjct: 140 ALSGPLATFYREPELTSIAIFTSITFIASGLTIQHSALLRRAMQFRSLAAIDICANVISS 199 Query: 513 AASVGLALSGWGYWALIAKPIITSALTVVGAWTACRWIPGRPRLTPMVKELLRFGLGVTG 572 S+ +AL+GWGYWAL+ K + +T +G W +CRW+P RP +P VK+ LRFG+GVTG Sbjct: 200 VLSIAMALTGWGYWALLTKTVCAICVTAIGVWFSCRWLPMRPHYSPEVKKSLRFGMGVTG 259 Query: 573 FTMTDYFARSADRIAMGYFLGAGPLGYFQNAFTIYNNLLSILSEPLHNIAVSGLSKLQHS 632 F +TD A+SADRIA+GYF GA LGY+QNA Y N+L +L++PLH IAVS LSKL++S Sbjct: 260 FLVTDNLAKSADRIALGYFYGASALGYYQNALLFYGNVLGLLADPLHPIAVSSLSKLRNS 319 Query: 633 AAELKRSWEGALSLLCYFSGPAFAALAVSAHDIVIVLLGEKWSPAGPLLCILAIRGIADC 692 E ++SW ALS L + + FA LAV+ D +++LLGE+W+PAG +LCI A+RGIA Sbjct: 320 LNEFRQSWTTALSTLSFVTALIFALLAVAGTDFIVILLGERWAPAGTILCIFAVRGIAQT 379 Query: 693 IERTLGWVHVAVGRPDRWMRWGIFSAICQLVALAAGLPFGVVGVTIAYTVTMFVLFVPAL 752 ERTLGW+HV+ GR +RWM+WG+FS++CQ+ A+ AGLPFGV+G I T+ +++LF+P L Sbjct: 380 FERTLGWLHVSSGRSERWMKWGLFSSVCQIAAVLAGLPFGVIGTAITGTIIVYLLFIPGL 439 Query: 753 VYAGRPVGISVGDVLRATAPQTIAALVAVAVAFSIQEAFLQELPRLLRIPVASVICVTAY 812 YAGRPVGI+ DV++A APQ +A L A+A+ + + ++R+ + +C Y Sbjct: 440 AYAGRPVGITTTDVVKAVAPQIVAGLAAIALGLLARHFVFHDFNEIVRLVLTGSLCAAVY 499 Query: 813 LTVVVGVFRITRPLQLAWSLLRDFGIVRLQVNS 845 + V +FR+T+PL LA S++ D+ +RL NS Sbjct: 500 FLIAVVLFRVTKPLTLALSVISDY-TMRLSRNS 531 >ref|YP_001206770.1| putative polysaccharide transport protein [Bradyrhizobium sp. ORS 278] emb|CAL78553.1| putative polysaccharide transport protein [Bradyrhizobium sp. ORS 278] Length = 499 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 215/493 (43%), Positives = 324/493 (65%) Query: 343 NERTDQYFADNKPYSGLGRRSLHSGVAFIAARGLNIFVQLASTIVLARLLGPHDFGLVAM 402 ++ YF +++ LGRR+L G+ I + N +Q+ + IVLARLL P DFGLVA+ Sbjct: 2 SQTVAAYFEEHRESKDLGRRALRGGIISIVIQYGNAALQIVAAIVLARLLAPEDFGLVAI 61 Query: 403 MLALIGFAPLFVDLGMSEASAQRSSISRAEVSTLFWLNVLIGVVLAVVLAASGRWIARAF 462 + L FAPL +D G+ +A+AQRS ++ A+VS LFW++ +GV +A+++AAS IA + Sbjct: 62 VTVLTSFAPLLIDFGLLDATAQRSRVTPAQVSALFWVSTALGVAVAMIVAASSPLIAWIY 121 Query: 463 GEPSLAGMALALSVTFLMMALSTQHYALMRRAMQFRRIAMIDISANIIGSAASVGLALSG 522 G+ L +AL++++TF++ L+ QH AL+RR MQF RI I + + G+ A++ A++G Sbjct: 122 GDHRLQPIALSVAITFVLSGLTNQHMALLRRTMQFGRIGQIQLFGTLAGTIAAIAAAVAG 181 Query: 523 