BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0055.p (509 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06970819.1| AMP-dependent synthetase and ligase [Ktedonob... 211 3e-52 ref|YP_004331641.1| o-succinylbenzoate--CoA ligase [Pseudonocard... 203 5e-50 ref|ZP_01014471.1| AMP-binding enzyme [Maritimibacter alkaliphil... 197 4e-48 ref|YP_003300299.1| AMP-dependent synthetase and ligase [Thermom... 196 7e-48 ref|YP_003589956.1| AMP-dependent synthetase and ligase [Bacillu... 196 8e-48 >ref|ZP_06970819.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM 44963] gb|EFH83539.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM 44963] Length = 517 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 160/508 (31%), Positives = 247/508 (48%), Gaps = 53/508 (10%) Query: 19 YGNRPAVVDAAGTTSYAELFAKAAGVADALMQAGVGPGDAVATLFRNSADAVAATFGVML 78 Y +R AV+ ++AE++ A +++ L+ G+ GD VA L NS ++ F ++ Sbjct: 14 YPHRIAVIYGEQRLTFAEVYHHANALSNGLIALGLRKGDRVAFLLANSVQSIEIDFAILQ 73 Query: 79 AGAVEVPINPALSSDERAYCLAVANARLLITGAALATEKAAGGPSIIEVESIERTALDP- 137 AG V VP+N LS E + L + L+ A A P + V+ + P Sbjct: 74 AGLVRVPLNTRLSETEHRHMLQETETKALLFSEEFAERVEALRPQVTTVQYFCQMNGHPH 133 Query: 138 --------DALPQVDGDAP---------ARIVFTSGTTGRPKGAVHSQIGRWTA---NIL 177 D + D P A I +TSGTTG K A+HSQ G W A NIL Sbjct: 134 SSWIQSVADVVTGASIDEPPVLLREEDYATIQYTSGTTGTLKAAIHSQ-GTWVAIATNIL 192 Query: 178 LRANLPFRPDAGSNVLLMTPFSHGSSLMTHAYLSSGAAVTLLDGVDPPRVLDMLERGACD 237 +LP D +L P +H S + + GAA +L G P L +ER Sbjct: 193 --TSLPIEQD--DIMLHAAPLTHASGTLVLPHWLRGAANAILPGFQPEEYLATVERLRAT 248 Query: 238 AMFAPPTVLAKIVAAAGTRQFS--SLRTIFCGTAVLKPTLYARVKEMFGPVVRVTYGKSE 295 + PT++ +++ A Q+S S++ I G + + + R E++GP YG++E Sbjct: 249 TLNLVPTMIVMLLSHARVVQYSLNSVKRIIYGASPMPREVLRRGLELWGPKFIQYYGQTE 308 Query: 296 VFNPITVLEAEETESWYASGGED--------ACVGWPAPGVEIVIRGEDGRPAPAGGNGE 347 +T+LEA++ G+D +C G P PGV + I EDG+ P G GE Sbjct: 309 APLILTLLEAQD------HLGDDPLRQERLFSC-GRPVPGVALRIVDEDGQEVPQGTIGE 361 Query: 348 VLIRAQHLMTGY-RTTEGFSALAPNEFHETGDLGYVDARGRLHLIGRSADVIKSGGYKVA 406 + + M GY ++ E +A N + T D+GY+D +G + L+ R AD+I SGG+ + Sbjct: 362 ITVSTNQAMVGYWKSPELTNATLRNGWVHTRDMGYIDEQGYVFLVDRKADMIISGGFNIY 421 Query: 407 PEEVERLL--APALQPSEVAVVGIPSDYWGEVILAAV----ENPAPGWEERINRVVPTMT 460 P EVE +L PA+Q E AV+GIP + WGE + A V + P+ EE I+ + Sbjct: 422 PREVEEVLYQHPAVQ--EAAVIGIPDEIWGESVKAFVVCKPDYPSSE-EELIDFCKERLA 478 Query: 461 DYKRPRLLIALDELPRNGIGKILRGAIR 488 YK+PR + ++ LP+N GK++R +R Sbjct: 479 SYKKPRTIEFMETLPKNATGKVVRRVLR 506 >ref|YP_004331641.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans CB1190] gb|AEA23788.