BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0074.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02186721.1| putative FMN oxidoreductase [alpha proteobact... 365 6e-99 ref|YP_004111142.1| NADH:flavin oxidoreductase/NADH oxidase [Rho... 354 1e-95 ref|NP_950027.1| putative FMN oxidoreductase [Rhodopseudomonas p... 353 3e-95 ref|YP_484503.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodop... 350 2e-94 ref|YP_568130.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodop... 348 7e-94 >ref|ZP_02186721.1| putative FMN oxidoreductase [alpha proteobacterium BAL199] gb|EDP66958.1| putative FMN oxidoreductase [alpha proteobacterium BAL199] Length = 387 Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 186/351 (52%), Positives = 235/351 (66%), Gaps = 2/351 (0%) Query: 1 MVHYSCEPGNTCGAFHLVHLGRYALGGFGLVFVEVTAVEEVGLTNENDLGIWNDEQAESF 60 M YS G +HLVH G++A+GG G VFVE T V E G G++N Q +F Sbjct: 28 MDQYSAVDGVPT-TYHLVHYGKFAMGGAGSVFVEATGVSEDGRITNGCPGLYNAAQVAAF 86 Query: 61 KPLVAFMKRQGTAIGIQIGHGGRKSSAQSAMQGMGPLTEENLKAGARIWQPVGPTAEPVA 120 +P+ F+K+Q + +QIGHGGRK+S Q +G GP+T + G R+W+P GP+ +A Sbjct: 87 RPITDFIKQQRSIPAVQIGHGGRKASTQRPWEGGGPVTAAEIARGDRLWKPFGPSENALA 146 Query: 121 KGWLTPRQLTTAECKAMVGTWAAAARRAVAAGFDTIEIHTAHGYLLASFLSPVSNTRNDE 180 +GWLTP+ + A+ +A AA RA AGFD +EIH AHGYLL SFLSP+SN R+D Sbjct: 147 EGWLTPKMMDDADLARTRQNFADAAERAGEAGFDIVEIHMAHGYLLQSFLSPLSNKRSDG 206 Query: 181 YGGDRAGRMRLPLEIVEAVRREMPADMPLFVRVSSVDGTVEGWNMDDTVAFAHELKARGV 240 YGGDRAGRMR PLE+ EAVR P D PLFVR+SSVDG +GW MDD+VA AHELKA G+ Sbjct: 207 YGGDRAGRMRFPLEVAEAVRAVWPKDKPLFVRISSVDGIDDGWEMDDSVALAHELKAGGI 266 Query: 241 DVVDCSSGGIS-GAATAAQVPRSLGFQVPFAERVRKEADITTMAVGIILEAQQAEAILQK 299 DV+DCSSGG S AT A + R G+QVPFAER+++E I TMAVG+I E + AE ILQ Sbjct: 267 DVIDCSSGGNSPKGATNANLTRGPGYQVPFAERIKREVGIQTMAVGLIREPELAEMILQD 326 Query: 300 GQADLIAVGRQSQFNPNIAHHWAHDLGINSRFEDWSPEFGWWLEKRIKTLQ 350 G+ADLIAVGRQ+ +P A H A I+ FE W ++ WWLEK K L+ Sbjct: 327 GRADLIAVGRQALVDPFWALHAAQHFDIDPDFEKWPHQYAWWLEKWDKGLR 377 >ref|YP_004111142.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodopseudomonas palustris DX-1] gb|ADU46409.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodopseudomonas palustris DX-1] Length = 387 Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 178/356 (50%), Positives = 233/356 (65%), Gaps = 2/356 (0%) Query: 1 MVHYSCEPGNTCGAFHLVHLGRYALGGFGLVFVEVTAVEEVGLTNENDLGIWNDEQAESF 60 M YS G +HLVHLG++A GG G+V VE TAV G DLG+WND+Q Sbjct: 26 MCQYSAVDG-VASDWHLVHLGKFAQGGAGIVMVEATAVTANGRITHGDLGLWNDDQIRPL 84 Query: 61 KPLVAFMKRQGTAIGIQIGHGGRKSSAQSAMQGMGPLTEENLKAGARIWQPVGPTAEPVA 120 + + AF++ G IQ+ H GRK+S Q G LT E+ G + W V P+A P+ Sbjct: 85 ERIAAFLRDNGAVPAIQLAHAGRKASMQRPWYGNAALTAEDAARGDQPWDIVAPSAIPMD 