BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0120.0017.p         (272 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773619.1| chaperonin GroEL [Bradyrhizobium japonicum USDA...   468   e-130
ref|NP_768699.1| chaperonin GroEL [Bradyrhizobium japonicum USDA...   461   e-128
ref|YP_004109663.1| chaperonin GroEL [Rhodopseudomonas palustris...   460   e-127
ref|ZP_07028531.1| chaperonin GroEL [Afipia sp. 1NLS2] >gi|29859...   458   e-127
ref|YP_001991446.1| chaperonin GroEL [Rhodopseudomonas palustris...   457   e-127

>ref|NP_773619.1| chaperonin GroEL [Bradyrhizobium japonicum USDA 110]
 sp|P35861.2|CH602_BRAJA RecName: Full=60 kDa chaperonin 2; AltName: Full=GroEL protein 2;
           AltName: Full=Protein Cpn60 2
 emb|CAA80318.1| GroEL2 [Bradyrhizobium japonicum]
 dbj|BAC52244.1| chaperonin [Bradyrhizobium japonicum USDA 110]
          Length = 550

 Score =  468 bits (1204), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/251 (94%), Positives = 245/251 (97%)

Query: 7   WXDRRKAILEDIAILTGGTAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVSGAGKKA 66
           + DRRKA+L+DIAILTGG AISEDLGIKLENVTL MLGRAKKVMIDKENTTIVSGAGKKA
Sbjct: 281 FGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLNMLGRAKKVMIDKENTTIVSGAGKKA 340

Query: 67  DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 126
           DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM
Sbjct: 341 DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400

Query: 127 HATRAAVEEGILPGGGVALLRASEHLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGE 186
           HATRAAVEEGILPGGGVALLRASEHLKG+RTKNDDQKTGVEIVRKALS PARQIAINAGE
Sbjct: 401 HATRAAVEEGILPGGGVALLRASEHLKGIRTKNDDQKTGVEIVRKALSYPARQIAINAGE 460

Query: 187 DGSVIVGKILEKDQYGYGFDSQSGEYGNLVTKGIIDPTKVVRVAIQNAASVAALLITTEA 246
           DGSVIVGKILEKDQY YG+DSQ+GEYGNLV+KGIIDPTKVVRVAIQNAASVAALLITTEA
Sbjct: 461 DGSVIVGKILEKDQYSYGYDSQTGEYGNLVSKGIIDPTKVVRVAIQNAASVAALLITTEA 520

Query: 247 MVAELPKKNAG 257
           MVAE+PKKN G
Sbjct: 521 MVAEVPKKNTG 531


>ref|NP_768699.1| chaperonin GroEL [Bradyrhizobium japonicum USDA 110]
 sp|P35862.2|CH603_BRAJA RecName: Full=60 kDa chaperonin 3; AltName: Full=GroEL protein 3;
           AltName: Full=Protein Cpn60 3
 gb|AAG61029.1|AF322013_148 GroEL3 [Bradyrhizobium japonicum]
 emb|CAA80316.1| GroEL3 [Bradyrhizobium japonicum]
 dbj|BAC47324.1| GroEL3 chaperonin [Bradyrhizobium japonicum USDA 110]
          Length = 546

 Score =  461 bits (1185), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/266 (86%), Positives = 248/266 (93%)

Query: 7   WXDRRKAILEDIAILTGGTAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVSGAGKKA 66
           + DRRKA+L+DIAILTGG AISEDLGIKLENVTL MLGRAKKVMIDKENTTIV+GAGKKA
Sbjct: 281 FGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLNMLGRAKKVMIDKENTTIVNGAGKKA 340

Query: 67  DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 126
           DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM
Sbjct: 341 DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400

Query: 127 HATRAAVEEGILPGGGVALLRASEHLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGE 186
           HATRAAVEEGI+PGGGVALLRASE LKGLRT+NDDQKTGVEIVRKALS PARQIAINAGE
Sbjct: 401 HATRAAVEEGIVPGGGVALLRASEQLKGLRTENDDQKTGVEIVRKALSWPARQIAINAGE 460

Query: 187 DGSVIVGKILEKDQYGYGFDSQSGEYGNLVTKGIIDPTKVVRVAIQNAASVAALLITTEA 246
           DGS++VGK+L+ +QY +GFD+Q+GEY NLV+KGIIDP KVVR+A+QNA+SVA LLITTEA
Sbjct: 461 DGSIVVGKVLDNEQYSFGFDAQTGEYSNLVSKGIIDPAKVVRIAVQNASSVAGLLITTEA 520

Query: 247 MVAELPKKNAGGGGIPQGGGMGGMDF 272
           MVAELPKK   G  +P   GMGGMDF
Sbjct: 521 MVAELPKKATAGPAMPAAPGMGGMDF 546


>ref|YP_004109663.1| chaperonin GroEL [Rhodopseudomonas palustris DX-1]
 gb|ADU44930.1| chaperonin GroEL [Rhodopseudomonas palustris DX-1]
          Length = 546

