BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0030.p (165 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_317729.1| heat shock protein Hsp20 [Nitrobacter winograds... 231 2e-59 ref|YP_571741.1| heat shock protein Hsp20 [Nitrobacter hamburgen... 191 4e-47 ref|NP_771874.1| small heat shock protein [Bradyrhizobium japoni... 185 2e-45 ref|YP_318725.1| heat shock protein Hsp20 [Nitrobacter winograds... 180 6e-44 ref|NP_771861.1| small heat shock protein [Bradyrhizobium japoni... 179 1e-43 >ref|YP_317729.1| heat shock protein Hsp20 [Nitrobacter winogradskyi Nb-255] gb|ABA04377.1| heat shock protein Hsp20 [Nitrobacter winogradskyi Nb-255] Length = 162 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 106/164 (64%), Positives = 134/164 (81%), Gaps = 3/164 (1%) Query: 1 MGIRDLVPWTKGQELSTRREGFDPFLTLHREMNRLFDDAFRGFGSLGRVNTPLMEGQFSW 60 M IRDL+PW++ QE+++ R +DPF+TLHREMNRLFDD FR F TPLMEG+F W Sbjct: 1 MAIRDLIPWSRNQEVTSARASYDPFMTLHREMNRLFDDVFRSFEP---GQTPLMEGRFGW 57 Query: 61 PRLELSETDKEVSVSAELPGLSEKDVQVEIVNGVLSIRGERKAEHSDDSKFVSERYYGSF 120 PR+EL ETDK V+VSAELPG++EKDVQVEI NG L+IRGE+K E ++ K+V+ERYYGSF Sbjct: 58 PRIELGETDKAVTVSAELPGMTEKDVQVEIANGTLTIRGEKKNERANGGKYVTERYYGSF 117 Query: 121 ERQISLDGVEEDKAKAEFKNGVLTVTLPKSEQSRSSVKRIAINS 164 +RQI LD V+EDKA+A F+NGVLT++LPKS R+ VKRIAI++ Sbjct: 118 QRQIPLDDVDEDKAEASFRNGVLTISLPKSANPRAGVKRIAIST 161 >ref|YP_571741.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] ref|YP_571957.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] gb|ABE64909.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] gb|ABE65125.1| heat shock protein Hsp20 [Nitrobacter hamburgensis X14] Length = 166 Score = 191 bits (484), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 97/167 (58%), Positives = 120/167 (71%), Gaps = 4/167 (2%) Query: 1 MGIRDLVPWTKGQELSTRREGFD--PFLTLHREMNRLFDDAFRGFGSLGRVNTPLMEGQF 58 MGI+DL+PW G T G D PF TLHREMNR+FDD FRGF L +P Sbjct: 1 MGIKDLIPWNNGGREVTIHRGADVNPFFTLHREMNRIFDDVFRGF-DLAPFGSPPRLSGL 59 Query: 59 SWPRLELSETDKEVSVSAELPGLSEKDVQVEIVNGVLSIRGERKAEHSDDSKFVSERYYG 118 WP++++ ETDKEV ++AELPGL EKDV +EI NGVLSI GE+K+E D ++ SERYYG Sbjct: 60 GWPQIDIDETDKEVRITAELPGLDEKDVSLEIANGVLSISGEKKSESEDKARRFSERYYG 119 Query: 119 SFERQISLDGVEEDKAKAEFKNGVLTVTLPKSEQSRSSVKRIAINSN 165 FER+I L +EEDKA A FKNGVLTVT+PKS +++ +V+RIAIN N Sbjct: 120 RFERRIQLQDIEEDKASAAFKNGVLTVTVPKSVEAK-NVRRIAINRN 165 >ref|NP_771874.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] gb|AAC44757.1| small heat shock protein HspC [Bradyrhizobium japonicum] dbj|BAC50499.