BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0092.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001683004.1| glycine betaine ABC transporter substrate-bi... 224 4e-57 ref|YP_002129772.1| substrate-binding region of ABC-type glycine... 216 1e-54 ref|YP_003594385.1| glycine/betaine ABC transporter substrate-bi... 216 2e-54 ref|ZP_08700366.1| ABC transporter permease protein [Citromicrob... 208 2e-52 ref|ZP_08387161.1| binding--dependent transport system inner mem... 203 7e-51 >ref|YP_001683004.1| glycine betaine ABC transporter substrate-binding protein [Caulobacter sp. K31] gb|ABZ70506.1| Substrate-binding region of ABC-type glycine betaine transport system [Caulobacter sp. K31] Length = 515 Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 113/181 (62%), Positives = 136/181 (75%) Query: 1 MKAEQGVTVLGALGFENAYVLAMKRERAQALNVTSLADLARVAPQLTIGDDLEFLGRPEW 60 ++ GV +L LGFENAY LAM+R+RA+AL + +LADLA AP LT+G DLEF RPEW Sbjct: 334 LRRRDGVVLLAPLGFENAYALAMRRDRAEALGIRTLADLAAKAPNLTLGGDLEFFSRPEW 393 Query: 61 RSLKDAYGLSFRTRRSFNPTMMYHALESGEADVISAFSSDGRIAALDLLVLADPKHAIPS 120 S++ YGL F+T+R F PT MY AL SGEADVISAFSSDGRIAA DL+VL DPK A+P Sbjct: 394 ASVEATYGLRFKTKRQFQPTFMYRALGSGEADVISAFSSDGRIAADDLVVLGDPKGALPP 453 Query: 121 YDALILVAPKRSADARLKRALVPLVGSVSVEAMRAANLMVDGDTDKASPEEAARALAKAV 180 YDA++L+AP R+ D RL+ AL L G++ VEAMRAAN VD D DK SP EAARAL K + Sbjct: 454 YDAVLLIAPGRAEDRRLRAALAGLDGAIGVEAMRAANYSVDRDQDKRSPAEAARALEKGL 513 Query: 181 H 181 Sbjct: 514 K 514 >ref|YP_002129772.1| substrate-binding region of ABC-type glycine betaine transport system [Phenylobacterium zucineum HLK1] gb|ACG77343.1| substrate-binding region of ABC-type glycine betaine transport system [Phenylobacterium zucineum HLK1] Length = 521 Score = 216 bits (550), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 112/177 (63%), Positives = 132/177 (74%) Query: 6 GVTVLGALGFENAYVLAMKRERAQALNVTSLADLARVAPQLTIGDDLEFLGRPEWRSLKD 65 GV VLG+LGFENAY M+ +RA+AL V L DLAR AP L +G DLEFL RPEWR+++ Sbjct: 345 GVRVLGSLGFENAYAFVMRPDRARALGVADLDDLAREAPGLALGSDLEFLSRPEWRAVEA 404 Query: 66 AYGLSFRTRRSFNPTMMYHALESGEADVISAFSSDGRIAALDLLVLADPKHAIPSYDALI 125 AYGL FR+ RS+ PT MY AL GEADVISAFSSDGRIAA L+VL DP+ AIP YDA+I Sbjct: 405 AYGLKFRSARSYQPTFMYRALAGGEADVISAFSSDGRIAAGGLVVLPDPRGAIPPYDAVI 464 Query: 126 LVAPKRSADARLKRALVPLVGSVSVEAMRAANLMVDGDTDKASPEEAARALAKAVHL 182 L++P R D RL AL PLVG++ VEAMRAAN VD D+ KA+P AAR L K + L Sbjct: 465 LISPARRDDPRLLAALRPLVGAIPVEAMRAANYSVDRDSGKATPAGAARTLEKDLGL 521 >ref|YP_003594385.1| glycine/betaine ABC transporter substrate-binding protein [Caulobacter segnis ATCC 21756] gb|ADG11767.1| Substrate-binding region of ABC-type glycine