BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0076.p (403 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002490206.1| FAD dependent oxidoreductase [Methylobacteri... 649 0.0 ref|ZP_02886055.1| FAD dependent oxidoreductase [Burkholderia gr... 572 e-161 ref|YP_001768285.1| FAD dependent oxidoreductase [Methylobacteri... 569 e-160 ref|YP_002498504.1| FAD dependent oxidoreductase [Methylobacteri... 560 e-157 ref|YP_001022840.1| hypothetical protein Mpe_A3652 [Methylibium ... 543 e-152 >ref|YP_002490206.1| FAD dependent oxidoreductase [Methylobacterium nodulans ORS 2060] gb|ACL63039.1| FAD dependent oxidoreductase [Methylobacterium nodulans ORS 2060] Length = 441 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/403 (77%), Positives = 345/403 (85%) Query: 1 VERYGFCGGGAVAGLSGTVCGLYEATEAINAKPKQVVFGFADEFCRRLEAKGGLGDPLLY 60 VERYGFCGGGAVAGLSGTVCGLY AT+ A P+QVVFGFADEFCRRL+ GGL P+ Y Sbjct: 39 VERYGFCGGGAVAGLSGTVCGLYAATDDRQAPPEQVVFGFADEFCRRLDGLGGLSAPMPY 98 Query: 61 GKTWARVHDPLIWREEADAMLREAGVRVVFHAVASDVSMEGDRIGGVVIWTKQGPLDARA 120 GKT+ RVHDPLIWRE AD+ LREAG+ V+FHAVA EGDR+ G+ IWTK+GP+DARA Sbjct: 99 GKTYTRVHDPLIWRETADSFLREAGIEVIFHAVAVGALCEGDRVEGLEIWTKEGPIDARA 158 Query: 121 KVVVDASGDADVVAMAGLPSFIGDNGRVQNPTMIFRMMGVDIGRFVTEYGADTIMPEKIS 180 VVVDASGDADVVA+AGLPSFIGDNG VQNPTMIFR+MGVD+ RF EYG DTIMPE+IS Sbjct: 159 SVVVDASGDADVVALAGLPSFIGDNGTVQNPTMIFRLMGVDVDRFKAEYGEDTIMPERIS 218 Query: 181 DMIRAKHNAGEYRLPRAKIWLFPTTRPDELLCNCTRVIGPDGRELNTLFHQDFTDAEIEG 240 ++IR K N GEY LPRAKIWLFPTTRP ELLCNCTRV+GPDGRELNTL DFTDAE EG Sbjct: 219 ELIRRKDNLGEYHLPRAKIWLFPTTRPGELLCNCTRVLGPDGRELNTLRWLDFTDAEFEG 278 Query: 241 RLQAREYARFFRDHLVGCETAFLNDTGVQVGVRQTRQVSGVKRLSNEDVVKGTKSSDGIA 300 R Q REYARFFRD+LVGCE+AF+NDTGVQVGVRQTRQ+SG RL N DVV G KS +GIA Sbjct: 279 RRQMREYARFFRDNLVGCESAFVNDTGVQVGVRQTRQMSGRSRLMNADVVSGAKSPEGIA 338 Query: 301 VSPWPIELHSGVKPRVEWLLNDYYEVPYGCFVPERGEGLLVAGRCLSAEHEAVASARVTA 360 SPWPIELH+G KPRVEWLLNDYYEVP+GCFVPERGEGLL AGRCLSAEHEAVASARVTA Sbjct: 339 RSPWPIELHAGQKPRVEWLLNDYYEVPFGCFVPERGEGLLAAGRCLSAEHEAVASARVTA 398 Query: 361 QCFSYGHAIGHAAVIAVRDGIAPRHIDGQQVRAAVNADGARLD 403 QCF+YGHA+GHAA IAV+D ++ R I G +RA +N DGA LD Sbjct: 399 QCFAYGHAVGHAAAIAVKDKVSTRSISGADLRALLNRDGAALD 441 >ref|ZP_02886055.