BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0120.0048.p         (137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001204860.1| hypothetical protein BRADO2813 [Bradyrhizobi...   186   9e-46
ref|YP_001241252.1| hypothetical protein BBta_5371 [Bradyrhizobi...   185   2e-45
ref|ZP_01047234.1| hypothetical protein NB311A_19637 [Nitrobacte...   172   2e-41
ref|ZP_08629687.1| hypothetical protein CSIRO_2781 [Bradyrhizobi...   171   4e-41
ref|ZP_08627681.1| hypothetical protein CSIRO_0743 [Bradyrhizobi...   165   2e-39

>ref|YP_001204860.1| hypothetical protein BRADO2813 [Bradyrhizobium sp. ORS 278]
 emb|CAL76623.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 137

 Score =  186 bits (473), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 91/137 (66%), Positives = 104/137 (75%)

Query: 1   MGSKSREYTFGATVRHLAEPVKEARLVADGAACRAWNARILAFQGPAQPSPALGDALNAG 60
           M +KSRE  +GA +R   E    AR  AD  AC AWN R+L ++GPAQPSP LGDALNAG
Sbjct: 1   MTTKSRERLYGAGIRIAQEQAARARKEADRLACDAWNKRMLGYKGPAQPSPLLGDALNAG 60

Query: 61  FRYLEVTCLGCETHQTVALDIVRRPKWTPIHELERYMRCKLCSLRSGYPFKRSHLVVLRT 120
           + YLEV CLGC+T+QTVALDI+RR K TPIHELERYMRC+ CS R+G P+KRS LV LR 
Sbjct: 61  YYYLEVRCLGCDTNQTVALDIIRRAKTTPIHELERYMRCQDCSRRTGRPYKRSALVALRE 120

Query: 121 TKISAMNPPSTLWPGER 137
           TKISA  P ST WPGER
Sbjct: 121 TKISAAYPASTWWPGER 137


>ref|YP_001241252.1| hypothetical protein BBta_5371 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37346.1| hypothetical protein BBta_5371 [Bradyrhizobium sp. BTAi1]
          Length = 137

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 90/137 (65%), Positives = 105/137 (76%)

Query: 1   MGSKSREYTFGATVRHLAEPVKEARLVADGAACRAWNARILAFQGPAQPSPALGDALNAG 60
           M ++SRE  +GA +R   E    AR  AD  AC AWN R+L ++GPAQPSP LGDALNAG
Sbjct: 1   MTTRSRERLYGAGIRIAQEQAARARKEADRLACAAWNKRMLGYKGPAQPSPLLGDALNAG 60

Query: 61  FRYLEVTCLGCETHQTVALDIVRRPKWTPIHELERYMRCKLCSLRSGYPFKRSHLVVLRT 120
           + YLEV CLGC+T+QTVALDI+RRPK TPIHELERYMRC+ CS   G+P+KRS LV LR 
Sbjct: 61  YFYLEVRCLGCDTNQTVALDIIRRPKTTPIHELERYMRCQDCSRLRGHPYKRSALVALRE 120

Query: 121 TKISAMNPPSTLWPGER 137
           TKISA +P ST WPGER
Sbjct: 121 TKISAAHPASTWWPGER 137


>ref|ZP_01047234.1| hypothetical protein NB311A_19637 [Nitrobacter sp. Nb-311A]
 gb|EAQ34816.1| hypothetical protein NB311A_19637 [Nitrobacter sp. Nb-311A]
          Length = 138

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/138 (63%), Positives = 98/138 (71%), Gaps = 1/138 (0%)

Query: 1   MGSKSREYTFGATVRHLAEPVKEARLVADGAACRAWNARILAFQGPAQPSPALGDALNAG 60
           M +KSRE+ +G +VR  A+   EAR  AD  AC AW+ R+L F+GPAQPSP LGDALNAG
Sbjct: 1   MTTKSREHLYGTSVRMSAQRAMEARKEADKLACIAWSQRMLGFRGPAQPSPTLGDALNAG 60

Query: 61  FRYLEVTCLGCETHQTVALDIVRRPK-WTPIHELERYMRCKLCSLRSGYPFKRSHLVVLR 119
           FRYLEV C GCE H TV L  VRRPK  TPIHELER M CK CS   GY +KR  LV LR
Sbjct: 61  FRYLEVRCAGCELHSTVDLTTVRRPKETTPIHELERRMACKDCSRMRGYRYKRGQLVALR 120

Query: 120 TTKISAMNPPSTLWPGER 137
            T ISA +PPS  WPGER
Sbjct: 121 QTPISASDPPSVWWPGER 138


>ref|ZP_08629687.1| hypothetical protein CSIRO_2781 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07542.1| hypothetical protein CSIRO_2781 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 137

 Score =  171 bits (433), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 102/137 (74%)

Query: 1   MGSKSREYTFGATVRHLAEPVKEARLVADGAACRAWNARILAFQGPAQPSPALGDALNAG 60
           M +KSRE  FG+++   AE  K AR  AD  AC+AW  R+L + GPAQPSP +GDALNA 
Sbjct: 1   MSTKSRERLFGSSIAAAAEKAKHARREADILACQAWTLRMLGYGGPAQPSPTIGDALNAS 60

Query: 61  FRYLEVTCLGCETHQTVALDIVRRPKWTPIHELERYMRCKLCSLRSGYPFKRSHLVVLRT 120
             +LEV CLGCETH TV L IVRRPK TP+HELER+MRCK CS   GYP+KRSHLV LR 
Sbjct: 61  LCFLEVKCLGCETHSTVDLTIVRRPKETPVHELERWMRCKDCSKLRGYPYKRSHLVALRA 120

Query: 121 TKISAMNPPSTLWPGER 137
           TKISA +PP+  +PGER
Sbjct: 121 TKISASDPPTHGYPGER 137


>ref|ZP_08627681.1| hypothetical protein CSIRO_0743 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09585.1| hypothetical protein CSIRO_0743 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 137

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/137 (61%), Positives = 100/137 (72%)

Query: 1   MGSKSREYTFGATVRHLAEPVKEARLVADGAACRAWNARILAFQGPAQPSPALGDALNAG 60
           M +KSRE  FG+++   AE  K AR  AD  AC+AW  R+L + GPAQPSP + DALNA 
Sbjct: 1   MSTKSRERLFGSSIAAAAEKAKHARQQADLLACQAWTLRMLGYGGPAQPSPTIADALNAR 60

Query: 61  FRYLEVTCLGCETHQTVALDIVRRPKWTPIHELERYMRCKLCSLRSGYPFKRSHLVVLRT 120
             +LEV CLGCETH TV L IVRRPK TP++ELER+MRCK CS   GYP+KRSHLV LR 
Sbjct: 61  LCFLEVKCLGCETHSTVDLTIVRRPKDTPVYELERWMRCKDCSKMRGYPYKRSHLVALRA 120

Query: 121 TKISAMNPPSTLWPGER 137
           TKIS  +PP+  +PGER
Sbjct: 121 TKISVTDPPTHGYPGER 137