betaine transport system [Caulobacter segnis ATCC 21756] Length = 515 Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 111/178 (62%), Positives = 132/178 (74%) Query: 1 MKAEQGVTVLGALGFENAYVLAMKRERAQALNVTSLADLARVAPQLTIGDDLEFLGRPEW 60 ++A GV +L LGFENAY LAM+R+RA+AL + SLADLA AP LT+G DLEF RPEW Sbjct: 338 LEARDGVVLLAPLGFENAYALAMRRDRAEALGIKSLADLAARAPDLTMGGDLEFFSRPEW 397 Query: 61 RSLKDAYGLSFRTRRSFNPTMMYHALESGEADVISAFSSDGRIAALDLLVLADPKHAIPS 120 ++ AYGL F+ R F PT MY ALES EADVISAFSSDGRIAA DL++L DP+ A+P Sbjct: 398 AAVVTAYGLRFKAERQFQPTFMYRALESREADVISAFSSDGRIAADDLVLLTDPRGALPP 457 Query: 121 YDALILVAPKRSADARLKRALVPLVGSVSVEAMRAANLMVDGDTDKASPEEAARALAK 178 YDA+ILV+PKR+ D RL AL PL GS+ V AM+AAN VD D K SP EAA LA+ Sbjct: 458 YDAVILVSPKRAGDRRLIEALKPLGGSIDVRAMQAANYAVDRDAGKKSPAEAAAMLAR 515 >ref|ZP_08700366.1| ABC transporter permease protein [Citromicrobium sp. JLT1363] Length = 516 Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 102/180 (56%), Positives = 136/180 (75%), Gaps = 1/180 (0%) Query: 5 QGVTVLGALGFENAYVLAMKRERAQALNVTSLADLARVAPQLTIGDDLEFLGRPEWRSLK 64 QG VLG LGFENAY AM+ +RA+ L + S+ DLAR AP+L G D E+ RPEW +++ Sbjct: 337 QGTRVLGKLGFENAYAFAMREDRARELGIRSIEDLARAAPRLVAGGDPEWFERPEWFAVR 396 Query: 65 DAYGLSFRTRRSFNPTMMYHALESGEADVISAFSSDGRIAALDLLVLADPKHAIPSYDAL 124 DAYGL+F R+F+PT MY+AL SG+ADVISA++SDGRIAA +L++L DP+ A+PSYD L Sbjct: 397 DAYGLNFSNERNFSPTFMYNALRSGDADVISAYTSDGRIAADNLVILEDPREALPSYDTL 456 Query: 125 ILVAPKRSADARLKRALVPLVGSVSVEAMRAANLMVD-GDTDKASPEEAARALAKAVHLQ 183 I+++P+R+ D RL AL PL+GS+ V+AMR AN VD D +K +P EAAR LA+ V L+ Sbjct: 457 IILSPERANDERLIAALRPLLGSIDVKAMREANFSVDRTDGNKKTPREAARWLAEEVGLE 516 >ref|ZP_08387161.1| binding--dependent transport system inner membrane component family protein [Sphingomonas sp. S17] gb|EGI56448.1| binding--dependent transport system inner membrane component family protein [Sphingomonas sp. S17] Length = 513 Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 111/181 (61%), Positives = 131/181 (72%), Gaps = 1/181 (0%) Query: 3 AEQGVTVLGALGFENAYVLAMKRERAQALNVTSLADLARVAPQLTIGDDLEFLGRPEWRS 62 A + VT+LG LGFENAY AMK A+ L V SLADL+RVAP+LT+G DLEFL RPEW + Sbjct: 333 ATRDVTMLGPLGFENAYAFAMKTPLAERLGVRSLADLSRVAPRLTLGSDLEFLDRPEWAA 392 Query: 63 LKDAYGLSFRTRRSFNPTMMYHALESGEADVISAFSSDGRIAALDLLVLADPKHAIPSYD 122 ++DAY L F + ++PT MY AL+SG ADVISAFSSDGRIAA L VL+DPK AIP YD Sbjct: 393 VRDAYDLRFASMTPYSPTFMYRALDSGRADVISAFSSDGRIAADRLTVLSDPKRAIPGYD 452 Query: 123 ALILVAPKRSADARLKRALVPLVGSVSVEAMRAANLMVD-GDTDKASPEEAARALAKAVH 181 A++LVA R+ DAR AL P++ + VEAMR AN VD D K SPE AAR LAK V Sbjct: 453 AVLLVAKDRAGDARFVEALRPMLNRIPVEAMREANYRVDRDDAAKESPEAAARWLAKRVG 512 Query: 182 L 182 L Sbjct: 513 L 513