144 Query: 121 KGWLTPRQLTTAECKAMVGTWAAAARRAVAAGFDTIEIHTAHGYLLASFLSPVSNTRNDE 180 GWLTP++LT + ++ W +A RAV AGF+ +E+H AHGYLL SFLSP+SN R D Sbjct: 145 DGWLTPQELTDRDLDHLLDAWRSATLRAVEAGFEMLEVHCAHGYLLHSFLSPLSNQRTDA 204 Query: 181 YGGDRAGRMRLPLEIVEAVRREMPADMPLFVRVSSVDGTVEGWNMDDTVAFAHELKARGV 240 YGGDRAGRMR PLE++E VR P +PL VRVSSVDG G + D+V FA E KARG Sbjct: 205 YGGDRAGRMRFPLEVLETVRAAWPDTLPLAVRVSSVDGVEGGIELQDSVVFAREAKARGA 264 Query: 241 DVVDCSSGGISGAATAAQVPRSLGFQVPFAERVRKEADITTMAVGIILEAQQAEAILQKG 300 D++DCSSGG+ G+ATA ++PR GFQVPFAE +R EA+I T+AVG+I+ QAE I+++G Sbjct: 265 DIIDCSSGGLLGSATANRIPRGYGFQVPFAETIRTEAEIPTIAVGLIVHPDQAENIVEQG 324 Query: 301 QADLIAVGRQSQFNPNIAHHWAHDLGI-NSRFEDWSPEFGWWLEKRIKTLQGFATP 355 QADLIA+GR++ F+PN A H +L + F DW ++GWWLE+R L+ P Sbjct: 325 QADLIAIGREALFDPNWALHAQLELTEGDEAFADWPKQYGWWLERREPGLRRLDGP 380 >ref|NP_950027.1| putative FMN oxidoreductase [Rhodopseudomonas palustris CGA009] emb|CAE30133.1| putative FMN oxidoreductase [Rhodopseudomonas palustris CGA009] Length = 387 Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 175/356 (49%), Positives = 232/356 (65%), Gaps = 2/356 (0%) Query: 1 MVHYSCEPGNTCGAFHLVHLGRYALGGFGLVFVEVTAVEEVGLTNENDLGIWNDEQAESF 60 M YS G +HLVHLG++A GG G+V VE TAV G DLG+WND+Q Sbjct: 26 MCQYSAVDG-VANDWHLVHLGKFAQGGTGIVMVEATAVTANGRITHGDLGLWNDDQIRPL 84 Query: 61 KPLVAFMKRQGTAIGIQIGHGGRKSSAQSAMQGMGPLTEENLKAGARIWQPVGPTAEPVA 120 + + AF++ G IQ+ H GRK+S Q G LT E++ G + W+ V P+ P+ Sbjct: 85 ERIAAFLRDNGAVPAIQLAHAGRKASMQRPWYGNAALTAEDIARGDQPWEIVAPSPIPMD 144 Query: 121 KGWLTPRQLTTAECKAMVGTWAAAARRAVAAGFDTIEIHTAHGYLLASFLSPVSNTRNDE 180 +GWLTP++LT ++ W +A RAV AGF+ +E+H AHGYLL SFLSP+SN R D Sbjct: 145 EGWLTPQELTDDNLDYLLEAWRSATLRAVEAGFEMLEVHCAHGYLLHSFLSPLSNKRTDA 204 Query: 181 YGGDRAGRMRLPLEIVEAVRREMPADMPLFVRVSSVDGTVEGWNMDDTVAFAHELKARGV 240 YG DRAGRMR PLE++E VR P +PL +RVSSVDG G + D+V FA E KARG Sbjct: 205 YGADRAGRMRFPLEVIETVRAAWPDTLPLAIRVSSVDGVDGGIELADSVVFAREAKARGA 264 Query: 241 DVVDCSSGGISGAATAAQVPRSLGFQVPFAERVRKEADITTMAVGIILEAQQAEAILQKG 300 D++DCSSGG+ G+ATA ++PR GFQVPFAE +R EA+I T+AVG+I+ QAE I+++G Sbjct: 265 DIIDCSSGGLLGSATANRIPRGYGFQVPFAEAIRTEAEIPTIAVGLIIHPDQAEKIVEQG 324 Query: 301 QADLIAVGRQSQFNPNIAHHWAHDLGINSR-FEDWSPEFGWWLEKRIKTLQGFATP 355 QADLIA+GR++ F+PN A H +L F DW ++GWWLE+R L+ P Sbjct: 325 QADLIAIGREALFDPNWALHAQLELTEGDEVFADWPKQYGWWLERRESGLRKLDGP 380 >ref|YP_484503.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodopseudomonas palustris HaA2] gb|ABD05592.