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M] gb|EDT08443.1| FAD dependent oxidoreductase [Burkholderia graminis C4D1M] Length = 445 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 282/402 (70%), Positives = 334/402 (83%), Gaps = 1/402 (0%) Query: 1 VERYGFCGGGAVAGLSGTVCGLYEATEAINAKPKQVVFGFADEFCRRLEAKGGLGDPLLY 60 +ERYGFCGGGAVAGLSGTVCGLY ATE + AKP+QVVFGFADEF R LE +GGL DP+ Y Sbjct: 44 LERYGFCGGGAVAGLSGTVCGLYLATERVGAKPEQVVFGFADEFVRALETRGGLADPVRY 103 Query: 61 GKTWARVHDPLIWREEADAMLREAGVRVVFHAVASDVSMEGDRIGGVVIWTKQGPLDARA 120 G+TW RVHDPLIWR+ ADA+L AGV+V++H++A+ M+G R+ GV WTKQGPLD RA Sbjct: 104 GRTWTRVHDPLIWRDTADALLAGAGVQVIYHSIATGALMDGARVEGVRAWTKQGPLDIRA 163 Query: 121 KVVVDASGDADVVAMAGLPSFIGDNGRVQNPTMIFRMMGVDIGRFVTEYGADTIMPEKIS 180 K+ +DASGDADVVAMAGL SFIG +GRVQNPTMIFR++GVDIGRF+ YG DTIM E++S Sbjct: 164 KLTIDASGDADVVAMAGLSSFIGHDGRVQNPTMIFRLLGVDIGRFLAAYGDDTIMGEEVS 223 Query: 181 DMIRAKHNAGEYRLPRAKIWLFPTTRPDELLCNCTRVIGPDGRELNTLFHQDFTDAEIEG 240 +RA +AG LPRAKIWLF TTRP ELLCNCTRV G DGRELN+L DFT+AEIEG Sbjct: 224 LKLRAAADAGA-NLPRAKIWLFTTTRPGELLCNCTRVTGADGRELNSLLRDDFTEAEIEG 282 Query: 241 RLQAREYARFFRDHLVGCETAFLNDTGVQVGVRQTRQVSGVKRLSNEDVVKGTKSSDGIA 300 R Q YA+FFR +L GCE AF+NDTG+QVG+RQ+RQVSGV RL N+DV+ K DGIA Sbjct: 283 RKQVHAYAQFFRKNLAGCENAFVNDTGMQVGIRQSRQVSGVTRLLNDDVLAARKFDDGIA 342 Query: 301 VSPWPIELHSGVKPRVEWLLNDYYEVPYGCFVPERGEGLLVAGRCLSAEHEAVASARVTA 360 VSPWPIELH+G KP+VEW+L+D+Y VPYGCFVP+ G+GLLVAGRCLSAEHEAVASARVTA Sbjct: 343 VSPWPIELHAGAKPKVEWILDDFYTVPYGCFVPQSGDGLLVAGRCLSAEHEAVASARVTA 402 Query: 361 QCFSYGHAIGHAAVIAVRDGIAPRHIDGQQVRAAVNADGARL 402 QCFSYGHAIGHAA IA+ + + PR ++ +R A++ DGA+L Sbjct: 403 QCFSYGHAIGHAAAIAINERLEPRQVEPSAIRRALDRDGAQL 444 >ref|YP_001768285.1| FAD dependent oxidoreductase [Methylobacterium sp. 4-46] gb|ACA15851.1| FAD dependent oxidoreductase [Methylobacterium sp. 4-46] Length = 446 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 297/404 (73%), Positives = 333/404 (82%), Gaps = 1/404 (0%) Query: 1 VERYGFCGGGAVAGLSGTVCGLYEATEAINAKPKQVVFGFADEFCRRLEAKGGLGDPLLY 60 +ERYGFCGGGAVAGLSGT+CG+Y ATE A P+QVV GF DEF LEA+GGL +P+ Y Sbjct: 43 LERYGFCGGGAVAGLSGTICGMYAATEDRAAPPRQVVHGFLDEFVAALEARGGLAEPVRY 102 Query: 61 GKTWARVHDPLIWREEADAMLREAGVRVVFHAVASDVSMEG-DRIGGVVIWTKQGPLDAR 119 GKT+ RVHDPL+WRE ADA+L EAGVR+++HAV + +EG +R+ GVV +TK+G R