WGYWALIAKPIITSALTVVGAWTACRWIPGRPRLTPMVKELLRFGLGVTGFTMTDYFARS 582 +GYWAL+ +P+I+S VV AW+AC W PG P VK ++RFGL V GFT+ +R+ Sbjct: 182 YGYWALVLRPVISSICLVVAAWSACAWRPGAPVFDDEVKSMVRFGLHVVGFTVAYTLSRA 241 Query: 583 ADRIAMGYFLGAGPLGYFQNAFTIYNNLLSILSEPLHNIAVSGLSKLQHSAAELKRSWEG 642 DRIA+G F +GY+QNA +Y+N +S H + S LSKLQ + + L+ + Sbjct: 242 VDRIALGLFYRPDQVGYYQNAMNLYDNSMSTALSQTHAVGSSALSKLQSNPSALREKYAA 301 Query: 643 ALSLLCYFSGPAFAALAVSAHDIVIVLLGEKWSPAGPLLCILAIRGIADCIERTLGWVHV 702 ALS+L +F PA A L+V+A D+ +VLLG+KW AG LL I+A+RGI+ +E + GW+H+ Sbjct: 302 ALSILAFFLMPAAAILSVTAEDLTVVLLGQKWQAAGALLSIMALRGISHVVEGSQGWLHL 361 Query: 703 AVGRPDRWMRWGIFSAICQLVALAAGLPFGVVGVTIAYTVTMFVLFVPALVYAGRPVGIS 762 ++GR DRW WGI S + Q+ A+ AGLPFG VGV A + +L +P++++AGRP+ I Sbjct: 362 SLGRADRWQTWGIVSLVAQVAAVCAGLPFGPVGVAWAVVIGYSLLALPSVIFAGRPIDIG 421 Query: 763 VGDVLRATAPQTIAALVAVAVAFSIQEAFLQELPRLLRIPVASVICVTAYLTVVVGVFRI 822 VG V RA PQTI A+V A + +Q A L+ P ++R+ ++ C YL VVVGVFR Sbjct: 422 VGLVARAAGPQTIGAIVTAAAGWWLQAALLESYPPIVRMILSGCFCGCVYLAVVVGVFRH 481 Query: 823 TRPLQLAWSLLRD 835 PL++A ++++D Sbjct: 482 VEPLRVAGTIIQD 494 >ref|YP_001206776.1| hypothetical protein BRADO4833 [Bradyrhizobium sp. ORS 278] emb|CAL78559.1| hypothetical protein BRADO4833 [Bradyrhizobium sp. ORS 278] Length = 366 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 155/331 (46%), Positives = 205/331 (61%), Gaps = 10/331 (3%) Query: 1 VEVRSKEEILATLDANGRLEEMPFMPEMLKHCGKTLRVGKRAHKTCDPALGIG-----GR 55 V+VRSKEEILATLDANGRLE +PFMP+M K CG+ +V KRAHKTCD G GR Sbjct: 9 VQVRSKEEILATLDANGRLEGLPFMPQMFKWCGQRFQVYKRAHKTCDTVTGYNTGEWLGR 68 Query: 56 KMLNTVHLENIRCNGAAHDGCEAACLIFWKDAWLKPAGE-KGPSPNGSGKPSR--SGGCS 112 ++ N VHL ++RC+G A+ GC+AACLIFWK+AWL PA + S + +R SGGC+ Sbjct: 69 RLPNAVHL-DLRCDGEAYGGCQAACLIFWKEAWLLPADPAQAASADHDYAAARQPSGGCT 127 Query: 113 EETLWSTIKHPPKVGETEPTYVCQNTQVKFATQPLKWWDPRQYVEDYTSGNVRLQDLVAG 172 + + P ++ P Y CQ T++ TQPLKWWD RQY ED SGNV + G Sbjct: 128 ARAVLDATESPDQIAGKGPRYSCQATELPSYTQPLKWWDARQYAEDIASGNVSAGKMFRG 187 Query: 173 LTFSVWRTVTEAGLG-IGTAMRWIYDTFQRMRGGVPYPIRPFGVPEGSKVPQSRLDLQVG 231 + + T A +G RWIYD Q + GGVP+P R + P + L LQ G Sbjct: 188 FLYFAYVGATMARRPRLGRPARWIYDRIQSLWGGVPFPRRRGDLLTDKDAPIADLGLQPG 247 Query: 