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodopseudomonas palustris HaA2] Length = 387 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 176/359 (49%), Positives = 236/359 (65%), Gaps = 5/359 (1%) Query: 1 MVHYSCEPGNTCGAFHLVHLGRYALGGFGLVFVEVTAVEEVGLTNENDLGIWNDEQAESF 60 M YS G +HLVHLG++A GG G+V VE TAV G DLG+W+D Q + Sbjct: 26 MCQYSAVDG-VANDWHLVHLGKFAQGGAGIVMVEATAVTANGRITHGDLGLWHDGQIKPL 84 Query: 61 KPLVAFMKRQGTAIGIQIGHGGRKSSAQSAMQGMGPLTEENLKAGARIWQPVGPTAEPVA 120 + + AF++ G IQ+ H GRK+S Q G LT E+ G W V P++ P+ Sbjct: 85 ERIAAFLRDNGAVPAIQLAHAGRKASMQRPWYGNAALTAEDRARGDEPWPIVAPSSVPME 144 Query: 121 KGWLTPRQLTTAECKAMVGTWAAAARRAVAAGFDTIEIHTAHGYLLASFLSPVSNTRNDE 180 GWL P++L+ + ++ W AA RAV AGF+ +E+H AHGYLL SFLSP+SN R D Sbjct: 145 DGWLMPQELSEDQLDDLLEAWRAATLRAVEAGFEMLEVHCAHGYLLHSFLSPLSNMRTDA 204 Query: 181 YGGDRAGRMRLPLEIVEAVRREMPADMPLFVRVSSVDGTVEGWNMDDTVAFAHELKARGV 240 YGG RAGRMR PL+++E VR PA +PL VRVSSVDG G + D+V FA E KARG Sbjct: 205 YGGSRAGRMRFPLQVIETVRAVWPAPLPLAVRVSSVDGVEGGIELADSVVFAREAKARGA 264 Query: 241 DVVDCSSGGISGAATAAQVPRSLGFQVPFAERVRKEADITTMAVGIILEAQQAEAILQKG 300 D++DCSSGG+ G+ATAA++PR GFQVPFAE +RKEA+I T+AVG+IL QAE+I+++G Sbjct: 265 DIIDCSSGGLLGSATAARIPRGYGFQVPFAETIRKEAEIPTIAVGLILHPDQAESIVEQG 324 Query: 301 QADLIAVGRQSQFNPNIAHHWAHDLGINSR-FEDWSPEFGWWLEKR---IKTLQGFATP 355 QADL+A+GR++ F+PN H +L + F DW ++GWWLE+R ++ L+G P Sbjct: 325 QADLVAIGREALFDPNWTLHAQLELTEDDEVFADWPKQYGWWLERREAGLRKLEGRKLP 383 >ref|YP_568130.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodopseudomonas palustris BisB5] gb|ABE38229.1| NADH:flavin oxidoreductase/NADH oxidase [Rhodopseudomonas palustris BisB5] Length = 387 Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 175/359 (48%), Positives = 236/359 (65%), Gaps = 5/359 (1%) Query: 1 MVHYSCEPGNTCGAFHLVHLGRYALGGFGLVFVEVTAVEEVGLTNENDLGIWNDEQAESF 60 M YS G +HLVHLG++A GG G+V VE TAV G D+G+W+D Q + Sbjct: 26 MCQYSAVDG-VVNDWHLVHLGKFAQGGAGIVMVEATAVTANGRITHGDVGLWHDGQVKPL 84 Query: 61 KPLVAFMKRQGTAIGIQIGHGGRKSSAQSAMQGMGPLTEENLKAGARIWQPVGPTAEPVA 120 + + AF++ G IQ+ H GRK+S Q G LT E+ G W V P+ P+ Sbjct: 85 ERIAAFLRDNGAVPAIQLAHAGRKASMQRPWYGNAALTPEDQTRGDLPWPIVAPSPIPME 144 Query: 121 KGWLTPRQLTTAECKAMVGTWAAAARRAVAAGFDTIEIHTAHGYLLASFLSPVSNTRNDE 180 +GWLTP++L+ E ++ W AA RAV AGF+ +E+H AHGYLL SFLSP+SN R D Sbjct: 145 EGWLTPQELSEDEFGELLDAWRAATLRAVEAGFEMLEVHCAHGYLLHSFLSPLSNKRTDA 204 Query: 181 YGGDRAGRMRLPLEIVEAVRREMPADMPLFVRVSSVDGTVEGWNMDDTVAFAHELKARGV 240 YGG+R GRMR PL+++E VR P +PL VR+SSVDG G + D+V FA E KARGV Sbjct: 205 YGGNRTGRMRFPLQVIETVRAVWPDTLPLAVRISSVDGVDGGIELADSVVFAREAKARGV 264 Query: 241 DVVDCSSGGISGAATAAQVPRSLGFQVPFAERVRKEADITTMAVGIILEAQQAEAILQKG 300 D++DCSSGG+ G+ATAA +PR GFQVPFAE +RKEA+I T+AVG+IL QAE+I+++G Sbjct: 265 DLIDCSSGGLLGSATAAGIPRGYGFQVPFAETIRKEAEIPTIAVGLILHPDQAESIVERG 324 Query: 301 QADLIAVGRQSQFNPNIAHHWAHDLGINSR-FEDWSPEFGWWLEKR---IKTLQGFATP 355 QADL+A+GR++ F+PN H +L F DW ++GWWLE+R ++ L+G+ P Sbjct: 325 QADLVAIGREALFDPNWTLHAQLELTEEKETFADWPKQYGWWLERRESGLRKLEGWKLP 383