Sbjct: 103 GKTYTRVHDPLVWREAADALLAEAGVRIIYHAVVTGALVEGAERVEGVVAFTKEGRARIR 162 Query: 120 AKVVVDASGDADVVAMAGLPSFIGDNGRVQNPTMIFRMMGVDIGRFVTEYGADTIMPEKI 179 AKV VDASGDADVVAMAGLPSF+G +GRVQNPTMIFR+MGVD RFV+ YG DTIM E++ Sbjct: 163 AKVTVDASGDADVVAMAGLPSFVGQDGRVQNPTMIFRLMGVDTARFVSRYGTDTIMGEEV 222 Query: 180 SDMIRAKHNAGEYRLPRAKIWLFPTTRPDELLCNCTRVIGPDGRELNTLFHQDFTDAEIE 239 S +IR K Y LPRAKIWLF TTRP ELLCNCTRVIG DGRELNTLF +DFT+AEIE Sbjct: 223 SALIREKAAGNGYTLPRAKIWLFTTTRPGELLCNCTRVIGADGRELNTLFARDFTEAEIE 282 Query: 240 GRLQAREYARFFRDHLVGCETAFLNDTGVQVGVRQTRQVSGVKRLSNEDVVKGTKSSDGI 299 GR Q REYARFFRDHL GCE +F+NDTGVQVGVRQTRQ GV L N DVV GTK +DGI Sbjct: 283 GRRQVREYARFFRDHLAGCEASFVNDTGVQVGVRQTRQARGVALLRNADVVAGTKFADGI 342 Query: 300 AVSPWPIELHSGVKPRVEWLLNDYYEVPYGCFVPERGEGLLVAGRCLSAEHEAVASARVT 359 A SPWPIELHSG KPRVEWL++D YEVPYGCFVPERGEGLL AGRCLSAEHEAVASARVT Sbjct: 343 ARSPWPIELHSGAKPRVEWLIDDVYEVPYGCFVPERGEGLLFAGRCLSAEHEAVASARVT 402 Query: 360 AQCFSYGHAIGHAAVIAVRDGIAPRHIDGQQVRAAVNADGARLD 403 AQCFSYGHAIGHAA IA D +APR I G +RA +N DGARLD Sbjct: 403 AQCFSYGHAIGHAAAIAALDRVAPRAIAGADLRARLNRDGARLD 446 >ref|YP_002498504.1| FAD dependent oxidoreductase [Methylobacterium nodulans ORS 2060] gb|ACL58201.1| FAD dependent oxidoreductase [Methylobacterium nodulans ORS 2060] Length = 445 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 290/404 (71%), Positives = 331/404 (81%), Gaps = 1/404 (0%) Query: 1 VERYGFCGGGAVAGLSGTVCGLYEATEAINAKPKQVVFGFADEFCRRLEAKGGLGDPLLY 60 +ERYGFCGGGAVAGLSGT+CG+Y AT+ NA P+QVV GF D+F +E +GGL +P+ Y Sbjct: 42 LERYGFCGGGAVAGLSGTICGMYAATDDRNAPPRQVVHGFLDDFVAAMEYRGGLAEPVRY 101 Query: 61 GKTWARVHDPLIWREEADAMLREAGVRVVFHAVASDVSMEG-DRIGGVVIWTKQGPLDAR 119 GKT+ RVHDPL+WRE ADA+L EAGVRV++H V + +EG +RI GVV +TK+G R Sbjct: 102 GKTYTRVHDPLVWREAADALLAEAGVRVIYHTVVTGALVEGGERIEGVVAYTKEGRARIR 161 Query: 120 AKVVVDASGDADVVAMAGLPSFIGDNGRVQNPTMIFRMMGVDIGRFVTEYGADTIMPEKI 179 AKV +DASGDADVVAMAGLPSF+G +G VQNPTMIFR+MGVD RF+ YG DTIM E++ Sbjct: 162 AKVTIDASGDADVVAMAGLPSFVGQDGHVQNPTMIFRLMGVDTARFLKTYGTDTIMGEEV 221 Query: 180 SDMIRAKHNAGEYRLPRAKIWLFPTTRPDELLCNCTRVIGPDGRELNTLFHQDFTDAEIE 239 S +IR K Y LPRAKIWLF TTRP ELLCNCTRVIG +GRELNTL+ +DFT+AEIE Sbjct: 222 SALIREKGGGNGYTLPRAKIWLFTTTRPGELLCNCTRVIGAEGRELNTLYARDFTEAEIE 281 Query: 240 