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans CB1190] Length = 491 Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 160/502 (31%), Positives = 243/502 (48%), Gaps = 53/502 (10%) Query: 16 ALRYGNRPAVVDAAGTTSYAELFAKAAGVADALMQAGVGPGDAVATLFRNSADAVAATFG 75 A R+G+ PA+ + S+ E + +ALM G+ GD VA L N D + A + Sbjct: 11 AARFGDAPAITCGDRSMSFTEFDEATDRLGNALMARGLREGDRVAVLLPNGIDGLVAYYA 70 Query: 76 VMLAGAVEVPINPALSSDERAYCLAVANARLLITGAALATEKAAGGPSIIEVESIERTAL 135 + +G V V +N + ++ Y +A + +R LI+ + +A I ++ + Sbjct: 71 LAKSGLVRVSMNVRDTMEDHEYRIADSGSRALISDRS----TSAAAELNIGLDDLAAMIA 126 Query: 136 D----PDALPQVDGDAPARIVFTSGTTGRPKGAV------HSQIGRWTANILLRANLPFR 185 D P +P+ ++P R+ +T GTTGRPK H+++ + +++ Sbjct: 127 DGPDGPCDVPRA-AESPYRLGYTGGTTGRPKAVTLSMRSEHAEVTNYLLDLV-------- 177 Query: 186 PDAGSNVLLM--TPFSHGSSLMTHAYLSSGAAVTLLDGVDPPRVLDMLERGACDAMFAPP 243 PD G +++ P +H S +L GA +L P L+ L+R A F P Sbjct: 178 PDIGPGDVMLHAAPVTHASGSFFLPHLIRGAHNVVLPSFTPGEYLEELQRSRPTATFLVP 237 Query: 244 TVLAKIVAAAGTRQFSS--LRTIFCGTAVLKPTLYARVKEMFGPVVRVTYGKSEVFNPIT 301 T+LA ++ G + + LR + G + + PT R +++FG V+ TYG+SE IT Sbjct: 238 TMLAMVLDHPGVTEVRTPRLRHLCYGASPIAPTTVERAEQVFGKVLAQTYGQSEAPMTIT 297 Query: 302 VLEAEETESWYASGGEDACVGWPAPGVEIVIRGEDGRPAPAGGNGEVLIRAQHLMTGY-- 359 +L +E + G P +E+ + ED R P G +GEV++R Q LM+GY Sbjct: 298 LLRPDEHDRV-------GSAGRPYSMIEVRVVDEDDREVPVGTSGEVVVRGQILMSGYWN 350 Query: 360 RTTEGFSALAPNEFHETGDLGYVDARGRLHLIGRSADVIKSGGYKVAPEEVERLLAPALQ 419 R E L H TGD+G D G L+L+ R DVI SGG+ V P EVE L Sbjct: 351 RPEETAHTLRHGWLH-TGDVGTFDDDGFLYLLDRKNDVIISGGFNVYPREVEDCLLGHPA 409 Query: 420 PSEVAVVGIPSDYWGEVILAAVENPAP-------GW-EERINRVVPTMTDYKRPRLLIAL 471 E AV+G+P + WGEV+ A V P GW ER + YKRPR +I Sbjct: 410 VREAAVIGLPDERWGEVVHAVVATREPITADTLLGWARER-------LAGYKRPRSVIFS 462 Query: 472 DELPRNGIGKILRGAIRTDVLS 493 D+LP++ GKILR A+R D LS Sbjct: 463 DDLPKSSAGKILRRAVR-DQLS 483 >ref|ZP_01014471.1| AMP-binding enzyme [Maritimibacter alkaliphilus HTCC2654] gb|EAQ11968.1| AMP-binding enzyme [Rhodobacterales bacterium HTCC2654] Length = 499 Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 164/497 (32%), Positives = 236/497 (47%), Gaps = 26/497 (5%) Query: 8 WADEFSALALRYGNRPAVVDAAGTTS-YAELFAKAAGVADALMQAGVGPGDAVATLFRNS 66 W + +A+ +G+RPA+ + YA +AAGV AL + G+ PGD VA +N Sbjct: 6 WLERVAAV---HGDRPALFTGETCVADYAAFRDRAAGVGAALTERGIAPGDRVAIFMKNV 62 Query: 67 ADAVAATFGVMLAGAVEVPINPALSSDERAYCLAVANARLLITGAALATEKA-AGGPSII 125 + + A +G+ +AGA VPIN L E AY L + AR + LA A A II Sbjct: 63 PEYLIALYGIWVAGAAAVPINAKLHPREAAYILDDSGARAVFATDGLAQGLAEATAVPII 122 Query: 126 EVESIERTALD-PDALPQVDGDAPARIVFTSGTTGRPKGAVHSQIGRWTANILLRANLPF 