BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0071.p (564 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773001.1| hypothetical protein bll6361 [Bradyrhizobium ja... 502 e-140 ref|ZP_06895980.1| beta-lactamase domain protein [Roseomonas cer... 265 2e-68 ref|ZP_03699219.1| beta-lactamase domain protein [Lutiella nitro... 242 2e-61 ref|YP_004845473.1| beta-lactamase domain containing protein [Ps... 240 6e-61 ref|YP_286078.1| Beta-lactamase-like [Dechloromonas aromatica RC... 232 1e-58 >ref|NP_773001.1| hypothetical protein bll6361 [Bradyrhizobium japonicum USDA 110] dbj|BAC51626.1| bll6361 [Bradyrhizobium japonicum USDA 110] Length = 295 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 230/295 (77%), Positives = 258/295 (87%) Query: 270 MSTSASTQVAGVYHRRLGDALVTGLSDGYVDMGYTIFRNIPEEETKAILARDHRTSPPRI 329 M S QVAGVYHR+LGD LVTGLSDGYVD+GY IFRN+ E E K +L R+HR SPPRI Sbjct: 1 MKNLPSEQVAGVYHRKLGDVLVTGLSDGYVDLGYGIFRNMQEPEIKDVLLREHRISPPRI 60 Query: 330 SVNAFAVRMDSRTYLIDCGSADLMGPTCGRLPENLAAAGIDPASVDAVLLTHVHPDHSNG 389 SVNAFA+R RTYLIDCGSAD+MGPTCGRLP NLAAAGIDPA+VD VLLTH+HPDHSNG Sbjct: 61 SVNAFALRFGGRTYLIDCGSADIMGPTCGRLPANLAAAGIDPAAVDGVLLTHIHPDHSNG 120 Query: 390 LTDAATGTRLFPNAEIIVHENEINHWFNDEAMAKAAERPRRRYFEAGRTQLKPYMAADRV 449 LTDA +GTRLFPNAE+IVHENEI+HWF+DE M +A ER RRRYFEAGR QLKPYMAADRV Sbjct: 121 LTDATSGTRLFPNAEVIVHENEIDHWFDDEEMERAPERQRRRYFEAGRIQLKPYMAADRV 180 Query: 450 KTFRKGEVLPGVTAIPIHGHTPGHAVYVVSRGGESMVVWGDTVHVPEIQVARPEVTMEFD 509 +TF+ G VLPGVTAIPI GHTPGH YV+S G +SM+VWGDTVHVPEIQVA P VTM+FD Sbjct: 181 RTFKSGSVLPGVTAIPISGHTPGHTAYVISSGDQSMIVWGDTVHVPEIQVAAPHVTMQFD 240 Query: 510 TDPEAAAAARQMMFDMVVTDDMLVGGMHLHFPGFGHMRREAGRYSLVAEQWAFEV 564 DPEAAA ARQM+FDMVVTDD+L+GGMHLHFPGFG+MRRE G+Y++ AEQWAFE+ Sbjct: 241 VDPEAAAKARQMIFDMVVTDDLLIGGMHLHFPGFGYMRREGGKYAVAAEQWAFEI 295 >ref|ZP_06895980.1| beta-lactamase domain protein [Roseomonas cervicalis ATCC 49957] gb|EFH12333.1| beta-lactamase domain protein [Roseomonas cervicalis ATCC 49957] Length = 308 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/311 (45%), Positives = 196/311 (63%), Gaps = 13/311 (4%) Query: 255 RRCSDRCKILARGRTMSTSASTQVAGVYHRRLGDALVTGLSDGYVDMGYTIFRNIPEEET 314 RR +DR M+ + QV G+ HRR+G+ +V+ +SDG+++ + I +EE Sbjct: 8 RRVTDRM--------MAAAPQAQVPGLMHRRVGEIVVSAVSDGFLNGSNATLQGIAQEEV 59 Query: 315 