GRLQAREYARFFRDHLVGCETAFLNDTGVQVGVRQTRQVSGVKRLSNEDVVKGTKSSDGI 299 GR Q REYARFFRDHLVGCE +F+NDTGVQVGVRQTRQ GV L N DV+ GTK +DGI Sbjct: 282 GRRQMREYARFFRDHLVGCENSFVNDTGVQVGVRQTRQAKGVSLLRNADVLAGTKFADGI 341 Query: 300 AVSPWPIELHSGVKPRVEWLLNDYYEVPYGCFVPERGEGLLVAGRCLSAEHEAVASARVT 359 A SPWPIELH+G KPRVEWLL+D YEVPYGCFVPERGEGLL AGRCLSAEHEAVASARVT Sbjct: 342 ARSPWPIELHTGAKPRVEWLLDDVYEVPYGCFVPERGEGLLTAGRCLSAEHEAVASARVT 401 Query: 360 AQCFSYGHAIGHAAVIAVRDGIAPRHIDGQQVRAAVNADGARLD 403 AQCFSYGHAIGHAA IA D +APR I G +RA +N DGARLD Sbjct: 402 AQCFSYGHAIGHAAAIAALDRVAPRAILGADLRARLNRDGARLD 445 >ref|YP_001022840.1| hypothetical protein Mpe_A3652 [Methylibium petroleiphilum PM1] gb|ABM96605.1| putative membrane protein [Methylibium petroleiphilum PM1] Length = 440 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 268/403 (66%), Positives = 319/403 (79%), Gaps = 2/403 (0%) Query: 1 VERYGFCGGGAVAGLSGTVCGLYEATEAINAKPKQVVFGFADEFCRRLEAKGGLGDPLLY 60 VERYGFCGGGAVAGLSGTVCGLYEA EA +PKQ+V GF D+F +E +GGL +P+LY Sbjct: 39 VERYGFCGGGAVAGLSGTVCGLYEAEEAPR-RPKQIVHGFVDDFIAAMEQRGGLAEPVLY 97 Query: 61 GKTWARVHDPLIWREEADAMLREAGVRVVFHAVASDVSMEGDRIGGVVIWTKQGPLDARA 120 GKTW RVH+PL WRE ADA+L AGVR+ +HA+A+ V +GDRI G +WTK G LD RA Sbjct: 98 GKTWTRVHEPLAWRESADALLGSAGVRLAYHALATGVHRDGDRIDGATVWTKGGLLDVRA 157 Query: 121 KVVVDASGDADVVAMAGLPSFIGDNGRVQNPTMIFRMMGVDIGRFVTEYGADTIMPEKIS 180 + +DASGDAD+VAMAGL ++ G +G VQNPTMIFR+ GVD+ RF YG+DTIMP +++ Sbjct: 158 GLTIDASGDADLVAMAGLETYCGADGVVQNPTMIFRLQGVDVARFKEAYGSDTIMPPEVT 217 Query: 181 DMIRAKHNAGEYRLPRAKIWLFPTTRPDELLCNCTRVIGPDGRELNTLFHQDFTDAEIEG 240 +I A +A Y LPR KIWLF TTRP ELLCNCTRV G DGRELN + DFT+AE+EG Sbjct: 218 ALIAAAADA-GYALPRQKIWLFETTRPGELLCNCTRVRGADGRELNCIDGDDFTEAEVEG 276 Query: 241 RLQAREYARFFRDHLVGCETAFLNDTGVQVGVRQTRQVSGVKRLSNEDVVKGTKSSDGIA 300 R Q REYARFF+D L GCE +++NDT VQVGVRQTRQ G+ L NEDVV+G+K +DG+A Sbjct: 277 RRQVREYARFFKDRLAGCEASWVNDTAVQVGVRQTRQARGLATLRNEDVVQGSKFADGVA 336 Query: 301 VSPWPIELHSGVKPRVEWLLNDYYEVPYGCFVPERGEGLLVAGRCLSAEHEAVASARVTA 360 SPWPIELH+G KPRV+WLLND+YEVP+GCFVPERGEGLL GRCLSAEHEAVASARVTA Sbjct: 337 RSPWPIELHAGSKPRVQWLLNDWYEVPWGCFVPERGEGLLFGGRCLSAEHEAVASARVTA 396 Query: 361 QCFSYGHAIGHAAVIAVRDGIAPRHIDGQQVRAAVNADGARLD 403 QCFSYGHA+G AA +A+R+ R I G +R +N GARLD Sbjct: 397 QCFSYGHALGVAATVALRERTPVRAIPGSVIRELLNRQGARLD 439