184 ++ + A+ P A+ GD A + +TSGTTGRPKG V T IL +L + Sbjct: 123 AMDDLSAMAVHAPRAIAPRAGDDLAWLFYTSGTTGRPKGVV------LTHEILQVVSLSY 176 Query: 185 RPD-----AGSNVLLMTPFSHGSSLMTHAYLSSGA--AVTLLDGVDPPRVLDMLERGACD 237 D A M P SHG+ L ++ GA G +P +LD R Sbjct: 177 LADVDEVSAEDGAFYMAPMSHGAGLYALVHVLKGARHICPASGGFEPAELLDAARRMGPL 236 Query: 238 AMFAPPTVLAKIV---AAAGTRQFSSLRTIFCGTAVLKPTLYARVKEMFGPVVRVTYGKS 294 MF PT++ +I +AAG R ++TI G + + + FGP YG+ Sbjct: 237 HMFMAPTMVRRITDAASAAGDRA-EGIKTIVYGGGPMYVSDIVEAVDWFGPKFVQIYGQG 295 Query: 295 EVFNPITVLEAEE-TESWYASGGED-ACVGWPAPGVEIVIRGEDGRPAPAGGNGEVLIRA 352 E IT L +E T+ + E A VG VE+ I +G P G GE+++R Sbjct: 296 ECPMGITALSRDEVTDRTHPRWRERLASVGRAQSVVEVAIGDAEGNPVAPGDTGEIMVRG 355 Query: 353 QHLMTGY-RTTEGFSALAPNEFHETGDLGYVDARGRLHLIGRSADVIKSGGYKVAPEEVE 411 + +M GY + E + N + TGD+G +DA G L + RS DVI SGG + P EVE Sbjct: 356 RVVMPGYWQNPEATAKTIRNGWLMTGDMGTLDADGYLTMKDRSKDVIISGGTNIYPREVE 415 Query: 412 RLLAPALQPSEVAVVGIPSDYWGEVILAAVENPAPGWEERINRVVPTMTDYKRPRLLIAL 471 L EV+V+G PS WGE ++A V V+ + +KRP+ Sbjct: 416 EALLTHPAVREVSVIGRPSAEWGEDVVAFVVATGVDEAALDAHVLAQIARFKRPKAYFFT 475 Query: 472 DELPRNGIGKILRGAIR 488 D+LP+N GK+L+ +R Sbjct: 476 DDLPKNNYGKVLKTELR 492 >ref|YP_003300299.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM 43183] gb|ACY98261.1| AMP-dependent synthetase and ligase [Thermomonospora curvata DSM 43183] Length = 507 Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 168/521 (32%), Positives = 237/521 (45%), Gaps = 63/521 (12%) Query: 7 HWADEFSALALRYGNRPAVVDAAGTTSYAELFAKAAGVADALMQAGVGPGDAVATLFRNS 66 ++++ ALR +R A+VD G +YAEL A+ A AL AGV P D V L RN+ Sbjct: 5 NFSETLRLQALRRADREALVDGDGRWTYAELDAEVDRHAAALRDAGVTPSDLVGVLGRNT 64 Query: 67 ADAVAATFGVMLAGAVEVPINPALSSDERAYCL--------------------------- 99 A + + GA+ VP+N L E+AY + Sbjct: 65 ATYIFELLALSRLGAIGVPLNWRLHPAEQAYIIGHAGITGLLYDDDFRDVAEHVARHTDL 124 Query: 100 --AVANARLLITGAALATEKAAGGPSIIEVESIERTALDPDALPQVDGDAPARIVFTSGT 157 VAN + +I GA + A P + V E+ D D R+++TSGT Sbjct: 125 RVTVANQQEVIEGAVRLEDLLAAQPPGVRVADAEK-----------DSDDIHRLLYTSGT 173 Query: 158 TGRPKGAVHSQIGRWTANILLRAN-LPFRPDAGSNVLLMTPFSHGSSLMT--HAYLSSGA 214 T RPKG +H+ G AN RA L +L+ P H S L A +GA Sbjct: 174 TSRPKGVIHT-YGNLIAN--HRAQLLELELTQADRILISAPLFHVSGLEAPGLATFVAGA 230 Query: 215 AVTLLDGVDPPRVLDMLERGACDAMFAPPTVLAKIVAAAGTRQFSSLR-TIFCGTAVLKP 273 + L P + ++ + +L ++ F S+R +F G A P Sbjct: 231 TMVLTPSFKAPDIARIVAEERITGLVLAAQILFDLMKLDPRPDFDSVRYLLFAGVA---P 287 Query: 274 TLYARVKEMFGPVVRV--TYGKSEVFNPITVLEAEETESWYASGGEDACVGWPAPGVEIV 331 + RVK MF P VR T+G +E+ N ++A ES AC G P PGV I Sbjct: 288 