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] Length = 166 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 93/167 (55%), Positives = 123/167 (73%), Gaps = 4/167 (2%) Query: 1 MGIRDLVPWTKG-QELSTRREG-FDPFLTLHREMNRLFDDAFRGFGSLGRVNTPLMEGQF 58 MGI+DL+PW G +E+ R +PFLTLHREMNR+FD+ FRGF L + Sbjct: 1 MGIKDLIPWNNGGREVGIHRGADVNPFLTLHREMNRMFDEVFRGF-DLAPFGSSRGLSGL 59 Query: 59 SWPRLELSETDKEVSVSAELPGLSEKDVQVEIVNGVLSIRGERKAEHSDDSKFVSERYYG 118 WP++++ ETDKEV ++AELPGL EKDV +EI NGVLSI GE+K+E D ++ SERYYG Sbjct: 60 GWPQIDIDETDKEVRITAELPGLEEKDVSLEIANGVLSISGEKKSESEDKARRFSERYYG 119 Query: 119 SFERQISLDGVEEDKAKAEFKNGVLTVTLPKSEQSRSSVKRIAINSN 165 FER+I L+G++EDK A FKNGVLT+T+PKS +++ +V+RIAIN N Sbjct: 120 RFERRIPLEGIDEDKVSAAFKNGVLTITVPKSAEAK-NVRRIAINRN 165 >ref|YP_318725.1| heat shock protein Hsp20 [Nitrobacter winogradskyi Nb-255] gb|ABA05373.1| heat shock protein Hsp20 [Nitrobacter winogradskyi Nb-255] Length = 166 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 88/164 (53%), Positives = 118/164 (71%), Gaps = 1/164 (0%) Query: 1 MGIRDLVPWTKGQELSTRR-EGFDPFLTLHREMNRLFDDAFRGFGSLGRVNTPLMEGQFS 59 M +RDL+PW + + +R E PFLTLHREMNRLFDD FRG + + +S Sbjct: 1 MSMRDLIPWNRSSRVPVQRGEEGTPFLTLHREMNRLFDDVFRGLDLNPFRFDRVFDRAWS 60 Query: 60 WPRLELSETDKEVSVSAELPGLSEKDVQVEIVNGVLSIRGERKAEHSDDSKFVSERYYGS 119 WP +E+SE DKEV V+AELPGL EKDV+V++ NGVL+I+GE++ E D+ + SER+YG Sbjct: 61 WPSIEVSENDKEVRVTAELPGLEEKDVEVQLSNGVLAIKGEKRTETEDNDRLFSERFYGR 120 Query: 120 FERQISLDGVEEDKAKAEFKNGVLTVTLPKSEQSRSSVKRIAIN 163 FER+I +D ++EDK A F NGVL VTLP+S +++ +VKRIAIN Sbjct: 121 FERRIPVDDIDEDKVNASFGNGVLVVTLPRSAEAQRNVKRIAIN 164 >ref|NP_771861.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] emb|CAA05837.1| HspF [Bradyrhizobium japonicum] dbj|BAC50486.1| small heat shock protein [Bradyrhizobium japonicum USDA 110] Length = 163 Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 92/165 (55%), Positives = 117/165 (70%), Gaps = 6/165 (3%) Query: 1 MGIRDLVPWTKG-QELSTRREGFD-PFLTLHREMNRLFDDAFRGFGSLGRVNTPLMEGQF 58 M +R+L+PW G + L RR D PFL+LHREMNRLFDD FRG +G+ P G Sbjct: 1 MALRELIPWNNGSRNLPARRTEVDNPFLSLHREMNRLFDDVFRGV-DIGQFAPPATMG-- 57 Query: 59 SWPRLELSETDKEVSVSAELPGLSEKDVQVEIVNGVLSIRGERKAEHSDDSKFVSERYYG 118 WP +E +ETDKEV V AELPG+ +KDV+VE+ +GVL+I GE+K+E D + SERYYG Sbjct: 58 -WPSVEFNETDKEVKVIAELPGIEQKDVEVELADGVLTISGEKKSETKDKERRFSERYYG 116 Query: 119 SFERQISLDGVEEDKAKAEFKNGVLTVTLPKSEQSRSSVKRIAIN 163 FER+I +D V++DK A FK+G+LTVTLPKS + VKRIAIN Sbjct: 117 RFERRIPVDDVDQDKVAASFKDGILTVTLPKSPTEQRKVKRIAIN 161