232 DVVRVKPYKDILETLDCNYRNRGLYFDPEMVPFTEREYEVERRQKQIIDEGSCKMVRFKT 291 D+VRV+P+K+IL T+D NRG+ FD EMVP+ + + V R ++ IDE + + R KT Sbjct: 248 DLVRVRPHKEILATIDKQTNNRGMGFDAEMVPYCGKVFRVRTRVEKFIDERTGYIRRMKT 307 Query: 292 DAIILKDVVCEARYAICRRFCPRAIYPYWRE 322 A+IL V C++RY+ R FCPR I+ +WRE Sbjct: 308 PAVILDGVYCQSRYSENRLFCPRGIFAWWRE 338 Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 226 LDLQVGDVVRVKPYKDILETLDCNYRNRGLYFDPEMVPFTEREYEVERRQKQIID 280 + L GD V+V+ ++IL TLD N R GL F P+M + + ++V +R + D Sbjct: 1 MTLSAGDWVQVRSKEEILATLDANGRLEGLPFMPQMFKWCGQRFQVYKRAHKTCD 55 >ref|YP_004139455.1| polysaccharide biosynthesis protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09405.1| polysaccharide biosynthesis protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 498 Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 159/467 (34%), Positives = 254/467 (54%), Gaps = 10/467 (2%) Query: 354 KPYSGLGRRSLHSGVAFIA-ARGLNIFVQLASTIVLARLLGPHDFGLVAMMLALIGFAPL 412 P G R+S+ G A A+ + + Q+ S IVL+RLL P DFG+VAM ++ F L Sbjct: 7 DPPEGSLRKSVGRGAVVTAMAQSVRVATQILSVIVLSRLLSPQDFGVVAMCAPVLAFIAL 66 Query: 413 FVDLGMSEASAQRSSISRAEVSTLFWLNVLIGVVLAVVLAASGRWIARAFGEPSLAGMAL 472 F D G+++A+ Q+S I EV+ LFW+NV + +LA VLA + +A +GEP + G+ Sbjct: 67 FQDFGLTQATIQKSGIRHEEVNYLFWINVAVSAILACVLAGAAPLVAAFYGEPRVTGLVA 126 Query: 473 ALSVTFLMMALSTQHYALMRRAMQFRRIAMIDISANIIGSAASVGLALSGWGYWALIAKP 532 A + + L QH AL+ R MQF R+A+ID+++ I G A S+ YWAL A Sbjct: 127 AFGLQIMAYGLGAQHLALLTRRMQFGRLAVIDVASAIAGLAVSIAWTFIDRSYWALFAGT 186 Query: 533 IITSALTVVGAWTACRWIPGRPRLTPMVKELLRFGLGVTGFTMTDYFARSADRIAMGYFL 592 + + L + W + RW PG PR + EL+ FG G+TGF ++FAR+ D + +G + Sbjct: 187 LTGAVLPTLCYWASSRWRPGLPRKVAGIGELINFGAGITGFNFANFFARNLDNVLIGKYW 246 Query: 593 GAGPLGYFQNAFTIYNNLLSILSEPLHNIAVSGLSKLQHSAAELKRSWEGALSLLCYFSG 652 G LG + A+ + LS ++ PL + V LS+L+ + ++ + L+ + Sbjct: 247 GEAQLGLYDRAYKLLLFPLSQITNPLSKVMVPALSRLKDEPDRYRSAYLRVMPLILLVAL 306 Query: 653 PAFAALAVSAHDIVI-VLLGEKWSPAGPLLCILAIRGIADCIERTLGWVHVAVGRPDRWM 711 P A A + D++I +LGE+W + + L G+ + GW+ V+ GR +M Sbjct: 307 PG-VAFATAMSDVLIPFVLGEQWRASASIFLALGFAGLLQPLNNPAGWLFVSQGRSGDFM 365 Query: 712 RWGIFSAICQLVALAAGLPFGVVGVTIAYTVTMFVLFVPAL-VYAGRPVGISVGDVLRAT 770 RWGI +A+ ++A GLP+G +GV IAY ++ + L P L +Y G+ + VLRA Sbjct: 366 RWGIITAVTSVLAFMLGLPYGALGVAIAYAISEY-LRTPFLWLYVGKSGPLQAHHVLRAA 424 Query: 771 APQTIAALVAVAVAFSIQEAFLQELPRLLRIPVASVICVTAYLTVVV 817 P + A +A+A + ++ A LP+ + +AS V AYL ++ Sbjct: 425 TPFVLGAHLALAAIWFVKPA----LPQQHVVALASS-AVFAYLITII 466 >ref|NP_105963.1| succinoglycan transport protein [Mesorhizobium loti MAFF303099] dbj|BAB51749.1| probable succinoglycan transport protein [Mesorhizobium loti MAFF303099] Length = 561 Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 157/469 (33%), Positives = 254/469 (54%), Gaps = 9/469 (1%) Query: 354 KPYSGLGRRSLHSGVAFIA-ARGLNIFVQLASTIVLARLLGPHDFGLVAMMLALIGFAPL 412 P G R+S+ G A ++ + + Q+ S IVL+RLL P DFG+VAM ++ F L Sbjct: 70 DPPEGSLRKSVGRGAVVTAMSQSVRVATQIISVIVLSRLLSPQDFGVVAMCAPVLAFIAL 129 Query: 413 FVDLGMSEASAQRSSISRAEVSTLFWLNVLIGVVLAVVLAASGRWIARAFGEPSLAGMAL 472 F D G+++A+ Q+S I EV+ LFW+NV + +LA VLA + +A +GEP +AG+ Sbjct: 130 FQDFGLTQATIQKSGIRHEEVNYLFWINVAVSAILACVLAGAAPLVAAFYGEPRVAGLVA 189 Query: 473 ALSVTFLMMALSTQHYALMRRAMQFRRIAMIDISANIIGSAASVGLALSGWGYWALIAKP 532 A + + L QH AL+ R MQF R+A++D+++ + G A S+ YWAL A Sbjct: 190 AFGLQIMAYGLGAQHLALLTRRMQFGRLAIVDVASAVAGLAVSIAWTFIDRSYWALFAGT 249 Query: 533 IITSALTVVGAWTACRWIPGRPRLTPMVKELLRFGLGVTGFTMTDYFARSADRIAMGYFL 592 + + L + W + RW P PR + EL+ FG G+TGF ++FAR+ D + +G + Sbjct: 250 LTGAVLPTLCYWASSRWRPSLPRKVAGIGELINFGAGITGFNFANFFARNLDNVLIGKYW 309 Query: 593 GAGPLGYFQNAFTIYNNLLSILSEPLHNIAVSGLSKLQHSAAELKRSWEGALSLLCYFSG 652 G LG + A+ + LS ++ PL + V LS+L+ + ++ + L+ + Sbjct: 310 GEQQLGLYDRAYKLLLFPLSQITNPLSKVMVPALSRLKDEPDRYRSAYLRVMPLILLVAL 369 Query: 653 PAFAALAVSAHDIVI-VLLGEKWSPAGPLLCILAIRGIADCIERTLGWVHVAVGRPDRWM 711 P A A + D++I +LGE+W + + L G+ + GW+ V+ GR +M Sbjct: 370 PG-VAFATAMSDVLIPFVLGEQWRASASIFLALGFAGLLQPLNNPAGWLFVSQGRSGDFM 428 Query: 712 RWGIFSAICQLVALAAGLPFGVVGVTIAYTVTMFVLFVPAL-VYAGRPVGISVGDVLRAT 770 RWGI +A+ ++A A GLP+G +GV IAY ++ + L P L +Y G+ + VLRA Sbjct: 429 RWGIITAVTSVLAFALGLPYGALGVAIAYAISEY-LRTPFLWLYVGKSGPLRASHVLRAA 487 Query: 771 APQTIAALVAVAVAFSIQEAFLQELPRLLRIPVASVICVTAYLTVVVGV 819 P + A +A+A + I+ LP+ I +AS + +T VV + Sbjct: 488 TPFVLGAHLALAAVWLIKP----MLPQQHVIALASGAILAYLITSVVAL 532