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/249 (93%), Positives = 243/249 (97%)

Query: 7   WXDRRKAILEDIAILTGGTAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVSGAGKKA 66
           + DRRKA+L+DIAILTGG AISEDLGIK+ENVTLQMLGRAKKVMIDKENTTIV+GAGKKA
Sbjct: 281 FGDRRKAMLQDIAILTGGQAISEDLGIKMENVTLQMLGRAKKVMIDKENTTIVNGAGKKA 340

Query: 67  DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 126
           DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM
Sbjct: 341 DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400

Query: 127 HATRAAVEEGILPGGGVALLRASEHLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGE 186
           HATRAAVEEGI+PGGGVALLRASE LKGLRTKNDDQKTGVEIVR+ALSAPARQIAINAGE
Sbjct: 401 HATRAAVEEGIVPGGGVALLRASEQLKGLRTKNDDQKTGVEIVRRALSAPARQIAINAGE 460

Query: 187 DGSVIVGKILEKDQYGYGFDSQSGEYGNLVTKGIIDPTKVVRVAIQNAASVAALLITTEA 246
           DGSVIVGK+LEK+QY YGFDSQSGEYG+LV KGIIDPTKVVR AIQNAASVAALLITTEA
Sbjct: 461 DGSVIVGKVLEKEQYAYGFDSQSGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEA 520

Query: 247 MVAELPKKN 255
           M+AELPKKN
Sbjct: 521 MIAELPKKN 529


>ref|ZP_07028531.1| chaperonin GroEL [Afipia sp. 1NLS2]
 gb|EFI50521.1| chaperonin GroEL [Afipia sp. 1NLS2]
          Length = 546

 Score =  458 bits (1178), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/249 (91%), Positives = 243/249 (97%)

Query: 7   WXDRRKAILEDIAILTGGTAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVSGAGKKA 66
           + DRRKA+L+DIAILTGG AISEDLGIK+ENVTLQMLGRAKKVMIDKENTTIV+GAGKKA
Sbjct: 281 FGDRRKAMLQDIAILTGGQAISEDLGIKMENVTLQMLGRAKKVMIDKENTTIVNGAGKKA 340

Query: 67  DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 126
           DIEARVAQI+AQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM
Sbjct: 341 DIEARVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400

Query: 127 HATRAAVEEGILPGGGVALLRASEHLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGE 186
           HATRAAVEEGILPGGGVALLRASE LK ++T+NDDQKTGVEIVRKALSAPARQIAINAGE
Sbjct: 401 HATRAAVEEGILPGGGVALLRASEQLKRIKTQNDDQKTGVEIVRKALSAPARQIAINAGE 460

Query: 187 DGSVIVGKILEKDQYGYGFDSQSGEYGNLVTKGIIDPTKVVRVAIQNAASVAALLITTEA 246
           DGSVIVGK+LEKDQY YGFDSQ+GEYGNLV+KGIIDPTKVVR AIQNAASVA+LLITTEA
Sbjct: 461 DGSVIVGKVLEKDQYAYGFDSQTGEYGNLVSKGIIDPTKVVRAAIQNAASVASLLITTEA 520

Query: 247 MVAELPKKN 255
           M+AELPKKN
Sbjct: 521 MIAELPKKN 529


>ref|YP_001991446.1| chaperonin GroEL [Rhodopseudomonas palustris TIE-1]
 gb|ACF00971.1| chaperonin GroEL [Rhodopseudomonas palustris TIE-1]
          Length = 545

 Score =  457 bits (1176), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 230/249 (92%), Positives = 243/249 (97%)

Query: 7   WXDRRKAILEDIAILTGGTAISEDLGIKLENVTLQMLGRAKKVMIDKENTTIVSGAGKKA 66
           + DRRKA+L+DIAILTGG AISEDLGIK+ENVTLQMLGRAKKVMIDKENTTIV+GAGKKA
Sbjct: 281 FGDRRKAMLQDIAILTGGQAISEDLGIKMENVTLQMLGRAKKVMIDKENTTIVNGAGKKA 340

Query: 67  DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 126
           DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM
Sbjct: 341 DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAM 400

Query: 127 HATRAAVEEGILPGGGVALLRASEHLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGE 186
           HATRAAVEEGI+PGGGVALLRASE LKGL+TKNDDQKTGVEIVR+ALSAPARQIAINAGE
Sbjct: 401 HATRAAVEEGIVPGGGVALLRASEQLKGLKTKNDDQKTGVEIVRRALSAPARQIAINAGE 460

Query: 187 DGSVIVGKILEKDQYGYGFDSQSGEYGNLVTKGIIDPTKVVRVAIQNAASVAALLITTEA 246
           DGSVIVGK+LEK+QY +GFDSQSGEYG+LV KGIIDPTKVVR AIQNAASVAALLITTEA
Sbjct: 461 DGSVIVGKVLEKEQYAFGFDSQSGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEA 520

Query: 247 MVAELPKKN 255
           M+AELPKKN
Sbjct: 521 MIAELPKKN 529