KAILARDHRTSPPRISVNAFAVRMDSRTYLIDCGSADLMGPTCGRLPENLAAAGIDPASV 374 A+L R +P R ++N F V R LID G + P+ G+L +LAAAG+ P +V Sbjct: 60 AAMLVGAFRPTPRRTAINTFLVWSAGRVALIDTGCGPHLQPSAGKLFAHLAAAGVPPEAV 119 Query: 375 DAVLLTHVHPDHSNGLTDAATGTRLFPNAEIIVHENEINHWFNDEAMAKAAERPRR-RYF 433 D VLLTH+HPDH+NGL D G LFP+AE+ +H+ E+ +W ++ A A+AA + YF Sbjct: 120 DTVLLTHLHPDHANGLADV-HGEALFPHAELALHQAELAYWRDEAAAARAAATGQGVPYF 178 Query: 434 EAGRTQLKPYMAADRVKTFRKG-EVLPGVTAIPIHGHTPGHAVYVVSRGGESMVVWGDTV 492 A + QL PY DR+K F G EV PGVTA+ + GHTPGH + +S G E +++WGD V Sbjct: 179 AAAQAQLAPYR--DRLKPFVDGAEVFPGVTAVHLPGHTPGHCGFRISSGHEQLLIWGDIV 236 Query: 493 HVPEIQVARPEVTMEFDTDPEAAAAARQMMFDMVVTDDMLVGGMHLHFPGFGHMRREAGR 552 HVPE+QV RPEVTM+FD +PE A A R+ MFDMV D +LV GMHLHFPG H+ RE Sbjct: 237 HVPEVQVPRPEVTMQFDVEPELAIATRRRMFDMVARDRLLVAGMHLHFPGHAHLLREGQG 296 Query: 553 YSLVAEQWAFE 563 Y L+ E + E Sbjct: 297 YRLLPEPFRLE 307 >ref|ZP_03699219.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] gb|EEG07933.1| beta-lactamase domain protein [Lutiella nitroferrum 2002] Length = 333 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/289 (44%), Positives = 174/289 (60%), Gaps = 5/289 (1%) Query: 275 STQVAGVYHRRLGDALVTGLSDGYVDMGYTIFRNIPEEETKAILARDH--RTSPPRISVN 332 TQV G Y LG+ VT L DGYVD+ + +N + +++LAR T + +VN Sbjct: 40 KTQVPGYYRMALGEFQVTALYDGYVDLDQKLLKNARARDVQSLLARMFIDTTRGVQTAVN 99 Query: 333 AFAVRMDSRTYLIDCGSADLMGPTCGRLPENLAAAGIDPASVDAVLLTHVHPDHSNGLTD 392 + V +R L+D GSA GPT G L NL AAG +PA VDAVLLTH+HPDH+ GL Sbjct: 100 GYLVHTGTRLVLVDTGSARCFGPTLGNLINNLRAAGYEPADVDAVLLTHLHPDHACGLV- 158 Query: 393 AATGTRLFPNAEIIVHENEINHWFNDEAMAKAAERPRRRYFEAGRTQLKPYMAADRVKTF 452 A G FPNA++ V E +W DEA A A + +F+ R + PY+AA+R+K + Sbjct: 159 TAEGKAAFPNADVYVARAEARYWL-DEATAAKAPPDSQPFFKMARESVAPYLAANRLKIY 217 Query: 453 RKGE-VLPGVTAIPIHGHTPGHAVYVVSRGGESMVVWGDTVHVPEIQVARPEVTMEFDTD 511 KGE +LPGVT +P GHTPGH+ Y+ S G+S+++WGD VH Q ARP++ +EFD D Sbjct: 218 GKGETLLPGVTTVPAPGHTPGHSGYLFSSKGQSLLLWGDIVHSYATQFARPDIAIEFDVD 277 Query: 512 PEAAAAARQMMFDMVVTDDMLVGGMHLHFPGFGHMRREAGRYSLVAEQW 560 + A A R+ + D + VGG HL FPG GH+R E RY+ V ++ Sbjct: 278 RQQAVATRKKLLADAARDKLWVGGAHLPFPGLGHVRAERSRYAWVPVEY 326 >ref|YP_004845473.1| beta-lactamase domain containing protein [Pseudogulbenkiania sp. NH8B] dbj|BAK75059.1| beta-lactamase domain protein [Pseudogulbenkiania sp. NH8B] Length = 333 Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 