EVRRRVKRMF-PHVRTIDTFGMTELTNGACYMDAAHEESKLG-----AC-GAPFPGVHIR 340 Query: 332 IRGEDGRPAPAGGNGEVLIRAQHLMTGY-RTTEGFSALAPNEFHETGDLGYVDARGRLHL 390 I ED RP P G GE+++R + GY R E + + TGD+G +D G L Sbjct: 341 IVDEDFRPVPPGVPGEIIVRGDKVSPGYWRDEEANRRTRRDGWFRTGDVGRLDEDGYLWF 400 Query: 391 IGRSADVIKSGGYKVAPEEVERLLAPALQPSEVAVVGIPSDYWGEVILAAV--ENPAPGW 448 + R D+IKSGG +A EVER++A +EVAV+G+P + W EV A V PAP Sbjct: 401 VDRRTDLIKSGGENIAGAEVERVIAEHPLVAEVAVIGVPDERWDEVPKAFVILREPAPEA 460 Query: 449 EERINR-VVPTMTDYKRPRLLIALDELPRNGIGKILRGAIR 488 E I R + + YK P+ + +D LPRN GK+L+ +R Sbjct: 461 AEEIRRHCLNNLAKYKVPKYIEVVDALPRNDSGKVLKTKLR 501 >ref|YP_003589956.1| AMP-dependent synthetase and ligase [Bacillus tusciae DSM 2912] gb|ADG06812.1| AMP-dependent synthetase and ligase [Bacillus tusciae DSM 2912] Length = 520 Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 152/506 (30%), Positives = 238/506 (47%), Gaps = 41/506 (8%) Query: 16 ALRYGNRPAVVDAAGTTSYAELFAKAAGVADALMQAGVGPGDAVATLFRNSADAVAATFG 75 A+ + N AV + +++E++ A +A+ L+ G+ GD VA L NSA +VA F Sbjct: 12 AVYFANEHAVRFGDTSLTFSEVYGYANRLANFLLHLGLQKGDRVAFLLANSAHSVAIDFA 71 Query: 76 VMLAGAVEVPINPALSSDERAYCLAVANARLLITGAALATEK--------AAGGPSIIE- 126 ++L+G V VP+N LS E + + A+ LI + P +IE Sbjct: 72 MILSGLVRVPLNTRLSLRELEHMVRETEAKALIFSENFTQQADHLRQHVPTLRWPILIEG 131 Query: 127 -----------VESIERTALDPDA-LPQVDGDAPARIVFTSGTTGRPKGAVHSQIGRWTA 174 E + T +P L + D P I +TSGTTG+ K AVH+Q G W+A Sbjct: 132 MANADWMLAAQAEMVRYTDDEPSVKLSETD---PVTIQYTSGTTGQLKAAVHTQ-GTWSA 187 Query: 175 ---NILLRANLPFRPDAGSNVLLMTPFSHGSSLMTHAYLSSGAAVTLLDGVDPPRVLDML 231 NIL R D G +L P +H S + + GA +L G P L+ + Sbjct: 188 ITTNILT----AIRIDRGDIMLHAAPLTHASGTLVLPHWIRGATNAILPGFKPAEFLEAV 243 Query: 232 ERGACDAMFAPPTVLAKIVAA--AGTRQFSSLRTIFCGTAVLKPTLYARVKEMFGPVVRV 289 +R + PT++ ++A F+S+R I G + + R ++G + Sbjct: 244 KRIRPTTLNLVPTMITMLLAHPDVADVSFASVRQIIYGASPMPSETLKRAISLWGHIFIQ 303 Query: 290 TYGKSEVFNPITVLEAEETESWYASGGEDACV---GWPAPGVEIVIRGEDGRPAPAGGNG 346 YG++E +TVL+ ++ + + + + G P E+ I E G+P P G G Sbjct: 304 YYGQTECPLILTVLDIDDHKRALSDPQAEHILLSCGRPTAVTELQILDEQGKPVPPGEIG 363 Query: 347 EVLIRAQHLMTGYRTTEGFSALAPNE-FHETGDLGYVDARGRLHLIGRSADVIKSGGYKV 405 E+ +R+ M GY +A + + T D+GYVD G ++L+ R +D+I SGG+ + Sbjct: 364 EIAVRSTQQMIGYFQAPELTADTIKDGWVHTRDMGYVDTEGYVYLVDRKSDMIISGGFNI 423 Query: 406 APEEVERLLAPALQPSEVAVVGIPSDYWGEVILAAV---ENPAPGWEERINRVVPTMTDY 462 P EVE +L E AVVGIP D WGEV A V E + E I + Y Sbjct: 424 YPREVEEVLYKHPAVLEAAVVGIPHDQWGEVGKAFVVLKEGQSATEEALIEHCRKYLAGY 483 Query: 463 KRPRLLIALDELPRNGIGKILRGAIR 488 KRP + +D LP++ +GK++R +R Sbjct: 484 KRPHSIEFVDHLPKSAVGKVVRRLLR 509