126/287 (43%), Positives = 173/287 (60%), Gaps = 5/287 (1%) Query: 277 QVAGVYHRRLGDALVTGLSDGYVDMGYTIFRNIPEEETKAILARDH--RTSPPRISVNAF 334 QV G Y LG+ VT L DGYVD+ + +N + +++LAR T + +VN + Sbjct: 42 QVPGYYRMALGEFQVTALYDGYVDLDQKLLKNARARDVQSLLARMFIDTTRGVQTAVNGY 101 Query: 335 AVRMDSRTYLIDCGSADLMGPTCGRLPENLAAAGIDPASVDAVLLTHVHPDHSNGLTDAA 394 V +R L+D GSA GPT G L NL AAG +PA +DAVLLTH+HPDH+ GL A Sbjct: 102 LVHTGTRLVLVDTGSARCFGPTLGNLINNLRAAGYEPADIDAVLLTHLHPDHACGLV-TA 160 Query: 395 TGTRLFPNAEIIVHENEINHWFNDEAMAKAAERPRRRYFEAGRTQLKPYMAADRVKTFRK 454 G FPNA++ V E +W DEA A A + +F+ R + PY+AA+R+K + K Sbjct: 161 EGKAAFPNADVYVARAEARYWL-DEASAAKATPDSQPFFKMARESVAPYLAANRLKIYGK 219 Query: 455 GE-VLPGVTAIPIHGHTPGHAVYVVSRGGESMVVWGDTVHVPEIQVARPEVTMEFDTDPE 513 GE +LPGVT +P GHTPGH+ Y+ S G+S+++WGD VH Q ARP++ +EFD D + Sbjct: 220 GETLLPGVTTVPTPGHTPGHSGYLFSSKGQSLLLWGDIVHSYATQFARPDIAIEFDVDRQ 279 Query: 514 AAAAARQMMFDMVVTDDMLVGGMHLHFPGFGHMRREAGRYSLVAEQW 560 A A R+ + D + VGG HL FPG GH+R E RY+ V ++ Sbjct: 280 QAVATRKKLLADAARDKLWVGGAHLPFPGLGHVRAERSRYAWVPVEY 326 >ref|YP_286078.1| Beta-lactamase-like [Dechloromonas aromatica RCB] gb|AAZ47608.1| Beta-lactamase-like protein [Dechloromonas aromatica RCB] Length = 327 Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/289 (41%), Positives = 176/289 (60%), Gaps = 4/289 (1%) Query: 275 STQVAGVYHRRLGDALVTGLSDGYVDMGYTIFRNIPEEETKAILARDHRTSPP-RISVNA 333 TQV G Y LG+ VT L DG +D+ + +NI + + + +LAR+ P + +VNA Sbjct: 37 KTQVPGYYRLMLGNFEVTALYDGAIDLDEKLLKNIQQRDIQRLLAREFLKGPKVQTAVNA 96 Query: 334 FAVRMDSRTYLIDCGSADLMGPTCGRLPENLAAAGIDPASVDAVLLTHVHPDHSNGLTDA 393 + + S+ L+D G+A L GP G + +NL AAG P VD VL+TH+H DH NGL Sbjct: 97 YLINTGSKLILVDAGAAKLFGPGLGNIVDNLKAAGYAPEQVDVVLVTHLHGDHVNGLV-T 155 Query: 394 ATGTRLFPNAEIIVHENEINHWFNDEAMAKAAERPRRRYFEAGRTQLKPYMAADRVKTFR 453 + G R+F NAEI + + + W ++E AKA + + +F+ R PY+AA + KTF Sbjct: 156 SEGQRVFANAEIWSAKADNDFWLSEEIAAKAP-KDFQPFFKMSRDAAAPYLAAGKWKTFD 214 Query: 454 KG-EVLPGVTAIPIHGHTPGHAVYVVSRGGESMVVWGDTVHVPEIQVARPEVTMEFDTDP 512 E+LPGVT++ HGHTPGHA Y+V G + +++ GD VH +Q A P+V +EFD DP Sbjct: 215 SDRELLPGVTSVDTHGHTPGHASYLVQSGDQRLMILGDLVHNHAVQFAHPDVAIEFDNDP 274 Query: 513 EAAAAARQMMFDMVVTDDMLVGGMHLHFPGFGHMRREAGRYSLVAEQWA 561 + A AR+ +F + + ++V GMHL FPG GH+R+E Y+ V ++A Sbjct: 275 KQAVIARKRIFRLAAKERLMVAGMHLPFPGIGHVRKEQKGYAWVPAEFA 323